mRNA_C-linearis_contig102.804.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig102.804.1

>prot_C-linearis_contig102.804.1 ID=prot_C-linearis_contig102.804.1|Name=mRNA_C-linearis_contig102.804.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=752bp
MEGLEGNAHTDSRVVKEMGPSTKIALAPFVQGEPSVHLLDQDGKASAARD
RSPEDDFQMAAQSLGVGPTDESVPEGEGTGGDNQTRDPSAHAGDEKAEGD
GATGSGATKEAASPPEHPLQKAITSFDMALGELNQLVHLVDLGRAGEFMV
LKRVTPTEEDQATAMPDQSARPGDGVPREALPTMVNVKRSQLKGAAEQLR
KRAKRLRETSKVQKIFQQGVMHLRKSWRIIAPNHGKVNVPLQVGEALCVD
CSFGSAGGRPVPNTAAAGSRHRHPWLFQLTCSEGGQLKAQPSSRQHLKAL
EVQLVSVVTGACEHSLRASFPACSDGGDNAVAGAVAGEERRAEPPSVSNG
GGTPEAGGLGDFQIQMDELEVHISRQQHSVFWEEVFETLKAEALVDGRDG
WLVRQDARCGDDVGANRTVVPDVVARMDAGAGAKRRLVSLSPRGTSIPGR
TAGARVVHVLDDEVMVEMNSHFQLGYRLVSGKCSSGARAEASCTAEKDRS
EASERTQAASLCQLALLYCGSLIRQQQRAQVVARRGSGSNSGVGREVGAR
IPAGAAGGKVGNGAAGGHLSAASTWKAVRRVLLHHLFRSEVVQGLADVSR
TLRKIGLPLAVRWTHLEETCPSSTLSFTFGHCFHFRASLGDGFGVVVSAL
PGLQNHADQRSVELESALDLEHFLLGEVCRQIVLTFGDVTAAWTSGIQRE
RIICFRVDLVPAAIHLLPVSKSKVSRNNAPEEADGGSCEVRVFVEEVGDD
R*
back to top

mRNA from alignment at C-linearis_contig102:525247..528874+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig102.804.1 ID=mRNA_C-linearis_contig102.804.1|Name=mRNA_C-linearis_contig102.804.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3628bp|location=Sequence derived from alignment at C-linearis_contig102:525247..528874+ (Chordaria linearis ClinC8C monoicous)
GGGGGTTCCAAAGGTCCTATATATCCATATACCTTTGGGGGGCGCTGGCC
TTCTCCGCCGCTCTCTCTTCTGTCCACAGGGATGGAAGGTTTGGAAGGAA
ACGCCCACACCGACAGCAGGGTAGTAAAGGAGATGGGCCCTTCGACGAAA
ATCGCGCTCGCGCCGTTCGTTCAGGGGGAACCCTCGGTGCACTTGCTCGA
CCAGGATGGGAAAGCATCCGCGGCCAGGTGAGTCTTTCAAAACAACCGTT
TGATCATCTCAACCCCTCCGTGCGCACGCTACATCTCGTGCATCTCGGGT
CTCGGCTGATGTTGCGTTTATTTTGGTTCTTGCACGTTTCTAGCGTTGCA
AGCTTTGTGGGGTGTGGTACAACTTCCCCGCCCAAAGTCATGACTACAGC
CTCTCACGACACGACACGCTCAACCGCCTTTTTCCAGGGATCGATCTCCT
GAGGACGACTTTCAGATGGCGGCCCAGAGCCTTGGCGTCGGCCCCACCGA
CGAAAGTGTGCCGGAAGGGGAAGGCACGGGGGGTGACAATCAGACCCGAG
ACCCGAGTGCACATGCTGGCGACGAGAAGGCTGAAGGAGATGGGGCCACT
GGGAGCGGAGCCACTAAGGAAGCCGCATCTCCACCGGAACACCCCCTGCA
GAAAGCCATCACCTCATTCGACATGGCCCTCGGAGAGCTCAACCAGCTAG
TCCACCTTGTCGATCTGGGTCGGGCTGGGGAATTTATGGTCTTGAAGAGG
GTGACACCGACCGAAGAAGACCAGGCCACGGCAATGCCCGATCAGTCCGT
GAGCATCCTGTTGTGTTGCATTACATTTTGGAAGGATACTACTCTCTCAG
TATATTTTATCCGTAGAGAGAGCCAACAGCACGCCCCACCATTATTTTGA
CCTCACCGCCCCGTTAAAGCCCGTGGCGTCGTTTGCATTTTCGAGCTCCC
TCTCCTCTCCGCTTGGTCTAGAAACATCTTGTTGATCAACTTAAATGCTG
TAACCTCTCGCGAGGTAAAGTTTGCGCGTTTGCACCGGGAGTTGTGCCAA
CAATGACTCGGACGCTGAACGCTGATGAGACCCAAAGGGTTTCGTAGCAG
ATCACGCGTTTTGTAGGTGCGCATGAAGCATGGAGCCAATCATATGCTGT
CGTTTGTGCTTTCACGCAGGCGAGACCTGGTGACGGTGTACCCCGTGAAG
CTCTCCCGACGATGGTAAACGTCAAAAGGAGCCAGTTGAAAGGGGCGGCC
GAGCAGCTGCGCAAGCGAGCTAAGAGATTACGAGAGACATCCAAAGTACA
GAAGATCTTTCAGCAAGGCGTCATGCATCTTAGGAAGAGCTGGAGAATAA
TAGCCCCGAACCATGGCAAGGTATGTATATGATACGTGGTACATGATGCA
TGCAGCAGCACAGCGAGAATTCGTGGACGGTCATGGCGAACTGGCCGTGT
GCTGTGATCATTCAACGGAGATGTCGCATATGTAGGCCCTACTTTCTTTG
AAGCTGCACTTCGTTTGCTTCCCTTAACCACTGCTATAAGGCAAGGTTGG
TCCGGAGCGCATCCGATAACGTTGCATATCTTGGTGTTTCGTCCATTGTC
GCTGTCAATCAAGGTCAATGTGCCGCTGCAAGTGGGCGAGGCGCTGTGTG
TTGACTGCAGTTTCGGGAGTGCCGGTGGGCGACCTGTGCCGAATACCGCA
GCGGCCGGTAGCCGACACAGGCATCCGTGGCTATTCCAGCTTACGTGCAG
CGAGGGCGGGCAGCTGAAGGCGCAACCCTCGAGCAGGCAGCACCTGAAGG
CGTTGGAAGTGCAGCTTGTATCGGTTGTAACCGGGGCGTGCGAACATTCC
TTGAGGGCTAGCTTCCCTGCATGTAGCGATGGGGGCGACAACGCTGTCGC
TGGAGCTGTCGCGGGAGAGGAAAGAAGGGCAGAACCACCATCGGTGAGCA
ACGGAGGGGGGACGCCCGAGGCGGGGGGATTGGGTGACTTTCAGATCCAG
ATGGATGAGCTCGAGGTGCACATATCTCGTCAACAACATAGCGTGTTTTG
GGAGGAGGTATTCGAGACTCTCAAAGCAGAGGCTCTGGTGGACGGCAGGG
ATGGCTGGCTGGTTCGTCAAGATGCAAGGTGCGGCGATGATGTTGGCGCC
AACCGTACGGTGGTGCCTGACGTGGTGGCAAGGATGGACGCAGGAGCAGG
AGCAAAGCGAAGATTAGTAAGCTTGAGCCCGCGAGGGACGAGCATTCCCG
GAAGAACCGCTGGGGCGCGTGTGGTTCACGTGTTGGACGACGAAGTCATG
GTGGAGATGAACAGCCACTTTCAGTTGGGGTATAGATTGGTGTCGGGCAA
GTGTTCGTCGGGAGCGCGTGCCGAAGCCAGTTGTACTGCGGAGAAGGACA
GATCTGAGGCAAGCGAAAGGACGCAGGCGGCATCGCTCTGCCAGCTGGCA
TTGTTGTATTGCGGCAGTCTTATTCGCCAACAGCAACGAGCCCAGGTGGT
TGCACGACGGGGCTCTGGTTCAAACAGCGGGGTCGGCCGGGAAGTGGGAG
CGCGAATTCCCGCTGGTGCAGCAGGGGGCAAAGTGGGCAATGGGGCGGCA
GGGGGGCACTTGTCGGCCGCGAGCACTTGGAAGGCAGTGAGACGAGTGTT
GTTGCACCATCTTTTTCGCTCGGAGGTCAGTACGCATCACCAGTCCATAG
CTACCGTTGTGGCAGCAGTATGATAGCATCAATAGTTGCGCACAACATCA
GTCGTTGCGCACAACACTTGCATGTTGGGGCCTTTGCACCCGCGTTGGCT
CTTTGATAAATTTTGTCCGTTCAGAAAGCGGTGCGATGTGTCGGGCTTGG
ACGTGTTACTGCTGTAAATTATGCACACGTAGTCGGGGTGTATCCCAACG
CTCATTTCTTTCGCATCCGTTTGTACTCGCTGTCGTTGGATAACTTCTGC
ACCAAGCAGGTTGTTCAGGGGCTGGCTGACGTGAGTCGAACTCTCCGAAA
GATTGGTCTTCCGTTAGCGGTGCGATGGACGCATTTGGAGGAGACCTGCC
CCTCTAGTACTCTAAGCTTCACTTTCGGGCATTGCTTTCACTTCAGAGCG
TCCCTGGGCGACGGATTCGGGGTTGTCGTGAGCGCACTCCCTGGGCTGCA
AAATCACGCAGATCAGCGAAGCGTGGAGTTGGAGTCTGCACTCGATCTTG
AGCATTTTCTGCTTGGTGAGGTGTGTCGCCAAATCGTGCTCACATTTGGA
GACGTCACTGCGGCGTGGACAAGCGGCATTCAGCGGGAGAGGATAATTTG
TTTCAGGGTCGATCTCGTGCCAGCCGCAATTCATCTGTTGCCAGTTTCGA
AATCGAAGGTATCTCGCAATAACGCTCCAGAGGAGGCCGATGGAGGGAGC
TGCGAGGTTCGAGTTTTCGTTGAAGAGGTGGGGGATGATCGCTGATTCGA
GTGTCCCATCCTTGTGGTGTCGCCAGTGTGAAAAACATTCGACAAACCAT
TTGAGAAACGCCAACAAAAATATTGTGGAAAAGAAAAACAACCCGCCGTC
CATGATAGCTGTTGCTTAATGTGGATGGTGTTTTAGGTATTTTGGGTTCC
GATCTTGAGACATGCGCGAACAAATCAG
back to top

Coding sequence (CDS) from alignment at C-linearis_contig102:525247..528874+

>mRNA_C-linearis_contig102.804.1 ID=mRNA_C-linearis_contig102.804.1|Name=mRNA_C-linearis_contig102.804.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=4512bp|location=Sequence derived from alignment at C-linearis_contig102:525247..528874+ (Chordaria linearis ClinC8C monoicous)
ATGGAAGGTTTGGAAGGAAACGCCCACACCGACAGCAGGGTAGTAAAGGA
GATGGGCCCTTCGACGAAAATCGCGCTCGCGCCGTTCGTTCAGGGGGAAC
CCTCGGTGCACTTGCTCGACCAGGATGGGAAAGCATCCGCGGCCAGATGG
AAGGTTTGGAAGGAAACGCCCACACCGACAGCAGGGTAGTAAAGGAGATG
GGCCCTTCGACGAAAATCGCGCTCGCGCCGTTCGTTCAGGGGGAACCCTC
GGTGCACTTGCTCGACCAGGATGGGAAAGCATCCGCGGCCAGGGATCGAT
CTCCTGAGGACGACTTTCAGATGGCGGCCCAGAGCCTTGGCGTCGGCCCC
ACCGACGAAAGTGTGCCGGAAGGGGAAGGCACGGGGGGTGACAATCAGAC
CCGAGACCCGAGTGCACATGCTGGCGACGAGAAGGCTGAAGGAGATGGGG
CCACTGGGAGCGGAGCCACTAAGGAAGCCGCATCTCCACCGGAACACCCC
CTGCAGAAAGCCATCACCTCATTCGACATGGCCCTCGGAGAGCTCAACCA
GCTAGTCCACCTTGTCGATCTGGGTCGGGCTGGGGAATTTATGGTCTTGA
AGAGGGTGACACCGACCGAAGAAGACCAGGCCACGGCAATGCCCGATCAG
TCCGGATCGATCTCCTGAGGACGACTTTCAGATGGCGGCCCAGAGCCTTG
GCGTCGGCCCCACCGACGAAAGTGTGCCGGAAGGGGAAGGCACGGGGGGT
GACAATCAGACCCGAGACCCGAGTGCACATGCTGGCGACGAGAAGGCTGA
AGGAGATGGGGCCACTGGGAGCGGAGCCACTAAGGAAGCCGCATCTCCAC
CGGAACACCCCCTGCAGAAAGCCATCACCTCATTCGACATGGCCCTCGGA
GAGCTCAACCAGCTAGTCCACCTTGTCGATCTGGGTCGGGCTGGGGAATT
TATGGTCTTGAAGAGGGTGACACCGACCGAAGAAGACCAGGCCACGGCAA
TGCCCGATCAGTCCGCGAGACCTGGTGACGGTGTACCCCGTGAAGCTCTC
CCGACGATGGTAAACGTCAAAAGGAGCCAGTTGAAAGGGGCGGCCGAGCA
GCTGCGCAAGCGAGCTAAGAGATTACGAGAGACATCCAAAGTACAGAAGA
TCTTTCAGCAAGGCGTCATGCATCTTAGGAAGAGCTGGAGAATAATAGCC
CCGAACCATGGCAAGGCGAGACCTGGTGACGGTGTACCCCGTGAAGCTCT
CCCGACGATGGTAAACGTCAAAAGGAGCCAGTTGAAAGGGGCGGCCGAGC
AGCTGCGCAAGCGAGCTAAGAGATTACGAGAGACATCCAAAGTACAGAAG
ATCTTTCAGCAAGGCGTCATGCATCTTAGGAAGAGCTGGAGAATAATAGC
CCCGAACCATGGCAAGGTCAATGTGCCGCTGCAAGTGGGCGAGGCGCTGT
GTGTTGACTGCAGTTTCGGGAGTGCCGGTGGGCGACCTGTGCCGAATACC
GCAGCGGCCGGTAGCCGACACAGGCATCCGTGGCTATTCCAGCTTACGTG
CAGCGAGGGCGGGCAGCTGAAGGCGCAACCCTCGAGCAGGCAGCACCTGA
AGGCGTTGGAAGTGCAGCTTGTATCGGTTGTAACCGGGGCGTGCGAACAT
TCCTTGAGGGCTAGCTTCCCTGCATGTAGCGATGGGGGCGACAACGCTGT
CGCTGGAGCTGTCGCGGGAGAGGAAAGAAGGGCAGAACCACCATCGGTGA
GCAACGGAGGGGGGACGCCCGAGGCGGGGGGATTGGGTGACTTTCAGATC
CAGATGGATGAGCTCGAGGTGCACATATCTCGTCAACAACATAGCGTGTT
TTGGGAGGAGGTATTCGAGACTCTCAAAGCAGAGGCTCTGGTGGACGGCA
GGGATGGCTGGCTGGTTCGTCAAGATGCAAGGTGCGGCGATGATGTTGGC
GCCAACCGTACGGTGGTGCCTGACGTGGTGGCAAGGATGGACGCAGGAGC
AGGAGCAAAGCGAAGATTAGTAAGCTTGAGCCCGCGAGGGACGAGCATTC
CCGGAAGAACCGCTGGGGCGCGTGTGGTTCACGTGTTGGACGACGAAGTC
ATGGTGGAGATGAACAGCCACTTTCAGTTGGGGTATAGATTGGTGTCGGG
CAAGTGTTCGTCGGGAGCGCGTGCCGAAGCCAGTTGTACTGCGGAGAAGG
ACAGATCTGAGGCAAGCGAAAGGACGCAGGCGGCATCGCTCTGCCAGCTG
GCATTGTTGTATTGCGGCAGTCTTATTCGCCAACAGCAACGAGCCCAGGT
GGTTGCACGACGGGGCTCTGGTTCAAACAGCGGGGTCGGCCGGGAAGTGG
GAGCGCGAATTCCCGCTGGTGCAGCAGGGGGCAAAGTGGGCAATGGGGCG
GCAGGGGGGCACTTGTCGGCCGCGAGCACTTGGAAGGCAGTGAGACGAGT
GTTGTTGCACCATCTTTTTCGCTCGGAGGTCAATGTGCCGCTGCAAGTGG
GCGAGGCGCTGTGTGTTGACTGCAGTTTCGGGAGTGCCGGTGGGCGACCT
GTGCCGAATACCGCAGCGGCCGGTAGCCGACACAGGCATCCGTGGCTATT
CCAGCTTACGTGCAGCGAGGGCGGGCAGCTGAAGGCGCAACCCTCGAGCA
GGCAGCACCTGAAGGCGTTGGAAGTGCAGCTTGTATCGGTTGTAACCGGG
GCGTGCGAACATTCCTTGAGGGCTAGCTTCCCTGCATGTAGCGATGGGGG
CGACAACGCTGTCGCTGGAGCTGTCGCGGGAGAGGAAAGAAGGGCAGAAC
CACCATCGGTGAGCAACGGAGGGGGGACGCCCGAGGCGGGGGGATTGGGT
GACTTTCAGATCCAGATGGATGAGCTCGAGGTGCACATATCTCGTCAACA
ACATAGCGTGTTTTGGGAGGAGGTATTCGAGACTCTCAAAGCAGAGGCTC
TGGTGGACGGCAGGGATGGCTGGCTGGTTCGTCAAGATGCAAGGTGCGGC
GATGATGTTGGCGCCAACCGTACGGTGGTGCCTGACGTGGTGGCAAGGAT
GGACGCAGGAGCAGGAGCAAAGCGAAGATTAGTAAGCTTGAGCCCGCGAG
GGACGAGCATTCCCGGAAGAACCGCTGGGGCGCGTGTGGTTCACGTGTTG
GACGACGAAGTCATGGTGGAGATGAACAGCCACTTTCAGTTGGGGTATAG
ATTGGTGTCGGGCAAGTGTTCGTCGGGAGCGCGTGCCGAAGCCAGTTGTA
CTGCGGAGAAGGACAGATCTGAGGCAAGCGAAAGGACGCAGGCGGCATCG
CTCTGCCAGCTGGCATTGTTGTATTGCGGCAGTCTTATTCGCCAACAGCA
ACGAGCCCAGGTGGTTGCACGACGGGGCTCTGGTTCAAACAGCGGGGTCG
GCCGGGAAGTGGGAGCGCGAATTCCCGCTGGTGCAGCAGGGGGCAAAGTG
GGCAATGGGGCGGCAGGGGGGCACTTGTCGGCCGCGAGCACTTGGAAGGC
AGTGAGACGAGTGTTGTTGCACCATCTTTTTCGCTCGGAGGTTGTTCAGG
GGCTGGCTGACGTGAGTCGAACTCTCCGAAAGATTGGTCTTCCGTTAGCG
GTGCGATGGACGCATTTGGAGGAGACCTGCCCCTCTAGTACTCTAAGCTT
CACTTTCGGGCATTGCTTTCACTTCAGAGCGTCCCTGGGCGACGGATTCG
GGGTTGTCGTGAGCGCACTCCCTGGGCTGCAAAATCACGCAGATCAGCGA
AGCGTGGAGTTGGAGTCTGCACTCGATCTTGAGCATTTTCTGCTTGGTGA
GGTGTGTCGCCAAATCGTGCTCACATTTGGAGACGTCACTGCGGCGTGGA
CAAGCGGCATTCAGCGGGAGAGGATAATTTGTTTCAGGGTCGATCTCGTG
CCAGCCGCAATTCATCTGTTGCCAGTTTCGAAATCGAAGGTATCTCGCAA
TAACGCTCCAGAGGAGGCCGATGGAGGGAGCTGCGAGGTTCGAGTTTTCG
TTGAAGAGGTGGGGGATGATCGCTGAGTTGTTCAGGGGCTGGCTGACGTG
AGTCGAACTCTCCGAAAGATTGGTCTTCCGTTAGCGGTGCGATGGACGCA
TTTGGAGGAGACCTGCCCCTCTAGTACTCTAAGCTTCACTTTCGGGCATT
GCTTTCACTTCAGAGCGTCCCTGGGCGACGGATTCGGGGTTGTCGTGAGC
GCACTCCCTGGGCTGCAAAATCACGCAGATCAGCGAAGCGTGGAGTTGGA
GTCTGCACTCGATCTTGAGCATTTTCTGCTTGGTGAGGTGTGTCGCCAAA
TCGTGCTCACATTTGGAGACGTCACTGCGGCGTGGACAAGCGGCATTCAG
CGGGAGAGGATAATTTGTTTCAGGGTCGATCTCGTGCCAGCCGCAATTCA
TCTGTTGCCAGTTTCGAAATCGAAGGTATCTCGCAATAACGCTCCAGAGG
AGGCCGATGGAGGGAGCTGCGAGGTTCGAGTTTTCGTTGAAGAGGTGGGG
GATGATCGCTGA
back to top