mRNA_C-linearis_contig102.778.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig102.778.1

>prot_C-linearis_contig102.778.1 ID=prot_C-linearis_contig102.778.1|Name=mRNA_C-linearis_contig102.778.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=514bp
MAQDPNTAGKWPGWAGLVVASAAVMCGLFIGGPPTLFSADKTSILTIFAR
EAFDWSSSTTPAPLSATAVLVKAVLAGKSSIAELGLENAVLSASASAEGK
TSIVDVRVGPVRDLISARILSKVKQLCDSSGTSSSCDPNEVDPEFGTTPL
HLAELWGSTELVEYLISIGASPEIFDTVGRQPRNMTFKAFSTNSKKAADG
RLPSPGSASTSAADLQDMRCEIPEVTVPLFPAATANKPAVSEQQRQQWQE
SSLVALAEVRRLVSEGEPVMVRNMVPWLQKQQDEQLRFPDASAFAEAWGH
RAVDVGGVPYAKIFDLFNERTTLNDYIDSTARAAAAVAADREDPAARLSP
NYVFQVDTEACIEGRELFERIVEAALPSSGDKPIVCPPPGGLRGLESVHY
YLGGQWSGAPFHIHSDALNLAVSGKKKWWVVTPRSAVWSRRHIREYAEES
KGGPAGGEDRPMECVQHGGDLVYVPGDWGHAAMNLEAGTFGYTLELVNLR
DTLASVLGMGCEQ*
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mRNA from alignment at C-linearis_contig102:222724..226667+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig102.778.1 ID=mRNA_C-linearis_contig102.778.1|Name=mRNA_C-linearis_contig102.778.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3944bp|location=Sequence derived from alignment at C-linearis_contig102:222724..226667+ (Chordaria linearis ClinC8C monoicous)
CCCGGAACACAGACACACCCGCCTCCAACGCGTGGTTTGTGAGACGAAAA ACGCGAGCCGCGACAACAAGAGGGGGGGGGTGTAGTGTTGAGATATGGCA CAAGATCCGAACACGGCTGGGAAATGGCCGGGTTGGGCGGGCCTCGTGGT AGCGTCGGCAGCCGTGATGTGCGGTCTGTTTATCGGCGGCCCGCCAACCC TCTTCAGCGCGGATAAAACCAGCATCCTCACGATATTCGCCAGGGAGGCT TTCGACTGGTCCAGCAGCACCACCCCGGCCCCTCTGAGCGCCACGGCAGT CCTGGTCAAGGCCGTTCTCGCGGGCAAGAGCAGCATTGCTGAGTTAGGCT TGGAGAACGCGGTGCTTTCCGCGTCCGCGTCCGCCGAAGGCAAGACGAGC ATCGTTGACGTTCGGGTAGGGCCTGTGAGAGACCTCATCTCCGCTCGTAT CCTGAGCAAGGTCAAGCAGTTGTGCGATTCGAGTGGTACCAGCAGCTCCT GTGACCCCAATGAGGTCGACCCTGAGTTCGGAACGACACCGCTTCATCTT GCCGAGCTCTGGGGCAGTACCGAGCTCGTGGAGTACCTGATATCCATCGG GGCCAGCCCGGAGATATTTGACACCGTTGGTCGCCAGCCTCGAAACATGA CGTTCAAGGCCTTCAGCACCAACAGCAAAAAGGCCGCGGACGGACGGCTT CCCTCGCCGGGCTCAGCGTCAACGTCGGCAGCTGATCTCCAAGACATGAG GTGCGAGATTCCCGAGGTGACCGTCCCGCTGTTCCCCGCCGCAACAGCCA ACAAACCCGCAGTGTCGGAGCAGCAGCGGCAGCAGTGGCAGGAATCCTCG CTCGTCGCCCTCGCCGAGGTACGCCGACTAGTCAGCGAGGGTGAGCCCGT CATGGTTCGCAATATGGTGCCGTGGCTACAGAAGCAGCAGGACGAGCAGC TCCGATTCCCAGACGCCTCCGCGTTTGCCGAGGCCTGGGGACACCGCGCG GTCGACGTGGGCGGCGTGCCGTACGCGAAGATCTTCGACCTCTTCAACGA GCGCACCACCCTCAACGACTACATAGATTCCACCGCCAGGGCTGCGGCTG CAGTAGCGGCGGACCGAGAGGACCCCGCAGCGCGCCTTTCGCCCAACTAC GTGTTTCAGGTGGACACCGAGGCCTGCATTGAAGGCCGCGAGCTTTTCGA AAGGATCGTCGAGGCTGCCCTGCCGTCCTCGGGCGACAAGCCAATTGTCT GCCCGCCGCCGGGCGGCCTCCGAGGCCTGGAGAGCGTCCACTACTACCTG GGCGGCCAGTGGAGCGGCGCGCCCTTCCACATCCACTCGGACGCGCTCAA CCTGGCCGTGTCGGGCAAGAAGAAGTGGTGGGTTGTGACCCCTCGGTCGG CCGTGTGGAGCAGGCGGCACATCCGTGAGTACGCCGAGGAGAGCAAGGGC GGGCCGGCTGGCGGCGAGGACCGGCCGATGGAGTGCGTGCAGCACGGCGG TGACCTGGTGTACGTGCCCGGAGACTGGGGACACGCAGCCATGAACCTGG AGGCCGGGACTTTTGGGTGAGTGGAAGAGGAAAGCGACGAAAACATGCGG AGTCCTGTAGCTGGGGAATGGCGTGAACCTGCGCGTCTTTTTTTCTGTTG GTACGGTATCGCGCGCTTGTTGTGCGTTTAGACTGATGGTAAAATTCCTG GCTTACGCGATGTTTGACGCTACCTGAATGGTAGTTCTTTGGAGAGCCAG TTCCAGGTGTCTACTGACCTTACTTTCGCCACCCCAACCGGCCGCCCTGT TGCGGCAGTTGAGAGTGAAGGATACCTTCAAGCAATGAACTCTTTAGATC GATGTAGGTAACAGCGTCTCATGCTTGTTGGTGTTCGTTCTTTCGTTTTG CTACAGGTACACTCTGGAGCTGGTGAACCTCAGGGACACTCTCGCGTCCG TCCTCGGAATGGGCTGTGAGCAATGATGGGGAATATCTCCGTGCGAATCT AGTTGGTTTTCCGTGTGCCCGCGTGCGTTAGCGCGAGGGGTGGTCGGCGT CAGCTGCCAATAGACGTCGTGAGGGACAGGCGGAAGCAGAGGTGTAGGCG TTTTTTGCCTTGGGACGTGGTGCTTCGTATTGGTCCTGGATGCGTTTCAA GAAGCTGTGTGTGTGTTTTTTCTGTGAGCAGCGTAGTCTTCCATTATAGA GGCAATGGCCATCTTGCCTAGCATGTCCCTGTGGTTTCGGAATTCTTATG TGTTCGTTATTGAATAGCGAAAAGGTAAATTGATTGTCTCCAGTGTGTCG TACGGTTTGTTGTGCAGAGGCAATGCCCATCTTGCCTACCGTAGACTACA GAAGAAAACACACCCCGGTGATAACATTTTCGTTTTAAAAAGAAATATCA CTGGGTGTGGTATCCTGTGGGGGTTGTGTTATCTCATGTAGCCCGGGTGA TAAAAGTGCAGCTCGCAGGAGCCGCAAAGGGGGTGTGATCGACCAGGGGT GTGACAGCACTTCCGCACCCCCAAAGAGGGTGTATTTTTTTCTTTTCTTT TTGCGTCTTCACATTTATTTCCAGAGTTCGCAGGGGCGCCTTGCCACGCG GGGTATCTTGCCAGAACATCTGAACCGTGGTCACACCGAAGGTTCCTCTT CCTGAGGCCCCCACTCCCACCCTCTGCCGTGCTTGCCTGGTAGTTTTTAA CGCGAGAAGAGGTCAGCCGTCTCTTTCCCTCGAGTGTACACACGAACTAA GCGCTTTCCACTGACAGAAAACGAAAGCGAGAGATGTATGGGGTGTGGTA ATGAGGGGGTGCGATAAATAAGAAAGGTGTAAAGCACTGCTGTCTGTAAC GATTGCTGCCGCACACTTGAAGGGTCATATTGGGGTGGCTGCCGTATTAG CGCCTGTTGCTGTACCAGCTGGTGCTGCTATCGATTTACCAGCAGCATTA GGCGCAGCAGGAGCCGCAGGTGTAGAAGAAGTTTGCTCGAGTGGAAATAA CAAGGTGATCGACCGCGCCTGCACTGCTGCGATCGAAGCAGGGGGGGTGC TATCTTATGTAACTCGGGTGATAATTCGCCTCCTCGTTTGAAATGCCCAA AAATATCACCGGGTTGTGGTTTTCTGTGGGGGGTGTAGTTTCTTATGTGG GTGTGTTTTCTTCGGCTGTAGTCTACGGTAGCTTTCCCCTTGTGGTTTTG GCGGAATGCTTATGTTTGATATTTGAATAGCGAAAACGGTAAATCAATGC CGCAGGAGCAAGTGCACTGCGAGGGTTGGTGTGCGGCACTCCAGTTTTGG AGTGGCGGGGTTTGGGGCTGTGGGTAGCACCCCTCTCGACCAGTTTTGGA GTGGCAGAGTTTGGGGCTGTGGGTAGCACCCCTCTCGCCTCTGATGGCAG AGAGCGGTGTTGTTCACACTCAACCCGATACCGTCTGTCCAGAACACTCT ATAGAGGGGGCTCCGGTTGTGAATGCGTCATGTTGTCGATGGTCTACTGC CTGGCAACGCTGTGGTGTGCTTGCTCCTACGCTTCAGTGTTGAATACTAG GCGTGTAGAGAGGATATACTTCGTATGTGTGCTCTGAAATGCTGTATCAT AAGTTTGTTAGATCCTTTGGTGTTTTGAAAACGTACCGGCAACTTTGTGT AGAGGAACGGGCGTACCCTGCTTTGAGGAGGGTTGACAATGGGTTTTTCC TGTCCACCTTGTAAGCGTTTCCCTTTTCGATGGGTTTTTGAGGCCCCGGG AGCATTTGCTAGGTGATGCGACGTGCAACGCTGGCATGTTGCGCGTCCGA ATGCTTTACGCGTTGTTGATGGTACACAGAACCCATTTTGTACACTGACT GGTTGCATTTTATATAAATTCAAGATTGGAGTATTTTCGTGCCAGCATTT TAGAACTCGGGCTCTGGCTCCAAATCTGACAACAAATACATCGC
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Coding sequence (CDS) from alignment at C-linearis_contig102:222724..226667+

>mRNA_C-linearis_contig102.778.1 ID=mRNA_C-linearis_contig102.778.1|Name=mRNA_C-linearis_contig102.778.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3084bp|location=Sequence derived from alignment at C-linearis_contig102:222724..226667+ (Chordaria linearis ClinC8C monoicous)
ATGGCACAAGATCCGAACACGGCTGGGAAATGGCCGGGTTGGGCGGGCCT
CGTGGTAGCGTCGGCAGCCGTGATGTGCGGTCTGTTTATCGGCGGCCCGC
CAACCCTCTTCAGCGCGGATAAAACCAGCATCCTCACGATATTCGCCAGG
GAGGCTTTCGACTGGTCCAGCAGCACCACCCCGGCCCCTCTGAGCGCCAC
GGCAGTCCTGGTCAAGGCCGTTCTCGCGGGCAAGAGCAGCATTGCTGAGT
TAGGCTTGGAGAACGCGGTGCTTTCCGCGTCCGCGTCCGCCGAAGGCAAG
ACGAGCATCGTTGACGTTCGGGTAGGGCCTGTGAGAGACCTCATCTCCGC
TCGTATCCTGAGCAAGGTCAAGCAGTTGTGCGATTCGAGTGGTACCAGCA
GCTCCTGTGACCCCAATGAGGTCGACCCTGAGTTCGGAACGACACCGCTT
CATCTTGCCGAGCTCTGGGGCAGTACCGAGCTCGTGGAGTACCTGATATC
CATCGGGGCCAGCCCGGAGATATTTGACACCGTTGGTCGCCAGCCTCGAA
ACATGACGTTCAAGGCCTTCAGCACCAACAGCAAAAAGGCCGCGGACGGA
CGGCTTCCCTCGCCGGGCTCAGCGTCAACGTCGGCAGCTGATCTCCAAGA
CATGAGGTGCGAGATTCCCGAGGTGACCGTCCCGCTGTTCCCCGCCGCAA
CAGCCAACAAACCCGCAGTGTCGGAGCAGCAGCGGCAGCAGTGGCAGGAA
TCCTCGCTCGTCGCCCTCGCCGAGGTACGCCGACTAGTCAGCGAGGGTGA
GCCCGTCATGGTTCGCAATATGGTGCCGTGGCTACAGAAGCAGCAGGACG
AGCAGCTCCGATTCCCAGACGCCTCCGCGTTTGCCGAGGCCTGGGGACAC
CGCGCGGTCGACGTGGGCGGCGTGCCGTACGCGAAGATCTTCGACCTCTT
CAACGAGCGCACCACCCTCAACGACTACATAGATTCCACCGCCAGGGCTG
CGGCTGCAGTAGCGGCGGACCGAGAGGACCCCGCAGCGCGCCTTTCGCCC
AACTACGTGTTTCAGGTGGACACCGAGGCCTGCATTGAAGGCCGCGAGCT
TTTCGAAAGGATCGTCGAGGCTGCCCTGCCGTCCTCGGGCGACAAGCCAA
TTGTCTGCCCGCCGCCGGGCGGCCTCCGAGGCCTGGAGAGCGTCCACTAC
TACCTGGGCGGCCAGTGGAGCGGCGCGCCCTTCCACATCCACTCGGACGC
GCTCAACCTGGCCGTGTCGGGCAAGAAGAAGTGGTGGGTTGTGACCCCTC
GGTCGGCCGTGTGGAGCAGGCGGCACATCCGTGAGTACGCCGAGGAGAGC
AAGGGCGGGCCGGCTGGCGGCGAGGACCGGCCGATGGAGTGCGTGCAGCA
CGGCGGTGACCTGGTGTACGTGCCCGGAGACTGGGGACACGCAGCCATGA
ACCTGGAGGCCGGGACTTTTGGATGGCACAAGATCCGAACACGGCTGGGA
AATGGCCGGGTTGGGCGGGCCTCGTGGTAGCGTCGGCAGCCGTGATGTGC
GGTCTGTTTATCGGCGGCCCGCCAACCCTCTTCAGCGCGGATAAAACCAG
CATCCTCACGATATTCGCCAGGGAGGCTTTCGACTGGTCCAGCAGCACCA
CCCCGGCCCCTCTGAGCGCCACGGCAGTCCTGGTCAAGGCCGTTCTCGCG
GGCAAGAGCAGCATTGCTGAGTTAGGCTTGGAGAACGCGGTGCTTTCCGC
GTCCGCGTCCGCCGAAGGCAAGACGAGCATCGTTGACGTTCGGGTAGGGC
CTGTGAGAGACCTCATCTCCGCTCGTATCCTGAGCAAGGTCAAGCAGTTG
TGCGATTCGAGTGGTACCAGCAGCTCCTGTGACCCCAATGAGGTCGACCC
TGAGTTCGGAACGACACCGCTTCATCTTGCCGAGCTCTGGGGCAGTACCG
AGCTCGTGGAGTACCTGATATCCATCGGGGCCAGCCCGGAGATATTTGAC
ACCGTTGGTCGCCAGCCTCGAAACATGACGTTCAAGGCCTTCAGCACCAA
CAGCAAAAAGGCCGCGGACGGACGGCTTCCCTCGCCGGGCTCAGCGTCAA
CGTCGGCAGCTGATCTCCAAGACATGAGGTGCGAGATTCCCGAGGTGACC
GTCCCGCTGTTCCCCGCCGCAACAGCCAACAAACCCGCAGTGTCGGAGCA
GCAGCGGCAGCAGTGGCAGGAATCCTCGCTCGTCGCCCTCGCCGAGGTAC
GCCGACTAGTCAGCGAGGGTGAGCCCGTCATGGTTCGCAATATGGTGCCG
TGGCTACAGAAGCAGCAGGACGAGCAGCTCCGATTCCCAGACGCCTCCGC
GTTTGCCGAGGCCTGGGGACACCGCGCGGTCGACGTGGGCGGCGTGCCGT
ACGCGAAGATCTTCGACCTCTTCAACGAGCGCACCACCCTCAACGACTAC
ATAGATTCCACCGCCAGGGCTGCGGCTGCAGTAGCGGCGGACCGAGAGGA
CCCCGCAGCGCGCCTTTCGCCCAACTACGTGTTTCAGGTGGACACCGAGG
CCTGCATTGAAGGCCGCGAGCTTTTCGAAAGGATCGTCGAGGCTGCCCTG
CCGTCCTCGGGCGACAAGCCAATTGTCTGCCCGCCGCCGGGCGGCCTCCG
AGGCCTGGAGAGCGTCCACTACTACCTGGGCGGCCAGTGGAGCGGCGCGC
CCTTCCACATCCACTCGGACGCGCTCAACCTGGCCGTGTCGGGCAAGAAG
AAGTGGTGGGTTGTGACCCCTCGGTCGGCCGTGTGGAGCAGGCGGCACAT
CCGTGAGTACGCCGAGGAGAGCAAGGGCGGGCCGGCTGGCGGCGAGGACC
GGCCGATGGAGTGCGTGCAGCACGGCGGTGACCTGGTGTACGTGCCCGGA
GACTGGGGACACGCAGCCATGAACCTGGAGGCCGGGACTTTTGGGTACAC
TCTGGAGCTGGTGAACCTCAGGGACACTCTCGCGTCCGTCCTCGGAATGG
GCTGTGAGCAATGAGTACACTCTGGAGCTGGTGAACCTCAGGGACACTCT
CGCGTCCGTCCTCGGAATGGGCTGTGAGCAATGA
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