mRNA_C-linearis_contig104.868.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_C-linearis_contig104.868.1 vs. uniprot
Match: A0A6H5JAJ0_9PHAE (OHCU_decarbox domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JAJ0_9PHAE)

HSP 1 Score: 295 bits (754), Expect = 5.030e-93
Identity = 145/171 (84.80%), Postives = 160/171 (93.57%), Query Frame = 3

Query:   39 MDALRRMPRPRLREELLRCCHCSEWADAVLGRMPFKSEKEARAALDDCWAKLTPADYLEAVAAHPAIGDKQALRDKFAPSRSGWEDDEQAAAAGASEAVFEELSKLNGEYRKKNGFVFLVCASGLPADAILALLKARLPNDRDTEIKNAVEEQRDITQLRFTRLLEEIAPP 551
            M+AL+ +PR  LR+ELLRCCH + WADAVLGRMPFKSE+EA+AA+DDCWAKL+PADYLEAVAAHPAIGDKQALRDKFAPSRSGWED EQAAAAGASEAV +ELS+LN EYR+KNGFVFLVCASG+PADAILALLKARLPNDRDTEI+NAVEEQR ITQLRF RLL EI+PP
Sbjct:    1 MEALQALPRHELRQELLRCCHSNAWADAVLGRMPFKSEEEAQAAMDDCWAKLSPADYLEAVAAHPAIGDKQALRDKFAPSRSGWEDKEQAAAAGASEAVLDELSELNEEYRQKNGFVFLVCASGMPADAILALLKARLPNDRDTEIRNAVEEQRKITQLRFARLLMEISPP 171

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BLAST of mRNA_C-linearis_contig104.868.1 vs. uniprot
Match: A0A2W4HVW3_9BACT (2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase n=1 Tax=Candidatus Melainabacteria bacterium TaxID=2052166 RepID=A0A2W4HVW3_9BACT)

HSP 1 Score: 137 bits (345), Expect = 6.560e-34
Identity = 75/166 (45.18%), Postives = 103/166 (62.05%), Query Frame = 3

Query:   39 MDALRRMPRPRLREELLRCCHCSEWADAVLGRMPFKSEKEARAALDDCWAKLTPADYLEAVAAHPAIG-DKQALRDKFAPSRSGWEDDEQAAAAGASEAVFEELSKLNGEYRKKNGFVFLVCASGLPADAILALLKARLPNDRDTEIKNAVEEQRDITQLRFTRLL 533
            ++ L         E+L RCC    W + +L R PF+S  E  +A DD W KL P D+LEA A HP IG D +ALR KFA S + W ++EQ   + A+E V   LSKLN EY +K G++F+VCA+G  A  +L +LK+RL ND+D E+K A  EQ  IT++R  +L+
Sbjct:    9 LETLNAKSASEAAEDLERCCGSRVWVEKMLSRRPFQSVDELFSAADDIWFKLAPEDWLEAFAHHPRIGGDVEALRAKFA-STASWAENEQKGVSQATEDVLHALSKLNDEYFEKYGYIFIVCATGKSARQMLDILKSRLLNDKDNELKVAAGEQAKITKIRLEKLI 173

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BLAST of mRNA_C-linearis_contig104.868.1 vs. uniprot
Match: UPI00199ADACE (2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase n=1 Tax=Candidatus Sericytochromatia bacterium TaxID=2762020 RepID=UPI00199ADACE)

HSP 1 Score: 135 bits (341), Expect = 2.020e-33
Identity = 75/166 (45.18%), Postives = 99/166 (59.64%), Query Frame = 3

Query:   39 MDALRRMPRPRLREELLRCCHCSEWADAVLGRMPFKSEKEARAALDDCWAKLTPADYLEAVAAHPAIGDKQALRDKFAPSRSGWEDDEQAAAAGASEAVFEELSKLNGEYRKKNGFVFLVCASGLPADAILALLKARLPNDRDTEIKNAVEEQRDITQLRFTRLLE 536
            ++AL  +  P  RE L RCC  S W D +L   PF ++     A D  WA    +D+LEA   +P IGD+ + R KFA S + W   EQ+ A+ A+EAV   LS  N  Y  K GF+F+VCA+G  AD +LALL+ARLPNDR TE++ A  EQ  IT LR  + L+
Sbjct:    4 VEALTGLTEPAWREMLTRCCGASHWVDGMLVLRPFSTDTALMKAADQVWAGTGESDWLEAFTHYPKIGDRDSRRQKFA-STAEWASHEQSGASAANEAVLTALSDGNLNYEAKFGFIFIVCATGKSADEMLALLQARLPNDRATELQIAAGEQHKITLLRLEKWLQ 168

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BLAST of mRNA_C-linearis_contig104.868.1 vs. uniprot
Match: A0A6L3EM52_9PROT (2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A6L3EM52_9PROT)

HSP 1 Score: 135 bits (340), Expect = 2.610e-33
Identity = 71/165 (43.03%), Postives = 98/165 (59.39%), Query Frame = 3

Query:   39 MDALRRMPRPRLREELLRCCHCSEWADAVLGRMPFKSEKEARAALDDCWAKLTPADYLEAVAAHPAIGDKQALRDKFAPSRSGWEDDEQAAAAGASEAVFEELSKLNGEYRKKNGFVFLVCASGLPADAILALLKARLPNDRDTEIKNAVEEQRDITQLRFTRLL 533
            +D+  R+P  ++R  L  CC  + W D +L R PF+   +   A  D W +++  D+LEA AAHP IGD  +LR+K+A +R      EQAA  GA      E+ +LN EY  + GF+F+V ASG  A  +L LLKAR+ N RD E++NA  EQ  IT LR  RL+
Sbjct:    3 VDSFNRLPEHQVRARLTDCCAAARWVDLMLARRPFRDAGDVARAARDAWMQMSTRDWLEAFAAHPRIGDIDSLREKYASTRE-MAGGEQAAVGGADVDTLREIGRLNREYENRFGFIFIVFASGKSAVEMLELLKARIDNTRDQELRNAAAEQLKITLLRLDRLV 166

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BLAST of mRNA_C-linearis_contig104.868.1 vs. uniprot
Match: A0A836Q8N7_9BACT (2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase n=1 Tax=Candidatus Melainabacteria bacterium TaxID=2052166 RepID=A0A836Q8N7_9BACT)

HSP 1 Score: 134 bits (338), Expect = 6.060e-33
Identity = 71/153 (46.41%), Postives = 100/153 (65.36%), Query Frame = 3

Query:   78 EELLRCCHCSEWADAVLGRMPFKSEKEARAALDDCWAKLTPADYLEAVAAHPAIG-DKQALRDKFAPSRSGWEDDEQAAAAGASEAVFEELSKLNGEYRKKNGFVFLVCASGLPADAILALLKARLPNDRDTEIKNAVEEQRDITQLRFTRLL 533
            E+L RCC    W + +L R PF S  E  +A DD W KL   D+LEA A HP IG D +ALR KFA S + W ++EQ   + A+E V  +L+KLN +Y +K G++F+VCA+G  A+ +L +LK RLPND++ E+K A  EQ  IT++R  +L+
Sbjct:   22 EDLERCCGSHAWVEKMLTRRPFHSVDELFSAADDIWFKLAAEDWLEAFAHHPRIGGDVEALRAKFA-STASWAENEQRGVSQATEDVLHQLAKLNDDYFEKYGYIFIVCATGKSAEEMLEILKGRLPNDKEKELKVAAGEQAKITKIRLEKLI 173

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BLAST of mRNA_C-linearis_contig104.868.1 vs. uniprot
Match: A0A6L7U330_9CHLR (2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase n=2 Tax=unclassified Caldilineaceae TaxID=1919254 RepID=A0A6L7U330_9CHLR)

HSP 1 Score: 133 bits (334), Expect = 2.220e-32
Identity = 73/170 (42.94%), Postives = 102/170 (60.00%), Query Frame = 3

Query:   36 AMDALRRMPRPRLREELLRCCHCSEWADAVLGRMPFKSEKEARAALDDCWAKLTPADYLEAVAAHPAIGDKQALRDKFAPSRSGWEDDEQAAAAGASEAVFEELSKLNGEYRKKNGFVFLVCASGLPADAILALLKARLPNDRDTEIKNAVEEQRDITQLRFTRLLEEIA 545
            A  AL R+P  R  E L RCC    W  +++ R+PF   +  R+  D+ W  L   D+LEA A HP IGD  +LR +FA +R+ W + EQ+   GASE V   L+  N  Y ++ G++F+VCA+G  A+A+L LL+ RL N  D E+  A E+QR I QLR  +L EE+A
Sbjct:    5 ATVALNRLPAARQAELLERCCGSERWVQSMVQRIPFADWQALRSEADEIWLGLDRDDWLEAFAHHPRIGDIDSLRARFATTRN-WSEGEQSGVDGASEEVLAGLAAGNRRYEQRFGYIFIVCATGKSAEAMLELLQERLGNSPDDELPIAAEQQRQIMQLRLDKLREELA 173

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BLAST of mRNA_C-linearis_contig104.868.1 vs. uniprot
Match: A0A848LKZ2_9DELT (2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase n=3 Tax=Pyxidicoccus TaxID=224458 RepID=A0A848LKZ2_9DELT)

HSP 1 Score: 132 bits (331), Expect = 4.810e-32
Identity = 71/165 (43.03%), Postives = 95/165 (57.58%), Query Frame = 3

Query:   39 MDALRRMPRPRLREELLRCCHCSEWADAVLGRMPFKSEKEARAALDDCWAKLTPADYLEAVAAHPAIGDKQALRDKFAPSRSGWEDDEQAAAAGASEAVFEELSKLNGEYRKKNGFVFLVCASGLPADAILALLKARLPNDRDTEIKNAVEEQRDITQLRFTRLL 533
            ++ L +M     R ELLRCC  S WAD ++   PF+  +   A     W +  P D+ EA+  HP IGD   LR KFA S + W   EQ    GA EAV + L+  N EY ++ GF+FLVCA+G  A  +LALL+ RL N  D E++ A EEQ  IT++R  +LL
Sbjct:    4 LERLNKMMSSEARAELLRCCGSSRWADGMVRSRPFRDAEHLLAEAAWLWKQTGPEDWREAITHHPRIGDVSQLRAKFA-STATWSSQEQGGVVGADEAVLQGLADGNAEYERRFGFIFLVCATGKSAAEMLALLRERLDNSPDEELRIAAEEQAKITRIRLEKLL 167

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BLAST of mRNA_C-linearis_contig104.868.1 vs. uniprot
Match: A0A4Q5NTB6_9BACT (2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase n=1 Tax=bacterium TaxID=1869227 RepID=A0A4Q5NTB6_9BACT)

HSP 1 Score: 132 bits (331), Expect = 5.260e-32
Identity = 69/153 (45.10%), Postives = 99/153 (64.71%), Query Frame = 3

Query:   78 EELLRCCHCSEWADAVLGRMPFKSEKEARAALDDCWAKLTPADYLEAVAAHPAIGDKQALRDKFAPSRSGWEDDEQAAAAGASEAVFEELSKLNGEYRKKNGFVFLVCASGLPADAILALLKARLPNDRDTEIKNAVEEQRDITQLRFTRLLE 536
            +ELLRCC  S+W   V+   PF + +      ++   KL   D+LEA A HP IGD  +LR KFA + S W  +EQA    ASEA  + L++ N +Y  K GF+F++CA+G  AD +LA+L+ RL ND++TE++NA E+Q+ IT+LR  +LLE
Sbjct:   20 DELLRCCGASKWVLIVMNGRPFANVETLYTRSEEALNKLDHTDWLEAFAHHPKIGDIDSLRSKFATT-STWAGNEQAGTNAASEATLQALAQGNTDYEDKFGFIFIICATGKSADEMLAVLQTRLNNDKETELQNAAEQQKQITRLRLGKLLE 171

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BLAST of mRNA_C-linearis_contig104.868.1 vs. uniprot
Match: UPI00098774F1 (2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase n=1 Tax=Pseudocolwellia agarivorans TaxID=1911682 RepID=UPI00098774F1)

HSP 1 Score: 132 bits (331), Expect = 6.440e-32
Identity = 68/169 (40.24%), Postives = 103/169 (60.95%), Query Frame = 3

Query:   36 AMDALRRMPRPRLREELLRCCHCSEWADAVLGRMPFKSEKEARAALDDCWAKLTPADYLEAVAAHPAIGDKQALRDKFAPSRSGWEDDEQAAAAGASEAVFEELSKLNGEYRKKNGFVFLVCASGLPADAILALLKARLPNDRDTEIKNAVEEQRDITQLRFTRLLEEI 542
            A+D L  +P        ++CC  S+W + +L  +P   + +     ++ W  LT  DYLEA   HP IGD  +LR K+A +++     EQ+A   A+E V  +L+K N +Y +K GF+F+VCA+G  A+ +L LL+ RLPN+R TE+ NAVEEQR I Q+R  ++LE +
Sbjct:    6 AIDTLNALPENDALHVFMQCCTSSKWVERMLNSLPVADKAQLVNLANEHWKNLTEKDYLEAFEGHPKIGDVNSLRAKYANTKA-LASGEQSAVDNANETVLTQLAKGNDDYLQKFGFIFIVCATGKSAEEMLTLLQQRLPNNRQTELVNAVEEQRKIFQIRIDKMLEHL 173

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BLAST of mRNA_C-linearis_contig104.868.1 vs. uniprot
Match: A0A7S3XGY5_OXYMA (Hypothetical protein n=1 Tax=Oxyrrhis marina TaxID=2969 RepID=A0A7S3XGY5_OXYMA)

HSP 1 Score: 129 bits (325), Expect = 2.320e-31
Identity = 64/152 (42.11%), Postives = 92/152 (60.53%), Query Frame = 3

Query:   75 REELLRCCHCSEWADAVLGRMPFKSEKEARAALDDCWAKLTPADYLEAVAAHPAIGDKQALRDKFAPSRSGWEDDEQAAAAGASEAVFEELSKLNGEYRKKNGFVFLVCASGLPADAILALLKARLPNDRDTEIKNAVEEQRDITQLRFTRL 530
            R++ L  CH S+WA  ++ R PF+ +        + W  L   D+LEA   HP IGD ++LR K+  +       EQ+  +GASE V + L+K N +Y +KNGF+F+VCASG  A  +L +L++RLPN RD E++NA  EQ  IT LR  +L
Sbjct:    1 RDKFLETCHSSKWAAGMVARRPFEDDAALLKGAQEVWDSLGEEDWLEAFRGHPKIGDAESLRKKYHGNSGALSSVEQSGVSGASEEVIQALAKGNQDYEEKNGFIFIVCASGKSASEMLEILQSRLPNGRDQELQNAAAEQAKITALRLQKL 152

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig104.868.1 vs. uniprot

BLAST of mRNA_C-linearis_contig104.868.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
A0A6H5JAJ0_9PHAE	5.030e-93	84.80	OHCU_decarbox domain-containing protein n=2 Tax=Ec...	[more]
A0A2W4HVW3_9BACT	6.560e-34	45.18	2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline deca...	[more]
UPI00199ADACE	2.020e-33	45.18	2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline deca...	[more]
A0A6L3EM52_9PROT	2.610e-33	43.03	2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline deca...	[more]
A0A836Q8N7_9BACT	6.060e-33	46.41	2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline deca...	[more]
A0A6L7U330_9CHLR	2.220e-32	42.94	2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline deca...	[more]
A0A848LKZ2_9DELT	4.810e-32	43.03	2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline deca...	[more]
A0A4Q5NTB6_9BACT	5.260e-32	45.10	2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline deca...	[more]
UPI00098774F1	6.440e-32	40.24	2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline deca...	[more]
A0A7S3XGY5_OXYMA	2.320e-31	42.11	Hypothetical protein n=1 Tax=Oxyrrhis marina TaxID...	[more]

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Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	293.9
Seed ortholog evalue	5.8e-77
Seed eggNOG ortholog	2880.D7FIQ6
KEGG rclass	RC01551,RC03393
KEGG ko	ko:K07127,ko:K13484
KEGG TC	9.B.35.1.2,9.B.35.1.3,9.B.35.2
KEGG Reaction	R06601,R06604
KEGG Pathway	ko00230,ko01100,ko01120,map00230,map01100,map01120
KEGG Module	M00546
Hectar predicted targeting category	other localisation
GOs	GO:0000255,GO:0001558,GO:0001560,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005829,GO:0005886,GO:0006139,GO:0006144,GO:0006725,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009605,GO:0009719,GO:0009725,GO:0009741,GO:0009742,GO:0009755,GO:0009898,GO:0009987,GO:0009991,GO:0010033,GO:0014070,GO:0016020,GO:0016043,GO:0016787,GO:0016810,GO:0016812,GO:0016829,GO:0016830,GO:0016831,GO:0017144,GO:0018130,GO:0019428,GO:0019897,GO:0019898,GO:0022607,GO:0023052,GO:0031234,GO:0031668,GO:0032870,GO:0033971,GO:0033993,GO:0034641,GO:0040008,GO:0042221,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043401,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046483,GO:0048545,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0051716,GO:0051997,GO:0055086,GO:0065003,GO:0065007,GO:0070887,GO:0071310,GO:0071367,GO:0071383,GO:0071396,GO:0071407,GO:0071495,GO:0071496,GO:0071704,GO:0071840,GO:0071944,GO:0072521,GO:0098552,GO:0098562,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1901701
EggNOG free text desc.	thyroid hormone binding
EggNOG OGs	COG2351@1,KOG3006@2759
EC	3.5.2.17,4.1.1.97
COG Functional cat.	A
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko00002,ko01000,ko02000
Exons	6
Model size	1981
Cds size	606
Stop	1
Start	1