Homology
BLAST of mRNA_C-linearis_contig101.709.1 vs. uniprot
Match:
D7FIE9_ECTSI (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIE9_ECTSI)
HSP 1 Score: 297 bits (760), Expect = 8.110e-96
Identity = 142/194 (73.20%), Postives = 158/194 (81.44%), Query Frame = 1
Query: 154 GRVSASGHDVTRLAQPTSQLAKDRKLSIKQRYVVGGGTEPPFSGRFTNGVKYNTKRRGTFNCIVCDLPAYASSSKFKSGTGWPSFYEPIDPDHVWETTDVSHGMVRKEVKCVRCHAHQGHVFNDGPQPTGKRYCVNAASLTFKAGTGEDQGPSHGLTAGLVRSISRRLRRKKKV---------EEPPATAPSSA 708
G VSASG+DVTR + T+QLA++R LSIKQRYVV GGTEPPFSGRF+NGV+Y+TKRRGTFNC VCDLPAY+SSSKF SGTGWPSFYE IDPDHVWETTD+S GMVRKEVKC RCHAHQGHVFNDGP+PTGKRYCVNAASLTFKA GE Q PSHG+ AG V +SR LR + K EE P+ P+ A
Sbjct: 17 GAVSASGYDVTRRKKGTAQLARERALSIKQRYVVSGGTEPPFSGRFSNGVRYSTKRRGTFNCAVCDLPAYSSSSKFNSGTGWPSFYETIDPDHVWETTDLSAGMVRKEVKCARCHAHQGHVFNDGPRPTGKRYCVNAASLTFKAAHGEGQVPSHGIAAGFVDMLSRHLRIRTKNKGGKEGAEGEEEPSARPTVA 210
BLAST of mRNA_C-linearis_contig101.709.1 vs. uniprot
Match:
A0A6H5JXE9_9PHAE (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXE9_9PHAE)
HSP 1 Score: 283 bits (723), Expect = 3.030e-90
Identity = 130/173 (75.14%), Postives = 149/173 (86.13%), Query Frame = 1
Query: 154 GRVSASGHDVTRLAQPTSQLAKDRKLSIKQRYVVGGGTEPPFSGRFTNGVKYNTKRRGTFNCIVCDLPAYASSSKFKSGTGWPSFYEPIDPDHVWETTDVSHGMVRKEVKCVRCHAHQGHVFNDGPQPTGKRYCVNAASLTFKAGTGEDQGPSHGLTAGLVRSISRRLRRKKK 672
G VSASG+DVTR + T+QLA++R LS+KQRYVV GGTEPPFSGRF+NGV+Y+TKRRGTF+C VCDLPAY+SSSKF SGTGWPSFYE +DPDHVWETTD+S GMVRKEVKC RCHAHQGHVFNDGP+PTGKRYCVNAASLTFKA +D+ PS G+ G V +SR LR + K
Sbjct: 16 GTVSASGYDVTRRKKSTAQLARERSLSVKQRYVVSGGTEPPFSGRFSNGVRYSTKRRGTFDCAVCDLPAYSSSSKFNSGTGWPSFYETVDPDHVWETTDLSAGMVRKEVKCARCHAHQGHVFNDGPRPTGKRYCVNAASLTFKAAHAQDRVPSGGI--GFVDMLSRHLRMRTK 186
BLAST of mRNA_C-linearis_contig101.709.1 vs. uniprot
Match:
Q0VPB9_ALCBS (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Alcanivorax borkumensis (strain ATCC 700651 / DSM 11573 / NCIMB 13689 / SK2) TaxID=393595 RepID=Q0VPB9_ALCBS)
HSP 1 Score: 169 bits (428), Expect = 3.140e-47
Identity = 77/143 (53.85%), Postives = 107/143 (74.83%), Query Frame = 1
Query: 160 VSASGHDVTRLAQPTSQLAKDRKLSIKQRYVV-GGGTEPPFSGRFTNGVKYNTKRRGTFNCIVCDLPAYASSSKFKSGTGWPSFYEPIDPDHVWETTDVSHGMVRKEVKCVRCHAHQGHVFNDGPQPTGKRYCVNAASLTFKA 585
+SASG D+T L++ Q A+ + L+ ++R+++ GTEPPF G + K GT++C +CDLP +AS +KF+SGTGWPSFY+P DP+H+ E +D SHGM+R E++C RC +HQGHVF DGP PTG+RYC+N+ASLTFKA
Sbjct: 5 LSASGFDLTPLSEEEKQ-ARAQTLTEEERHILLNQGTEPPFCGGLLDN-----KDAGTYHCKLCDLPLFASDAKFESGTGWPSFYQPYDPEHIRELSDRSHGMLRVEIRCARCDSHQGHVFPDGPPPTGQRYCLNSASLTFKA 141
BLAST of mRNA_C-linearis_contig101.709.1 vs. uniprot
Match:
B4X305_9GAMM (Peptide methionine sulfoxide reductase MsrB n=5 Tax=unclassified Alcanivorax TaxID=2638842 RepID=B4X305_9GAMM)
HSP 1 Score: 168 bits (426), Expect = 6.590e-47
Identity = 79/143 (55.24%), Postives = 102/143 (71.33%), Query Frame = 1
Query: 160 VSASGHDVTRLAQPTSQLAKDRKLSIKQRYVV-GGGTEPPFSGRFTNGVKYNTKRRGTFNCIVCDLPAYASSSKFKSGTGWPSFYEPIDPDHVWETTDVSHGMVRKEVKCVRCHAHQGHVFNDGPQPTGKRYCVNAASLTFKA 585
+SASG D+T L++ Q A+ R LS ++R ++ GTEPPF G + K GT++C +CDLP + SS+KF+SGTGWPSFYEP DP H+ E D SHGMVR E++C RC HQGHVF DGP PTG+RYC+N+AS+ FKA
Sbjct: 5 LSASGFDLTPLSEEEKQ-ARARSLSEEERRILLNQGTEPPFCGGLLDN-----KDDGTYHCKLCDLPLFTSSAKFESGTGWPSFYEPFDPQHIRELHDSSHGMVRVEIRCARCDGHQGHVFPDGPPPTGQRYCLNSASMVFKA 141
BLAST of mRNA_C-linearis_contig101.709.1 vs. uniprot
Match:
A0A2E9TLR4_9GAMM (Peptide methionine sulfoxide reductase MsrB n=6 Tax=Alcanivorax TaxID=59753 RepID=A0A2E9TLR4_9GAMM)
HSP 1 Score: 166 bits (420), Expect = 4.850e-46
Identity = 72/141 (51.06%), Postives = 97/141 (68.79%), Query Frame = 1
Query: 163 SASGHDVTRLAQPTSQLAKDRKLSIKQRYVVGGGTEPPFSGRFTNGVKYNTKRRGTFNCIVCDLPAYASSSKFKSGTGWPSFYEPIDPDHVWETTDVSHGMVRKEVKCVRCHAHQGHVFNDGPQPTGKRYCVNAASLTFKA 585
SASGHD+T L+ Q + + ++R ++ GTEPPF G + K G ++C +C+LP +A+S+KF+SGTGWPSFY+P DP+H+ E D SHGMVR E++C RC H GHVF DGP PTG RYC+N+AS+ FKA
Sbjct: 6 SASGHDLTPLSDTEKQQRAESLTAEERRILLNQGTEPPFCGGLLDN-----KENGVYHCKLCELPLFAASAKFESGTGWPSFYQPFDPEHIRELRDTSHGMVRVEIRCARCDGHLGHVFPDGPPPTGLRYCLNSASMVFKA 141
BLAST of mRNA_C-linearis_contig101.709.1 vs. uniprot
Match:
A0A7G2S6Q2_9GAMM (Peptide methionine sulfoxide reductase MsrB n=1 Tax=Alcanivorax sp. TaxID=1872427 RepID=A0A7G2S6Q2_9GAMM)
HSP 1 Score: 163 bits (412), Expect = 7.470e-45
Identity = 70/143 (48.95%), Postives = 96/143 (67.13%), Query Frame = 1
Query: 163 SASGHDVTRLAQPTSQLAKDRKLSIKQRYVVGGGTEPPFSGRFTNGVKYNTKRRGTFNCIVCDLPAYASSSKFKSGTGWPSFYEPIDPDHVWETTDVSHGMVRKEVKCVRCHAHQGHVFNDGPQPTGKRYCVNAASLTFKAGT 591
SASGHD+T L+ Q + ++R ++ GTEPPF G + + G ++C +CDLP +++++KF+SGTGWPSFY+P DP+H+ E D SHGM R E++C RC H GHVF DGP PTG RYC+N+AS+ FKA T
Sbjct: 6 SASGHDLTPLSDAEKQQRAEHLTDEEKRILLNQGTEPPFCGGLLDN-----REDGAYHCKLCDLPLFSANAKFESGTGWPSFYQPFDPEHIRELHDTSHGMTRVEIRCARCDGHLGHVFPDGPPPTGLRYCLNSASMVFKAST 143
BLAST of mRNA_C-linearis_contig101.709.1 vs. uniprot
Match:
UPI001D1954BC (peptide-methionine (R)-S-oxide reductase MsrB n=3 Tax=Alcanivorax TaxID=59753 RepID=UPI001D1954BC)
HSP 1 Score: 162 bits (410), Expect = 1.380e-44
Identity = 74/143 (51.75%), Postives = 93/143 (65.03%), Query Frame = 1
Query: 160 VSASGHDVTRLAQPTSQLAKDRKLSIKQRYVVGGGTEPPFSGRFTNGVKYNTKRRGTFNCIVCDLPAYASSSKFKSGTGWPSFYEPIDPDHVWETTDVSHGMVRKEVKCVRCHAHQGHVFNDGPQPTGKRYCVNAASLTFKAG 588
SASGHD+T L Q + ++R ++ GTEPPF G + K GT+ C +C LP + S KF+SGTGWPSFY+P+DP+HV E D SHGMVR E++C RC H GHVF DGP PTG RYC+N+ASL F+AG
Sbjct: 3 TSASGHDLTPLTDAEKQQRAAGLTAEERRILLNQGTEPPFCGGLLDN-----KESGTYLCKLCHLPLFRSDEKFESGTGWPSFYQPVDPEHVKELRDDSHGMVRTEIRCARCDGHLGHVFPDGPPPTGLRYCLNSASLVFEAG 140
BLAST of mRNA_C-linearis_contig101.709.1 vs. uniprot
Match:
A0A2E5TEI8_9GAMM (Peptide methionine sulfoxide reductase MsrB n=7 Tax=Alcanivorax TaxID=59753 RepID=A0A2E5TEI8_9GAMM)
HSP 1 Score: 159 bits (402), Expect = 1.980e-43
Identity = 72/141 (51.06%), Postives = 90/141 (63.83%), Query Frame = 1
Query: 160 VSASGHDVTRLAQPTSQLAKDRKLSIKQRYVVGGGTEPPFSGRFTNGVKYNTKRRGTFNCIVCDLPAYASSSKFKSGTGWPSFYEPIDPDHVWETTDVSHGMVRKEVKCVRCHAHQGHVFNDGPQPTGKRYCVNAASLTFK 582
SASGHD+T L Q + ++R ++ GTEPPF G + K GT+ C +C LP + S KF+SGTGWPSF+ P DPDHV E D SHGMVR E++C RC H GHVF DGP PTG+RYC+N+ASL F+
Sbjct: 3 TSASGHDLTPLTDAEKQQRAADLTTEERRILLNQGTEPPFCGGLLDN-----KEAGTYACKLCHLPLFRSDDKFESGTGWPSFFRPADPDHVRELQDASHGMVRTEIRCARCDGHLGHVFPDGPPPTGQRYCLNSASLVFQ 138
BLAST of mRNA_C-linearis_contig101.709.1 vs. uniprot
Match:
UPI001FF4BA14 (peptide-methionine (R)-S-oxide reductase MsrB n=1 Tax=Alcanivorax sp. S6407 TaxID=2926424 RepID=UPI001FF4BA14)
HSP 1 Score: 159 bits (402), Expect = 2.040e-43
Identity = 71/142 (50.00%), Postives = 93/142 (65.49%), Query Frame = 1
Query: 160 VSASGHDVTRLAQPTSQLAKDRKLSIKQRYVVGGGTEPPFSGRFTNGVKYNTKRRGTFNCIVCDLPAYASSSKFKSGTGWPSFYEPIDPDHVWETTDVSHGMVRKEVKCVRCHAHQGHVFNDGPQPTGKRYCVNAASLTFKA 585
SASG+D+T L++ Q ++R ++ GTEPPF G + K G ++C +CDLP ++S SKF+SGTGWPSFY P D +H+ E D SHGMVR E++C RC H GHVF DGP PTG RYC+N+AS+ FKA
Sbjct: 5 TSASGYDLTPLSEADKQQKAANLTEEERRILLNQGTEPPFCGGLLDN-----KDSGVYHCKLCDLPLFSSDSKFESGTGWPSFYAPFDSEHIRELRDTSHGMVRVEIRCARCDGHLGHVFPDGPAPTGLRYCLNSASMVFKA 141
BLAST of mRNA_C-linearis_contig101.709.1 vs. uniprot
Match:
A0A095SP60_9GAMM (Peptide methionine sulfoxide reductase MsrB n=5 Tax=Alcanivoracaceae TaxID=224372 RepID=A0A095SP60_9GAMM)
HSP 1 Score: 158 bits (400), Expect = 3.760e-43
Identity = 71/142 (50.00%), Postives = 94/142 (66.20%), Query Frame = 1
Query: 160 VSASGHDVTRLAQPTSQLAKDRKLSIKQRYVVGGGTEPPFSGRFTNGVKYNTKRRGTFNCIVCDLPAYASSSKFKSGTGWPSFYEPIDPDHVWETTDVSHGMVRKEVKCVRCHAHQGHVFNDGPQPTGKRYCVNAASLTFKA 585
S+SG+D+T L+ Q ++R ++ GTEPPF G + K G ++C +CDLP + S+SKF+SGTGWPSFYEP D H+ E D SHGMVR E++C RC H GHVF DGP PTG+RYC+N+AS+TFK+
Sbjct: 3 TSSSGYDLTPLSDAEKQQNAANLSEEERRILLNQGTEPPFCGGLLDN-----KEDGIYHCKLCDLPLFNSTSKFESGTGWPSFYEPFDSAHIRELRDTSHGMVRVEIRCARCDGHLGHVFPDGPPPTGQRYCLNSASMTFKS 139
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig101.709.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 8.11e-96 / Id = 73.20 Expect = 3.03e-90 / Id = 75.14 Expect = 3.14e-47 / Id = 53.85 Expect = 6.59e-47 / Id = 55.24 Expect = 4.85e-46 / Id = 51.06 Expect = 7.47e-45 / Id = 48.95 Expect = 1.38e-44 / Id = 51.75 Expect = 1.98e-43 / Id = 51.06 Expect = 2.04e-43 / Id = 50.00 Expect = 3.76e-43 / Id = 50.00 Sequence D7FIE9_ECTSI A0A6H5JXE9_9PHAE Q0VPB9_ALCBS B4X305_9GAMM A0A2E9TLR4_9GAMM A0A7G2S6Q2_9GAMM UPI001D1954BC A0A2E5TEI8_9GAMM UPI001FF4BA14 A0A095SP60_9GAMM Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 296.6 Seed ortholog evalue 9.5e-78 Seed eggNOG ortholog 2880.D7FIE9 KEGG ko ko:K07305 Hectar predicted targeting category other localisation GOs GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0016491,GO:0016667,GO:0016671,GO:0019538,GO:0030091,GO:0033554,GO:0033743,GO:0034599,GO:0042221,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0071704,GO:0097237,GO:0098754,GO:1901564,GO:1990748 EggNOG free text desc. peptide-methionine (R)-S-oxide reductase activity EggNOG OGs COG0229@1,KOG0856@2759 EC 1.8.4.12 COG Functional cat. O Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko01000 Exons 4 Model size 1445 Cds size 648 Stop 1 Start 1
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622927359.7421298-UTR-C-linearis_contig101:30931..31662 1622927359.7421298-UTR-C-linearis_contig101:30931..31662 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig101 30932..31662 - 1690879651.5155478-UTR-C-linearis_contig101:30931..31662 1690879651.5155478-UTR-C-linearis_contig101:30931..31662 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig101 30932..31662 - 1622927359.802687-UTR-C-linearis_contig101:33593..33659 1622927359.802687-UTR-C-linearis_contig101:33593..33659 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig101 33594..33659 - 1690879651.5898268-UTR-C-linearis_contig101:33593..33659 1690879651.5898268-UTR-C-linearis_contig101:33593..33659 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig101 33594..33659 -
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622927359.758566-CDS-C-linearis_contig101:31662..31828 1622927359.758566-CDS-C-linearis_contig101:31662..31828 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 31663..31828 - 1690879651.533885-CDS-C-linearis_contig101:31662..31828 1690879651.533885-CDS-C-linearis_contig101:31662..31828 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 31663..31828 - 1622927359.7708845-CDS-C-linearis_contig101:32305..32439 1622927359.7708845-CDS-C-linearis_contig101:32305..32439 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 32306..32439 - 1690879651.5466483-CDS-C-linearis_contig101:32305..32439 1690879651.5466483-CDS-C-linearis_contig101:32305..32439 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 32306..32439 - 1622927359.7806318-CDS-C-linearis_contig101:32674..32869 1622927359.7806318-CDS-C-linearis_contig101:32674..32869 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 32675..32869 - 1690879651.5561967-CDS-C-linearis_contig101:32674..32869 1690879651.5561967-CDS-C-linearis_contig101:32674..32869 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 32675..32869 - 1622927359.789885-CDS-C-linearis_contig101:33440..33593 1622927359.789885-CDS-C-linearis_contig101:33440..33593 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 33441..33593 - 1690879651.572617-CDS-C-linearis_contig101:33440..33593 1690879651.572617-CDS-C-linearis_contig101:33440..33593 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig101 33441..33593 -
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig101.709.1
>prot_C-linearis_contig101.709.1 ID=prot_C-linearis_contig101.709.1|Name=mRNA_C-linearis_contig101.709.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=216bp
MSTNTRRHTRREPRESQRGRDRQQMATAEGRVSASGHDVTRLAQPTSQLA back to top mRNA from alignment at C-linearis_contig101:30932..33659-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig101.709.1 ID=mRNA_C-linearis_contig101.709.1|Name=mRNA_C-linearis_contig101.709.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2728bp|location=Sequence derived from alignment at C-linearis_contig101:30932..33659- (Chordaria linearis ClinC8C monoicous)AAGAGAGCCAGCCGCGAGACACACCCACCATCCACACCACCACACTACAA
GTGCTACTGCCTGAAG ATGTCAACGAACACGCGCAGACACACACGCCGAG
AGCCGAGAGAGAGCCAGAGAGGCAGAGACAGACAGCAGATGGCCACCGCG
GAGGGCCGGGTCTCAGCGTCCGGTCACGACGTCACTAGGCTCGCGCAACC
TACTTCGCAGCTCGCGAAG GTATGTGGATGACGCGAGGTGCTGGTGGGCT
GGAGCAGTGTCGTACTCAGGCAAATTGATTATGCCTTTTGCCGTCTGTAC
AGCAGTACGTGGACAGCGAGTTGACTCCGCGAGGTGTGGTCTACGTAGCA
CAGCAGCTGTTGAAGTTGACGAGGGCCAGCAGCGTCGAACATGTCTCACA
CAGCAGTAGCAGTAGCTTCCCTGCCAAATTGAATTGCTGTAGTGTGTCTT
GCTGAGGCGCAGCCGGTATGTGACCGTAGGCAGGGTGTGCCTACAGGTGG
TCCGCTCGACGTGAGCCAATCTGCGTCGGTGAGGCCGAGCACGGCGCAGC
CATTGTCGGCGATGCAACACTAGCCAGCTGAGCGTGGCAGGATGAAGCTG
TATCATAGCCATTCTTGCGTGTGTCGTGTGTACAACCACCCAGCGGAATT
CCTACATGTAGCTGGGCTCCCTCGTTGTTTGCCTGCTTGTCATCGTCACT
CGTCACCTATTTTCAATGTGCCGATTGTGGTGTACATACCTCCTTTTGTT
ATCTCCAAATCTGTGCTGTCTACGCTGGAATCCCATCCAGGACCGGAAGC
TGTCCATAAAACAACGCTACGTGGTCGGCGGGGGCACTGAACCTCCCTTC
TCAGGCCGTTTCACGAACGGAGTCAAGTACAACACCAAACGGCGGGGCAC
GTTCAACTGCATCGTGTGCGATCTCCCGGCCTACGCGTCCTCTTCCAAGT
TCAAGAGCGGCACGGGTTGGCCCAGCTTTTACGAG GTACGCGCGCGCACA
CACACAACTAACTCGCTGCAATTGGCGCCAGTCCTGAAGTCACAATCATC
GTCACATGAGTCACATCCTGCCGAGCGTATCGCAGGCGGCGAAAGAGCGC
GAGAGTGAGCGTCGACAAGCCGGAGCACTCTCAATCGAGACCGCTTCCCC
ACCGAGAAGTCAAACGAAGAACGCGCCTTTACATGGTGCATTTTGACGTT
TGTTTGATCTTTTCGCGCAGCCTATCGACCCCGACCACGTGTGGGAAACG
ACCGACGTATCGCATGGCATGGTGCGAAAGGAGGTGAAATGCGTACGGTG
CCATGCTCACCAGGGGCATGTGTTCAACGACGGCCCTCAACCGACAGGGA
AAAG GTGCGCGTGGCGGGTTCCTCTCTGATTACTACTACTGTAGCCGCAT
TGTTTTATTATAGTAAACGTTTCAGCTCTTTTGCGTCCGCTTTTTGATGT
GCGGTGGCGCCTCATGCCTGTCGGCAAAAAGCTCTCTGAACCCCTCATTT
GATGCCGTAGGCGTGGTTTGTTTGGCTCTTTGATGCGTGATGGTGCCTTC
AGCCTCCGCAGGAAGCTCTCTGAGCCTCTTGATTTGATGCTGTAGGTTGA
CTTTGCGTGAGACACGTTGCATGAACATGTATGATATGTAGACACAGCCT
CTGTGCGCGTCTTCGGATACAGGCAGTTCCGTGCCGCGAAGTATCACTCC
CATCTAGTGTCACCAAGTTCCAAAGAACCTGTCATTTGTATTGTTGAAGT
TCGAAGCACAGTAGTACTGCTGTAGCCTCACCTCACCATCTCGATTTTCC
ATTATGTTTCCCGCCGTGCTCTGACGAGCAGGTATTGCGTGAATGCAGCC
TCCCTGACGTTCAAAGCAGGAACAGGAGAGGACCAGGGCCCATCGCATGG
CCTGACGGCAGGGTTGGTACGTTCGATTTCCAGACGCCTACGCCGCAAGA
AGAAGGTCGAAGAGCCTCCTGCGACGGCCCCATCAAGTGCTGCGTGA CCC
GTGCGGACGTAGCCGCCCTTTTTGATTGTATTGGGGCGTGATCTGTGACG
CAATGCGTGGATGAGCGTTCGTCTTGAAGCTGTATATATACAGCAGTTGG
TCATGTTTTCGAAGAAGAACGAGGTCGACGAGCCTTCTGCTCTGGCCCGT
TCAACTGCCGCGCTGTTCGTGCGGACGTATGTAGCTGCCCTTTTTGTTGT
TGTGGAGCATGGGATTGATTGGATTTCGTGTTTGTCGGTCGGTGCTGCGC
TTCGCACGTAGGTGTATGTATTTCGTCTTGGCTTGACGACGTCGATGTGG
TACATTCCTAGTGTTGTGTTGTATATTTTGGTTTCGCCGGGCAAGTCGGT
CGTGAAGACTCGCTCTACTTGTAATAGGTACAGTGTAGCAGTCTTTTACT
TTGTTGCGTTTTCCCAGAAAATAGGGGAATTTGGTGTCAAAAAGCCACGT
GTGGCAGATTGTAACCTGGATGTCCAAACCTGGATTTATGGGTAGTGTGT
TGTTTCGAAGTGACCTCGTCGGTATCAAACACACACAGGGTCGCCCACGT
TAGTACCACGCGCATGCCTCCCAGAGTTTGCCGTGGGTGGCGCTGTGCAA
CCCAGTTTTCTCATGGCATGTGTGACGGTTGACTTTTGATTTAAGCCTTT
AGTGAGAAAACCTTGGCCATCGACGTCCCTCTCGTCACTGCTCGCGGCGA
GCAGGAGGGTGGTGAACGAAAAGTGAAC back to top Coding sequence (CDS) from alignment at C-linearis_contig101:30932..33659-
>mRNA_C-linearis_contig101.709.1 ID=mRNA_C-linearis_contig101.709.1|Name=mRNA_C-linearis_contig101.709.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1296bp|location=Sequence derived from alignment at C-linearis_contig101:30932..33659- (Chordaria linearis ClinC8C monoicous) back to top