Homology
BLAST of mRNA_C-linearis_contig102.779.1 vs. uniprot
Match:
A0A7S1UA59_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UA59_9STRA)
HSP 1 Score: 72.8 bits (177), Expect = 1.960e-12
Identity = 39/84 (46.43%), Postives = 55/84 (65.48%), Query Frame = 2
Query: 155 RGSAPEMHPLVRNLCKRFILAARRHPSGEAWFKEKVRQALQRNALLTSYEDVKRAVARGRQVVRDSEEFSQFSRYRAMRRRYSD 406
RG MHPLVR+L KRF+L R +P+G A + + + A+ NA LT ++KRAVA+GR +VR+ Q +YRAMR+RY +
Sbjct: 22 RGPPRRMHPLVRDLYKRFLLVGREYPTGLADVRARAKAAILANAHLTEEVEIKRAVAKGRYMVREMYAVMQLKKYRAMRKRYEE 105
BLAST of mRNA_C-linearis_contig102.779.1 vs. uniprot
Match:
A0A8J5XPH7_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XPH7_DIALT)
HSP 1 Score: 69.3 bits (168), Expect = 1.790e-11
Identity = 36/79 (45.57%), Postives = 53/79 (67.09%), Query Frame = 2
Query: 173 MHPLVRNLCKRFILAARRHPSGEAWFKEKVRQALQRNALLTSYEDVKRAVARGRQVVRDSEEFSQFSRYRAMRRRYSDP 409
MHPLVR+L KRF+L + +P G A + K ++AL+ A L ++KRAVARGR +VR+ + + +YR M++RYS P
Sbjct: 1 MHPLVRDLYKRFLLVGKDYPGGLALVRRKAKEALRNQAHLQDELEIKRAVARGRWMVRELQGIIKLKKYREMKKRYSSP 79
BLAST of mRNA_C-linearis_contig102.779.1 vs. uniprot
Match:
A0A6G0WG47_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WG47_9STRA)
HSP 1 Score: 64.3 bits (155), Expect = 2.340e-9
Identity = 34/86 (39.53%), Postives = 55/86 (63.95%), Query Frame = 2
Query: 173 MHPLVRNLCKRFILAARRHPSGEAWFKEKVRQALQRNALLTSYEDVKRAVARGRQVVRDSEEFSQFSRYRAMRRRYSDPDKK*MLR 430
MHPLVR++ KR ++ R +P G + +EK ++A + A LT+ E++KRAV RGR +V++ Q +YR M RY+ + + +LR
Sbjct: 1 MHPLVRDVYKRILVVGRDYPMGLDYVREKAKEAFYKEAHLTADEEIKRAVHRGRWMVKEMIGVIQLKKYRTMNARYTPAEMRMLLR 86
BLAST of mRNA_C-linearis_contig102.779.1 vs. uniprot
Match:
L1J1M7_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J1M7_GUITC)
HSP 1 Score: 61.6 bits (148), Expect = 1.120e-8
Identity = 37/78 (47.44%), Postives = 49/78 (62.82%), Query Frame = 2
Query: 173 MHPLVRNLCKRFILAARRHPSGEAWFKEKVRQALQRNALLTSYEDVKRAVARGRQVVRDSE-EFSQFSRYRAMRRRYS 403
MHPLVR+L KRFIL R +P G K+KV++A N L +++RAVARGR +R+ QF +YR M+ RYS
Sbjct: 1 MHPLVRDLYKRFILVGRDYPGGLQIIKKKVKEAFFTNRHLEDDIEIRRAVARGRWYIRNELCAIIQFKKYRVMKERYS 78
BLAST of mRNA_C-linearis_contig102.779.1 vs. uniprot
Match:
UPI000F5F551E (electron transfer flavoprotein regulatory factor 1 n=1 Tax=Larimichthys crocea TaxID=215358 RepID=UPI000F5F551E)
HSP 1 Score: 61.2 bits (147), Expect = 4.410e-8
Identity = 42/132 (31.82%), Postives = 68/132 (51.52%), Query Frame = 2
Query: 26 SSGGQQGG--RLKFDRKCAPSTSLREGQQPN*LSTLAPPERSRSYRGSAPEMHPLVRNLCKRFILAARRHPSGEAWFKEKVRQALQRNALLTSYEDVKRAVARGRQVVRDSEEFSQFSRYRAMRRRYSDPDK 415
S GGQ+ G L + R PST+ + + +S +A P R R L K + R +P G A+F+E+++ A +N +T E +K+ VARG V+++ E +YRAM++RY +P+K
Sbjct: 5 SEGGQRRGDVSLTYHRLNIPSTTRLVRVKGHLVSDMANPLRGEVIR------------LYKNLLYLGREYPQGSAYFRERLKSAFMKNKDVTDPEKIKKLVARGDFVIKELEALYFLRKYRAMKKRYYEPEK 124
BLAST of mRNA_C-linearis_contig102.779.1 vs. uniprot
Match:
A0A5A8CP96_CAFRO (Complex1_LYR_dom domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CP96_CAFRO)
HSP 1 Score: 59.7 bits (143), Expect = 4.930e-8
Identity = 33/76 (43.42%), Postives = 48/76 (63.16%), Query Frame = 2
Query: 173 MHPLVRNLCKRFILAARRHPSGEAWFKEKVRQALQRNALLTSYEDVKRAVARGRQVVRDSEEFSQFSRYRAMRRRY 400
MHPLVR+L KRF++A R +P G + + + A Q NA LT +KRAVA+GR VR+ +YR++++RY
Sbjct: 1 MHPLVRDLYKRFLVAGRDYPQGLDVVRRRAKLAFQENAHLTDEVAIKRAVAKGRYWVREIHATHALHKYRSIKKRY 76
BLAST of mRNA_C-linearis_contig102.779.1 vs. uniprot
Match:
H2SF26_TAKRU (Complex1_LYR_dom domain-containing protein n=12 Tax=Percomorphaceae TaxID=1489872 RepID=H2SF26_TAKRU)
HSP 1 Score: 59.7 bits (143), Expect = 6.040e-8
Identity = 29/77 (37.66%), Postives = 48/77 (62.34%), Query Frame = 2
Query: 185 VRNLCKRFILAARRHPSGEAWFKEKVRQALQRNALLTSYEDVKRAVARGRQVVRDSEEFSQFSRYRAMRRRYSDPDK 415
V L K + R +P G A+F+E+++ A +N +T E++K+ VARG V+++ E +YRAM++RY +PDK
Sbjct: 9 VIRLYKNLLYLGREYPQGSAYFRERLKSAFMKNKDVTDPEEIKKLVARGEFVIKEIEALYFLKKYRAMKKRYYEPDK 85
BLAST of mRNA_C-linearis_contig102.779.1 vs. uniprot
Match:
A0A7S2C6K2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C6K2_9STRA)
HSP 1 Score: 61.2 bits (147), Expect = 7.160e-8
Identity = 33/80 (41.25%), Postives = 50/80 (62.50%), Query Frame = 2
Query: 167 PEMHPLVRNLCKRFILAARRHPSGEAWFKEKVRQALQRNALLTSYEDVKRAVARGRQVVRDSEEFSQFSRYRAMRRRYSD 406
P MHPLVR+L KRFI R +P + ++K R+A+ +N LT ++ AV RGR +V++ Q +YRA+++RY D
Sbjct: 48 PTMHPLVRDLFKRFIYVGRDYPLPPPYVRDKAREAILKNKDLTDAREIIEAVKRGRWMVKEIIGVIQLKKYRALKKRYYD 127
BLAST of mRNA_C-linearis_contig102.779.1 vs. uniprot
Match:
A0A329S5G4_9STRA (Complex1_LYR_dom domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329S5G4_9STRA)
HSP 1 Score: 57.8 bits (138), Expect = 5.660e-7
Identity = 38/96 (39.58%), Postives = 54/96 (56.25%), Query Frame = 2
Query: 173 MHPLVRNLCKRFILAARRHPSGEAWFKEKVRQALQRNALLTSYEDVKRAVARGRQVVRDSEEFSQFSRYRAMRRRYSDPDKK*MLRF---KRVLGE 451
M P VR+L KRF+L R +P G +EKV+ A +N LT +K+A+ RGR +VR+ Q +YR + RY+ D + LR +RVL E
Sbjct: 1 MEPKVRDLYKRFLLVGRDYPLGLGHVREKVKVAFFQNRDLTDTVAIKKAIKRGRWMVREMVGVIQLKKYRTLNSRYTPEDLREKLRDIENRRVLAE 96
BLAST of mRNA_C-linearis_contig102.779.1 vs. uniprot
Match:
A0A067CLU1_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CLU1_SAPPC)
HSP 1 Score: 57.4 bits (137), Expect = 7.050e-7
Identity = 31/86 (36.05%), Postives = 53/86 (61.63%), Query Frame = 2
Query: 173 MHPLVRNLCKRFILAARRHPSGEAWFKEKVRQALQRNALLTSYEDVKRAVARGRQVVRDSEEFSQFSRYRAMRRRYSDPDKK*MLR 430
M P VR+L KRF++ + +P G + + KV++A + A L ++K+AV+RGR +V++ Q +YRAM +RY+ + +LR
Sbjct: 1 MQPRVRDLYKRFLVVGKDYPLGLEYVRPKVKEAFFKKAALADEAEIKKAVSRGRWMVKEMIGVIQLKKYRAMNQRYTPAEMHTLLR 86
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig102.779.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 1.96e-12 / Id = 46.43 Expect = 1.79e-11 / Id = 45.57 Expect = 2.34e-9 / Id = 39.53 Expect = 1.12e-8 / Id = 47.44 Expect = 4.41e-8 / Id = 31.82 Expect = 4.93e-8 / Id = 43.42 Expect = 6.04e-8 / Id = 37.66 Expect = 7.16e-8 / Id = 41.25 Expect = 5.66e-7 / Id = 39.58 Expect = 7.05e-7 / Id = 36.05 Sequence A0A7S1UA59_9STRA A0A8J5XPH7_DIALT A0A6G0WG47_9STRA L1J1M7_GUITC UPI000F5F551E A0A5A8CP96_CAFRO H2SF26_TAKRU A0A7S2C6K2_9STRA A0A329S5G4_9STRA A0A067CLU1_SAPPC Pages
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig102.779.1
>prot_C-linearis_contig102.779.1 ID=prot_C-linearis_contig102.779.1|Name=mRNA_C-linearis_contig102.779.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=83bp
MHPLVRNLCKRFILAARRHPSGEAWFKEKVRQALQRNALLTSYEDVKRAV back to top mRNA from alignment at C-linearis_contig102:226700..231416-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig102.779.1 ID=mRNA_C-linearis_contig102.779.1|Name=mRNA_C-linearis_contig102.779.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4717bp|location=Sequence derived from alignment at C-linearis_contig102:226700..231416- (Chordaria linearis ClinC8C monoicous)TACATACATGCCACCGCCCACGCTGTCCAGCGGGGGCCAACAAGGAGGGA
GATTGAAATTTGACAGGAAGTGCGCACCAAGCACTTCGCTCAGAGAAGGG
CAACAACCCAACTAACTCTCTACGCT GTGAGTTGATGCTTGTTCCTGTTA
TTAAAGACTACACACATGGTACAAGCTATTTCCAACTCTACATATCTACA
TGTATTCTAGACATGTGACGTTTTACAATCCCATCCCATACGATATGGGA
TTCCCATCCCATTGGTTCCCAACCAAGACCTTGTTTGTTTTATGCCACAC
ACACCTAATCGCGTTCTCCTTCCCTAAAAGTGTGCAGTTCTTTTCGTGCA
GTTGTACACTCCCCGTCATCGAGAGGTGTATCTTTCATTCCACGTAGAAA
TTGTAGACTATAATTAGGATGAAAACCTGGTTTCCGCTCATGCACAACAT
ACCCGCACACACATACACCCGCAGCCGGTTTCGACGCTGCTGTCTCTACA
CATACGCAGGCTACACACGGAGGCAATATTCCATCGGGAGAAGTTAAATT
CCGCATACAACCCTTTGCGCAATAAGGGAAGCATCTTGCAGTCTTCCTTC
AAGATCTTTTGACGGCGCGAATAAGCCTTTGAAAATCCCGTATGTTGCCC
TTCAGTCTAAGCAAGCTTTCAGGCGAAGATTCAACATTGCGGAGTTGCGG
AGTTGCGGAGTGGGGTGACAGATTTCGGCGTTGCTGGTAACCATGCGGCG
TCGCGCACCCCAAACACACACAGAGACGAAACTGTGAAGACCAAAAGAAG
CCGAACTACAACCACTCTCCATAGACATTTTCTAGGGTGGTGCGTACGTG
GCGCCCACGGGTGGAAAAAATAACTTTTTGAGGCCTCCCATCACGTGGGA
TGGGATGGCATTTGCGCCCACTTCTGATGGTATTACGATGGGATGGGATG
GGATGGTATTTGCGCGCCATTGCGGGTGACAATAGGAGCTAGAGGCATCC
ATCAATAGATCAAGAACTTGCCGGCAGCACAGCTTGGCGGGTGTTTCCGC
CTTTTCTTCCACAAAAGCCATCATCACTTTACTTTCCCCGCTAACAACAA
CAGCCGCCCCGTGCGTAGTTCGACTACTGTGGATGAACGACTAGCGACCG
ACAGGGAGTGCCGAATGCAAGAGTACAGCGCACATCTGATGGTAATACGA
TGGGATGGGATGGTGTCGTCGTACTTGTCGTGATGGGATGGGATGGTAAC
TGGTGGGACGGTGAGTGTGATGGGATGGGGGAGCTTTTGCCTTGGCGTGG
TGGCGAGAAGATGGTAACACAAAGAACTCTGGTACACAGAGGCGTTACCA
GTGCTACCCATCCTCCCGCTTGCATACACATACAAATAAACAACAGGAAA
TAAAACAAATATTCATACTTGTATAAATAAGTTGTCGCCCTGGAAATGGA
AAATACGAAAATACTACAACCGCGTAGTAGCATGAGACTATTCTACTTCC
GTCTGCCCACCTTGTCAAAAACATCAATAACGTGGTGGTCTTTAAAATAA
CGTTCTTTAGACCACAGCCAACTGCAGGCCAACTAACTCCAGCCGAAGTT
CTAAAATTTACTGCTATTACTGCTGTGTTCTTGAAGTTCTGGCCACAATA
CGCTTAAAAAAATCTCCGTATAAAACAAAAAAAGCAAAAACAAAAAACAG
ACAAAAAAAACAAAAACTGCAAGGTTGTGTTTAGTACAGTACATACTGGA
CGTACTCAAGTATTTTACTCGAGTATTTTACTATACTCTGCCAAAAGTAG
GTTTAGTATTGTACAGCTTTCGGGACTGTACTAAACCAAAAGTACGCTTA
AGTACAGCCCTCGATACTGTACTATACTCCGCGTTTAGTACCGGGTTTGG
ATCGATACTATACTCGGCTTAGTACAGTACTGCTGGATGTACTGTACTAT
ACTTTTGGGTTTAGTACAGCTCTCGATACTGTACTACCTCAATAGTACGC
TATAGTAAAACCCCCCGTACTGTACTATACTTAGGGTTTAGTACAACTCC
CGGTACTATACTAAAACCAACAGTACGTTTAGTACAGCTCCTGATACTAT
ACTTAACCAACAGTACGTTTAGTAGTACTATCAGTACTGTACTCTACTCG
TTCGGATAGTAATCCGAGTATCTACCCGGATCTGCCCGGATTCCGGCCAA
AGAGCGTATGGATGACGTCATTCTTGTGCAGAACGCGGCGTGTTTTGGTT
CTGTGTGTGTGTGCGTCCACACAGAGTACGCAGCTGCAGCAGCACTCTCG
GTGCTCTACTCAGGGTACTCGAGCAACAGTAATAGTACAGCCCTCGATAC
TGTACTATCCCAATAGTACGCGTTAGTACAGGCCTCGATACTGTACTATC
CCAATAGTACGCTTTAGTACAGCACTCGACACTGTACTATAACCAATAGT
AGGCTTAGTACAGCTCTTCGTACTGTACTATAATCAACAGTAGGTACCGG
GTTTGGATCGATACTATACGCGGCTTAGTACAGTACTGTTGGATGTACTG
TACTATACTTTTGGGTTTAGTACAGCTCTCGATACTGTACTAAACCAATA
GTACGCTTGAGTACACCTCTCCGTACTGTACTATACTGCATGTTTAGTAC
AACTCGTGATACTATACTACAGAGTACGTTTAGTACTACAATCAATACTC
TACTAAACGTACTGTACTGTACTAAACACAACCTTGAAAAACTGGTATTT
GAAACGTCGGACAGCAACCCTACTTGTTCAGGGTAACAGCAGTGTTATCT
TCCCTGGCTTGCTGGGCGGCAAACCGCCGCTTTTGCGATTGCATCGTGCT
TTGCCTTCATGGCCACTGTAGCTCTTGCTCTTCGCAAAGCCAGGGATGAG
GCGCCTGTGAAGCCTGAGCAACAGCATCTTCTCGATGTTACGGGGCAGGG
TACCGGCACGCAAGTCACTAATATAAGGACCTGCTTGAGGCCGGAAAAGT
TCCTCTCCGCTTGACAACTGGTGGTATCTACGCCTGCGTACAAACGTGCT
AGCAAACAAACCCACATGCGGCCAGCGGGCAGGCACTACAACGTTCCCTG
CCACGTGTTGCGTGTGTGTGTGTGTAGCGGGTCGAACCCCCTACCCCCCC
CTACCCCACACATTTTCTGCCCTTACACACCCCTCCCTCAGAGAGTACGT
TGCGCTGGATGGGTTGGGGGGGGGGGGTGCCGAGATGTACGGGGTGGTAT
TCGTGGTAGATCTCTGAAAAGAGGAACGGGTGAGACAAGACTGTTATCGA
TGGGATGGTGGTAACTTCAATAGCTGTGATGGTAAATTAGATGGGATGGG
AAGCGTTAAAAAACCACCACCTCTATACTGATGGTGTCTCCGACTGGCGT
GGTGGTGATGGGATGGGATCTTGTGATGGTACCAAAATTCCGACCCGATT
ACCATCCCATCAAGTGATGGTATACCATCCCATCACAACACCACGTATCA
CCCTGATTTGTTCCCCTCCCAGCCACGTGTGGTCGTGAGAGGTGTGCTAT
TATACTCACCGGAAGGTTTGGACTCAGTTGGCGTGTGCCACCTTCTCCAC
ATCGTCTAGGTGCGCTTGTGGCCAGCCAAGTCAACAAAGTTTTTTCAGAA
GCGAATGAAAGGACAATACGAGAGGGCACTGCTGACCCTGAACGTACCTT
AGGTCTCGCTAACTCCCCCACCAAGGTACCCAGAGCTCGAAAGAGATGCG
TGGCCAATGGTCCAAACCTCACAACAAGGGACGCATCGCATACTGAGCGC
CATCCGCCCCTCGCCTTTGCCCCCTTTTTAATCCAGAGCTCCGCCAGAGA
GAAGCAGGAGCTATCGCGGGAGCGCTCCCGAG ATGCATCCTTTGGTGAGG
AATCTCTGCAAGAGATTTATCCTGGCCGCCCGTCGGCACCCATCCGGAGA
GGCGTGGTTCAAAGAAAAAGTCCGACAAGCTTTGCAAAGAAATGCGCTGC
TTACTTCCTACGAAGACGTCAAGAGGGCCGTAGCTCGAGGGCGCCAAGTT
GTCAGGGATTCAGAAGAATTCTCTCAGTTTTCGCGGTATCGGGCTATGCG
TAGAAGATACTCCGATCCAGACAAAAAGTAG ATGCTCCGCTTCAAGCGAG
TTTTGGGGGAAGGGCTTGTGTATACCTATGTTGACGTTTGTGTACCGAAG
GTGATGTGGAGGTATGTATTTTTAGGCTGGCGAGCAATTATCCCCTACTT
CACAGATCTTGTTGCCAAACTGTGCTGCCTTAGTGCAGATGAGCTCAAGG
CAACCTGAGTACTCGTCGTCCTATCATGTTCGGCACGCGTGTTTGCTAAA
ATATAGTATTGTCATTTCGTGGTTGTGCGTGAGCAGCAGTACTGTGACGC
AAGGTCAACATCCTCCTGGCGCAGCAGCGCCTTTAGCTACAGATGAGGGC
GCAGCCGGAGTGTGCGCGGGCTAATACGTTGGCCTTCGGGTGTTTTTTTT
GCTACAGGCACAAGGAGAGACATGAGTTTGTGCAACTTGGAACAGTTCCC
GCCGAATAGTCTTGTGAAAAATGGGTACGCGTTGATACATACTTGAGAGT
ACTGAGGAACTGAGGGAGCATCTACAAGAGCTTTCCCCGGTGAGCAACGA
GACTTTGACGCGCAAACGTCTATTGCTGGACCACTCAAGAAGTCAGCGCG
ACTTGGTTGCAGATGAG back to top Coding sequence (CDS) from alignment at C-linearis_contig102:226700..231416-
>mRNA_C-linearis_contig102.779.1 ID=mRNA_C-linearis_contig102.779.1|Name=mRNA_C-linearis_contig102.779.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=498bp|location=Sequence derived from alignment at C-linearis_contig102:226700..231416- (Chordaria linearis ClinC8C monoicous) back to top