mRNA_C-linearis_contig102.810.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_C-linearis_contig102.810.1 vs. uniprot
Match: A0A6H5JAT0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAT0_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 1.150e-22
Identity = 44/77 (57.14%), Postives = 59/77 (76.62%), Query Frame = 1

Query:    4 GRVHFYKAAKAPDASTCEYHLKKIEELNPVAGKKMGAVPRPTWAMHATRGNVVWDQVTSNMSESTNHAMGAETRAKP 234
            GR+HFY+AA+APD +TCE+HL KI++LN  A +K+ +  R  WA++ATRGNVV DQV SNM+ES NHA+G +    P
Sbjct:  311 GRMHFYQAARAPDKATCEFHLNKIKDLNTAAYEKVASASREKWAVYATRGNVVRDQVNSNMAESLNHALGPDVLPAP 387

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BLAST of mRNA_C-linearis_contig102.810.1 vs. uniprot
Match: A0A6H5JN60_9PHAE (SWIM-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN60_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 2.780e-22
Identity = 49/89 (55.06%), Postives = 61/89 (68.54%), Query Frame = 1

Query:   19 YKAAKAPDASTCEYHLKKIEELNPVAGKKMGAVPRPTWAMHATRGNVVWDQVTSNMSESTNHAMGAETRAKPVLDLVQDIVMQSAAKVA 285
            Y+AA+A D +TCE ++ KI  LNP AGK +   PR  WAM+ATRGNVV DQVTSNMSE+ N+ MG +TR+K  LD   D   Q   K+A
Sbjct:    2 YEAARATDKATCEANIDKIAALNPAAGKYIRLQPRHEWAMYATRGNVVQDQVTSNMSETANNMMGPDTRSKAPLDFFMDTAFQGLDKLA 90

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BLAST of mRNA_C-linearis_contig102.810.1 vs. uniprot
Match: A0A6H5KPK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPK8_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 8.100e-17
Identity = 38/67 (56.72%), Postives = 50/67 (74.63%), Query Frame = 1

Query:   19 YKAAKAPDASTCEYHLKKIEELNPVAGKKMGAVPRPTWAMHATRGNVVWDQVTSNMSESTNHAMGAE 219
            Y+AA+A D +TCE ++ KI  LNP AG+ +   PR  WAM+ATRGNVV DQVTSNMSE+ N+ +G +
Sbjct:    2 YEAARATDKATCEANIDKIAALNPAAGEYIRLQPRHEWAMYATRGNVVQDQVTSNMSETANNMIGPD 68

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BLAST of mRNA_C-linearis_contig102.810.1 vs. uniprot
Match: A0A6H5KFP9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFP9_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 1.050e-16
Identity = 39/67 (58.21%), Postives = 49/67 (73.13%), Query Frame = 1

Query:   19 YKAAKAPDASTCEYHLKKIEELNPVAGKKMGAVPRPTWAMHATRGNVVWDQVTSNMSESTNHAMGAE 219
            Y+AA+A D +TCE ++ KI  LNP AGK +    R  WAM+ATRGNVV DQVTSNMSE+ N+ MG +
Sbjct:    2 YEAARATDKATCEANIDKIAALNPAAGKYIRLQTRHEWAMYATRGNVVQDQVTSNMSETANNMMGPD 68

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BLAST of mRNA_C-linearis_contig102.810.1 vs. uniprot
Match: A0A6H5JA84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA84_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 1.940e-15
Identity = 34/70 (48.57%), Postives = 47/70 (67.14%), Query Frame = 1

Query:   64 LKKIEELNPVAGKKMGAVPRPTWAMHATRGNVVWDQVTSNMSESTNHAMGAETRAKPVLDLVQDIVMQSA 273
            + +++ LNP A KK+   P  TWA +A + NV+WDQ TSN SES N  +G ETR+K VL  + DIV+ +A
Sbjct:    1 MNEVQNLNPAAFKKLNDTPHNTWANYACKNNVIWDQTTSNFSESLNKLIGEETRSKSVLGFMHDIVLLTA 70

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig102.810.1 vs. uniprot

BLAST of mRNA_C-linearis_contig102.810.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5

ZOOM

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POSITION

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Match Name	E-value	Identity	Description
A0A6H5JAT0_9PHAE	1.150e-22	57.14	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JN60_9PHAE	2.780e-22	55.06	SWIM-type domain-containing protein n=2 Tax=Ectoca...	[more]
A0A6H5KPK8_9PHAE	8.100e-17	56.72	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KFP9_9PHAE	1.050e-16	58.21	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JA84_9PHAE	1.940e-15	48.57	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]