Homology
BLAST of mRNA_C-linearis_contig101.732.1 vs. uniprot
Match:
D8LE10_ECTSI (Ubiquitin-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE10_ECTSI)
HSP 1 Score: 170 bits (430), Expect = 1.690e-50
Identity = 90/108 (83.33%), Postives = 101/108 (93.52%), Query Frame = 2
Query: 53 MRSSNFLLSAALLIGSAIDVLGGANPVSVKVTLRGKKYDVKDATSVEDVRKSVEEQAGLAKEQQSVLFKGSLLKSELDLEEAGIADGDTVNIVPSKKPKAAASAADKG 376
MR S+FL+SAALLIGSA+DVLGGA PVSVKVTLRGKKYDV+DATSVEDV+KSVEEQAGLAKEQQSVLFKGSLLK EL+LEEAG++DGDTVNIVPSKKPK + +A + G
Sbjct: 1 MRPSSFLISAALLIGSAVDVLGGAGPVSVKVTLRGKKYDVQDATSVEDVQKSVEEQAGLAKEQQSVLFKGSLLKPELELEEAGVSDGDTVNIVPSKKPKTSVAAVEAG 108
BLAST of mRNA_C-linearis_contig101.732.1 vs. uniprot
Match:
A0A836CH29_9STRA (Ubiquitin-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH29_9STRA)
HSP 1 Score: 95.9 bits (237), Expect = 1.200e-21
Identity = 54/101 (53.47%), Postives = 73/101 (72.28%), Query Frame = 2
Query: 65 NFLLSAALLIGSAIDVLGGANPVSVKVTLRGKKYDVKDATSVEDVRKSVEEQAGLAKEQQSVLFKGSLLKSELDLEEAGIADGDTVNIVPSKKPKAAASAA 367
+ LLSA ++ + + L A P++V VTLRGKKY V +SV D++ V+E+AGL+ EQQSVLFKG LL + DL G++DGDT+N+VPSKKPKA +AA
Sbjct: 4 SLLLSAGAVLAAVVPSLASA-PLNVVVTLRGKKYQV-SGSSVSDIQAEVQEKAGLSAEQQSVLFKGKLLAAGDDLSTVGVSDGDTINVVPSKKPKAERTAA 102
BLAST of mRNA_C-linearis_contig101.732.1 vs. uniprot
Match:
W7T2R4_9STRA (Ubiquitin-like domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T2R4_9STRA)
HSP 1 Score: 80.5 bits (197), Expect = 2.450e-15
Identity = 54/128 (42.19%), Postives = 78/128 (60.94%), Query Frame = 2
Query: 47 RTMRSSNFLLSAALLIGSAIDVLGGANPVSVKVTLRGKKYDVKDATSVEDVRKSVEEQAGLAKEQQSVLFKGSLLKSELDLEEAGIADGDTVNIVPSK---------KPKAA---ASAADKGFAVGAG 394
R + ++ FLL LL ++ G A PV+V VTLRGKKYD+ A SV+D++ +E ++GL QQ++LFKG L + L AG+ +GDT+NIVP+K +P+A+ ASA D+ A AG
Sbjct: 4 RKIVTATFLLVVTLLCCCLTNIFGTAAPVNVVVTLRGKKYDL-SAESVQDIQAQMEGKSGLKPGQQAILFKGKQLGASESLSAAGVVEGDTLNIVPTKGDVPRAPPPRPRASFSSASAEDEDLATPAG 130
BLAST of mRNA_C-linearis_contig101.732.1 vs. uniprot
Match:
A0A7S2N0G5_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N0G5_9STRA)
HSP 1 Score: 78.2 bits (191), Expect = 1.490e-14
Identity = 43/98 (43.88%), Postives = 63/98 (64.29%), Query Frame = 2
Query: 44 NRTMRSSNFLLSAALLIGSAIDVLGGANPVSVKVTLRGKKYDVKDATSVEDVRKSVEEQAGLAKEQQSVLFKGSLLKSELDLEEAGIADGDTVNIVPS 337
NR++ S+ LL G+ V+ G+ P +VKVTLRGK+Y + + ++V +++K VEEQAGL +Q VLF G LK LE+ G+ DG +NIVP+
Sbjct: 3 NRSLISALSSALLVLLYGAIDTVVEGSKPFNVKVTLRGKRYTIPNVSTVRELQKGVEEQAGLTPAKQGVLFGGKKLKPSDVLEDMGVEDGSLINIVPT 100
BLAST of mRNA_C-linearis_contig101.732.1 vs. uniprot
Match:
A0A7S2WG81_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WG81_9STRA)
HSP 1 Score: 76.6 bits (187), Expect = 4.300e-14
Identity = 38/75 (50.67%), Postives = 62/75 (82.67%), Query Frame = 2
Query: 131 VSVKVTLRGKKYDVKDATSVEDVRKSVEEQAGLAKEQQSVLFKGSLLKSELDLEEAGIADGDTVNIVPSKKPKAA 355
++V TLRGKK+DV A++V+++R+++E +AG+ +++QSVLFKG L ++ LE+AG+++GDT+N+VP K PKAA
Sbjct: 29 LNVVCTLRGKKFDVA-ASNVQEIREALEAKAGIEQDRQSVLFKGKKLDADQILEDAGVSEGDTINVVPLKAPKAA 102
BLAST of mRNA_C-linearis_contig101.732.1 vs. uniprot
Match:
B7G5I5_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G5I5_PHATC)
HSP 1 Score: 67.4 bits (163), Expect = 1.040e-10
Identity = 44/98 (44.90%), Postives = 61/98 (62.24%), Query Frame = 2
Query: 53 MRSSNFLLSAALLIGSAIDVLGGANPVSVKVTLRGKKYDVKDATSVEDVRKSVEEQAG-LAKEQQSVLFKGSLLKSELDLEEAGIADGDTVNIVPSKK 343
MR+ L +A L+G + P +V+VTLRGKKYDV D +V+D++ +EE +G LA +Q VLF G L+S L + G+ADG +NIVPS K
Sbjct: 1 MRTVFTLFLSATLLGRWLAAASAPVP-NVQVTLRGKKYDVTDVRTVQDLQDRIEEVSGILAPQQGRVLFDGKRLESTDVLADVGVADGAQLNIVPSSK 97
BLAST of mRNA_C-linearis_contig101.732.1 vs. uniprot
Match:
A0A7S2Y1L4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1L4_9STRA)
HSP 1 Score: 65.1 bits (157), Expect = 5.810e-10
Identity = 40/85 (47.06%), Postives = 56/85 (65.88%), Query Frame = 2
Query: 131 VSVKVTLRGKKYDVKDATSVEDVRKSVEEQAGLAKEQQSV-LFKGSLLKSELDLEEAGIADGDTVNIVPSKKPKAAASAADKGFA 382
+ V VTL+G++Y V AT+V D++ +E+QA L Q V LFKG +L E DLE G+ GD +N+VPS+KP+ AAS + G A
Sbjct: 23 LDVFVTLKGQRYSV-TATAVGDIKDELEKQAALDPSQDFVVLFKGKVLSPEDDLEAEGVKSGDIINMVPSRKPRPAASPSSVGAA 106
BLAST of mRNA_C-linearis_contig101.732.1 vs. uniprot
Match:
A0A448YZF6_9STRA (Ubiquitin-like domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YZF6_9STRA)
HSP 1 Score: 57.0 bits (136), Expect = 6.930e-7
Identity = 35/86 (40.70%), Postives = 54/86 (62.79%), Query Frame = 2
Query: 110 VLGGAN-----PVS-VKVTLRGKKYDVKDATSVEDVRKSVEEQAGLAKEQQSVLFKGSLLKSELD--LEEAGIADGDTVNIVPSKK 343
+LGGA+ PVS V VTL+GKKY + D T++ ++++ +EE +G+ +Q + SE D L EAG+ +GD +N VP+KK
Sbjct: 18 LLGGASAAPPTPVSNVHVTLKGKKYQIDDVTTLAELQERLEEHSGIPPSKQGKILHNGKRLSESDDGLSEAGVQEGDQLNCVPAKK 103
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig101.732.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 8
0 1 Expect = 1.69e-50 / Id = 83.33 Expect = 1.20e-21 / Id = 53.47 Expect = 2.45e-15 / Id = 42.19 Expect = 1.49e-14 / Id = 43.88 Expect = 4.30e-14 / Id = 50.67 Expect = 1.04e-10 / Id = 44.90 Expect = 5.81e-10 / Id = 47.06 Expect = 6.93e-7 / Id = 40.70 Sequence D8LE10_ECTSI A0A836CH29_9STRA W7T2R4_9STRA A0A7S2N0G5_9STRA A0A7S2WG81_9STRA B7G5I5_PHATC A0A7S2Y1L4_9STRA A0A448YZF6_9STRA back to top
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig101.732.1
>prot_C-linearis_contig101.732.1 ID=prot_C-linearis_contig101.732.1|Name=mRNA_C-linearis_contig101.732.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=121bp
MRSSNFLLSAALLIGSAIDVLGGANPVSVKVTLRGKKYDVKDATSVEDVR back to top mRNA from alignment at C-linearis_contig101:207735..211038+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig101.732.1 ID=mRNA_C-linearis_contig101.732.1|Name=mRNA_C-linearis_contig101.732.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3304bp|location=Sequence derived from alignment at C-linearis_contig101:207735..211038+ (Chordaria linearis ClinC8C monoicous)GTGATTTACGAGGACAACAGCGTGGCCCTCTTCTTCGAAAGACAACAGAA
CC ATGCGATCTAGCAACTTTCTTCTCTCGGCGGCGCTCCTTATCGGTAGC
GCGATCGATGTGCTTGGG GTGAGTTCGAGTAAAAGCAGCAGTTGGTACAT
CCAGACCACATGCTCTGATGCTCTGGAGGTTCGTGAAGACGAGCTTTCAT
GTTGGACAACCTCTGTTCGTGTGGGCGTCCCTCCACGTGCATGGGCCATG
ACTCTGGTGGAGTTGTGTGGTGCTTGGGTCGGGAAATTGTTGCAAATGTA
CGGCTCCCCTTGTGGTTTTTTGCTTGCAGGGCGGGCGGCTGCAACATTTA
TGTGAGGTTGCCGTGTCCTCGGGACACGTGTCCTGACCGCATCACACGCG
GCCGACACACGGACGGTGGTTTTCTTAGCGACGAGTATCAAGTGACACGG
GATGGGCTCACACTTTCAGCAGTCATTGTTCTTGGTGTTCAAGAAGGATA
GATGCGTCAGGCCCAATCATATACCCGCCAACCCGGCTGGCTCACCCCAT
CAGTGCGGGACTCTCTCGGCCTTCCACGTACGCAGGGCTGTATGTTGCAC
TCAGCCTCTACTACTATAAATAGACCTCTGCTATAAATCTGCAGCGGTCG
CTTTAGGTGGGATATTCTCGACGGGGGGGTACCTTGCGCAGCGGACACTA
GGTCGGAAAAAACACTGTTGTCGAGCCTCGCTGCTGTGCATGTGCGGAGC
GTATCCTTGTTCGACTTTCTTACAGCTACCCCGCCCCGTAGTTGGGTTGA
ACCTGCCGCACGTGTATCAGTAGTTGAGGCTGGTTGTGCCGGGTCCAAGC
GTACGGTGCCCTCCGTCTCACGTGACACGGGGAACCAAAGGGAGAGATAG
GAAAGTATTCAATGGAGAGGTCAATATTCTGCAGCATGTGCTCCAAGTTC
CAAGCTGGGCCCTTTCTCGTGGAACGATGTTCGGTTTGAAGGCCAGTTAT
TCTCGCTCTTGTCTGTGGATACACTCAGAAGAGGGTTTTCGATTTTCGTC
TTTCTTGGTCAAGTGATGGGCGCTGCGGTGCCGTGTTCGTCGCGGAAAGA
AGAAACCTGTTAACCTCTTGTACTGGCTTAGAGTGGAGCCCAAATAATGG
ACAAGTTCGGTGCTTCAAACGCGAGAATGGATCATTAATGCTTCGGTAGC
CCACAACAAGCAAGAATGTCGGGCGCGCAGAAAAGTCACCCTACCTAATT
CGTCCGGCAGCTACACGCGAGCGAGGACGCCGGACCACACAGACGGCAAG
AACCGATCTCATAGATGGCGATTTGGGGCATATTTTGGACCCCTCCTCGG
CATGTGAGCGCCAAATGGGAGCTGCCAACGAACGCAGCTTAATCCGCGTA
GAAGCGGGAGTAGGCAATGAAGGGTCAACGAACGATCGTGGACCCACCAC
GCTAACGCTGTCGTCACATTTCACTACTGCTGCTGCTATTGATACAGAAT
TTTCACCTAGCACAGATGGACGTGCACAGTCCAAGGGCTAGTCCTGTAAC
GACAAGCCACGTTAAACATTAATTATCACACCTTTGATAACCCCCCGCAA
CACCTGACCTATTGGTACACCCCAGTTGTGCATGTGACGATCCAGCGCAA
GATGCAACATTTCAAAGGTAATGTGTGTACAATACTGAGGTTCGAACATC
TCGCGTTCTCGTCCTGCCTTTCGCTTGCAGGGCGCCAATCCCGTGAGCGT
GAAGGTGACGCTGCGCGGCAAGAAGTACGACGTGAAGGACGCCACGAGCG
TCGAGGACGTCCGGAAGTCTGTCGAGGAGCAGGCTGGCCTTGCCAAGGAG
CAGCAG GTATTTTTTTGGTATGCACAACGTGCGCCCGTTGAATTCGATGC
TATATGGGTTGACATCCTACGTACATCATTTCTACAAGGCTCGTGTGTGG
ATGTCTTTTTGTTGCCTCCTCGAATAAGTGGGAACCGATACAATACCTAA
ATATATGGTAGCGACACCAAGCCTGACCGTACAGATTCTACAGCCGTGGC
AGGCACCGCGTAGGCGCCTTGCCATAAATTGCTTTATCCTATCTTGCGCC
TCGCGATTGGCAATGATCTCGCAGAATGAATCTTTAGCAGTATCGAGCTT
CGCGAGCGAGATGCTCTGTTCCAGTAATCGCAACGGTTGAGTTTTCTGAG
TTCGAGCGACGGTCTGTCGTTTCTGGTGGTAAACATGACATTGCATCCGT
TTCTCCGCCGTGCTTTGACAGGGGAGAGACGTTTGAACAATCCCCTGCAA
ACTGGGGTTCGATCTTTTTCGTCTCCTACGTGGATGGAAACAAAGAAAAT
GGGTTTCCCCTGATACGGAAACCTGGGGAAACTTGAGGGTCTGTTATTAA
CCGCGTCAGCACAAAGAAAGATCTCCCAACATTATACTTTTATGTGTTCG
GGAGGTTTTCTGCTCCTCCTCTCACCTCTATTTCTGTTGTCGTGTGCCCT
TCCCCCTGCGCCGCCGCGGGTGTGTTGCTCGCATTTCGGTGGCTTGCGTG
TTGGTTCGTTGGATCAGTCCGTTTTGTTCAAGGGTAGCCTCCTCAAGTCG
GAGTTGGATCTGGAAGAGGCGGGCATCGCAGACGGAGACACGGTGAACAT
CGTCCCGAGCAAGAAGCCCAAGGCGGCTGCGTCGGCG GTAAGCTGGCTCG
CTCTCACACCTGGCCTGACCCGACTTTGGTAAAACTCTTGCCTGCGATTT
TCTCCTTTCTCCTGTTGTGTAGTTCCGTTCTGTTCGTTCGTTGTAACTTA
ACTTCATCGATGGCCTGGCAGGCAATCCACCGGACGCACCGCGAGGGCCT
GGGCGGGGTATGTTGCATGTTGGTTTGGCGAGTTCACGTACGAAAAAGAC
AGTTCCTTCCGCAGATTCAGATCGACGCGGTTACTCGATTTTGCTAGAAG
CCCCCCCCCCCCAGCTTCCCCAGCTGGATTGGGGTGTCGTCGGTTCGGTC
AAAACGAAAAATTTCACAAGAGGGCGTGGTGGTGATGATATTTACATCGT
GCAGTCATTCAGCTGCGCCATCGGCGCTGTACAGCAGTACAGTACCGAGG
AGGCGTTTCGCTCAGCCGGGGCTACACCAGTAATTACACCTTTGTTTCCA
AGGGTGTTGGGTGTTGCTTGCACGTGGTTGGCTGTTCTGATTCGCGATCT
GTTGCTTCTTTCGCGTTCCGGCCGGCGGTGCGGTGTTCGGTGGTGCTCCA
CAGGCCGACAAGGGGTTTGCCGTTGGCGCGGGCGGGGACACGGAGGAGGT
GGGG back to top Coding sequence (CDS) from alignment at C-linearis_contig101:207735..211038+
>mRNA_C-linearis_contig101.732.1 ID=mRNA_C-linearis_contig101.732.1|Name=mRNA_C-linearis_contig101.732.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=726bp|location=Sequence derived from alignment at C-linearis_contig101:207735..211038+ (Chordaria linearis ClinC8C monoicous) back to top