mRNA_C-linearis_contig101.707.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_C-linearis_contig101.707.1
Unique Name	mRNA_C-linearis_contig101.707.1
Type	mRNA
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)

Homology

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BLAST of mRNA_C-linearis_contig101.707.1 vs. uniprot
Match: A0A6H5KVY6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVY6_9PHAE)

HSP 1 Score: 220 bits (561), Expect = 3.290e-55
Identity = 132/304 (43.42%), Postives = 172/304 (56.58%), Query Frame = 1

Query: 4366 HAFLRQLHGLPPEPDEKFISTPPLGPEAVRERFVHYAMVAGNDFAKFQNVGPIAAAKLALPRVQDRASGQPVVRFEEVVESLVAGVVRLSKEGDSPEARAAVEKKLRVAHAMFRHAVVWEPDTGLLQHRSGAQSTEDITNATGTLRFSSIACDIVWGTVSPTDGEEWNPPLGQAPTELQRPDGPVKRTGAPL--ESLDDRP------VMRRR---DENVHREHGFSKLPDNDVDFNSWKNDQLKEFLSVFRCLDNAGASNYNKSNLVQLAVDVVRMIKRCGMVNRLTAFRIPSPTLPA*RRKRS 5244
            H +LRQLHG+    DE    TP   P A R R V +AM+ GNDFAKF+NVGP+ AA+LA            ++ F+ VV  L + ++  SKE D+P A   VE +LR  H MF   VVW P +G LQH SGA ++EDIT  TGTL  S +A  +  G V P  G EW+PPLG A  + Q       R    +  E    RP        R R   + N +R HGFS+LP    D+  W   +L+EFL+VFRCLDNAG S +NK+ L Q+A DVVR+I+ CG+++   AFR P P L +   K +
Sbjct:  435 HGWLRQLHGIHTPVDEGLDYTPLPEPTA-RRRLVLFAMIVGNDFAKFKNVGPVTAARLAFVDAASGVWATSLLPFDAVVGDLASRLLVESKEEDTPAAWREVEIRLRACHTMFTQPVVWNPLSGELQHLSGAPTSEDITRHTGTLELSPLASGVARGDVCPLTGGEWDPPLGTAQAKGQAAGEDASRPKKKVTPEIASSRPPNASSRTSRARGPQETNNYRAHGFSRLPGETEDYTKWTVPKLREFLTVFRCLDNAGTSGFNKALLAQMAGDVVRLIRSCGVLDTNLAFRHPVPDLSSFEEKEA 737

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BLAST of mRNA_C-linearis_contig101.707.1 vs. uniprot
Match: D7FQM4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQM4_ECTSI)

HSP 1 Score: 207 bits (526), Expect = 2.040e-54
Identity = 133/302 (44.04%), Postives = 173/302 (57.28%), Query Frame = 1

Query: 4372 FLRQLHGLPPEPDEKFISTPPLGPEAVRERFVHYAMVAGNDFAKFQNVGPIAAAKLALPRVQDRASGQP-VVRFEEVVESLVAGVVRLSKEGDSPEARAAVEKKLRVAHAMFRHAVVWEPDTGLLQHRSGAQSTEDITNATGTLRFSSIACDIVWGTVSPTDGEEWNPPLGQA--PTELQRPDGPVKRTGAPLESLD--------DRPVMRRR--------DENVHREHGFSKLPDNDVDFNSWKNDQLKEFLSVFRCLDNAGASNYNKSNLVQLAVDVVRMIKRCGMVNRLTAFRIPSPTL 5220
            FLRQLHGLP        ++P L   A R R   +A +AGNDFA F+N+GP+ AAK+A   ++    G   VV FE +V +L   VV+ SKE ++P A    E+KLR +  MF +AVVW+P    L+H S A S+  IT  TGTL FSS+A  I  G VSPT G+ W PPL +     E +R     +R G+ +            D+   R +        D N +R+HGFS+LP  + DFN W   QL+EFLSVFRCLD+AG S Y K  L +LA  VV MIK+CG++N   AFR P P L
Sbjct:    8 FLRQLHGLPRRHTPNLRASP-LTEAAARRRLSLFATLAGNDFADFKNIGPVRAAKVAFELIEPDPRGTAAVVPFEALVGNLARIVVQDSKEEETPAALEEAEEKLRRSQNMFHNAVVWDPLKNTLRHFSCAASSLAITKDTGTLEFSSVASGIASGEVSPTTGQVWAPPLLETRIAQEFRRA---TRRAGSQMPPXXXXXXXXXXDQSTGRNKRSRKAVTHDTNNYRKHGFSRLPGAEEDFNKWTVAQLREFLSVFRCLDHAGHSAYLKGPLAELAGQVVAMIKKCGLLNSNQAFRHPVPDL 305

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BLAST of mRNA_C-linearis_contig101.707.1 vs. uniprot
Match: A0A6H5KFX7_9PHAE (Exonuclease 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFX7_9PHAE)

HSP 1 Score: 211 bits (537), Expect = 2.000e-52
Identity = 136/308 (44.16%), Postives = 173/308 (56.17%), Query Frame = 1

Query: 4366 HAFLRQLHGLPPEPDEKFISTPPLGPEAVRERFVHYAMVAGNDFAKFQNVGPIAAAKLALPRVQDRASGQP-VVRFEEVVESLVAGVVRLSKEGDSPEARAAVEKKLRVAHAMFRHAVVWEPDTGLLQHRSGAQSTEDITNATGTLRFSSIACDIVWGTVSPTDGEEWNPPLGQA--PTELQRPDGPVKRTGAP--------------------LESLDDRPVMRRRDENVHREHGFSKLPDNDVDFNSWKNDQLKEFLSVFRCLDNAGASNYNKSNLVQLAVDVVRMIKRCGMVNRLTAFRIPSPTL 5220
            +AFLRQLHGLP       +   PL   A R R   +A +AGNDFA F+N+GP+ AAK+A   ++    G   VV FE +V +L   VV+ SKE ++P A    E+KLR AH MF +AVVW+P    L+H SGA S+  IT  TGTL FSS+A  I  G VSPT G+ W PPL +     EL+R     +R G+                       +   R  +     N H+ HGFS+LP  + DFN W   QL+EFLSVFRCLD+AG S Y K  L +LA  VV MIK+CG++N   AFR P P L
Sbjct:  229 YAFLRQLHGLP-RGHTPNLRASPLTEAAARRRLSLFATLAGNDFADFKNIGPVRAAKVAFELIEPDPRGTAAVVSFEALVGNLARIVVQDSKEEETPAALEEAEEKLRRAHNMFHNAVVWDPLKNTLRHFSGAASSLAITKDTGTLEFSSVASGIASGEVSPTTGQVWAPPLLETRIAQELRRA---TRRPGSQPPXXXXXXXXXXXXXXXXXXXXNKRSRNAVTHDTNNYHK-HGFSRLPGAEEDFNKWTVAQLREFLSVFRCLDHAGHSAYLKGPLAELAGQVVAMIKKCGLLNSNQAFRHPVPDL 531

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BLAST of mRNA_C-linearis_contig101.707.1 vs. uniprot
Match: D7G0K2_ECTSI (Exonuclease 1 n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G0K2_ECTSI)

HSP 1 Score: 207 bits (528), Expect = 1.780e-51
Identity = 126/304 (41.45%), Postives = 170/304 (55.92%), Query Frame = 1

Query: 4366 HAFLRQLHGLPPEPDEKFISTPPLGPEAVRERFVHYAMVAGNDFAKFQNVGPIAAAKLALPRVQDRASGQPVVRFEEVVESLVAGVVRLSKEGDSPEARAAVEKKLRVAHAMFRHAVVWEPDTGLLQHRSGAQSTEDITNATGTLRFSSIACDIVWGTVSPTDGEEWNPPLGQAPTELQR--PDGPVKRTGAPLESLDDRP------VMRRR---DENVHREHGFSKLPDNDVDFNSWKNDQLKEFLSVFRCLDNAGASNYNKSNLVQLAVDVVRMIKRCGMVNRLTAFRIPSPTLPA*RRKRS 5244
            H +LRQLHG+    DE    TP   P A R R + +A++ GNDFAKF+NVGP+ AA+LA    +       ++ F+ VV  L + ++  S+E D+P  R   E +LR  H MF   VVW P +G LQH SGA + E+IT   GT   S +A  +      P  G EW+PPLG A  + Q    D   ++  A  E+   RP        R R   D N +REHGFS+LP    D+      +L+EFLSVFRCLDNAG S +NK+ L Q+A DVVR+I+ CG+++   AFR P P L +   K +
Sbjct:  190 HGWLRQLHGIHQPVDEGLDYTPLPEPTA-RRRLLLFAIIVGNDFAKFKNVGPVTAARLAFVDTESGVWAASLLPFDAVVGYLASRLLVESREEDTPAVRREFEIRLRACHTMFTQPVVWNPLSGELQHLSGAPTREEITRHAGTSELSPLASRVARRDACPLTGREWDPPLGTAQAKGQAVGEDAGRQKKRATPETASTRPPNASSRASRSRGPQDTNNYREHGFSRLPAETEDYTKLTVPKLREFLSVFRCLDNAGTSGFNKALLAQMAGDVVRLIRSCGVLDTNLAFRHPVPDLSSFEEKEA 492

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BLAST of mRNA_C-linearis_contig101.707.1 vs. uniprot
Match: D7FZU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZU5_ECTSI)

HSP 1 Score: 175 bits (443), Expect = 2.990e-42
Identity = 118/301 (39.20%), Postives = 156/301 (51.83%), Query Frame = 1

Query: 4375 LRQLHGLPPEPDEKFISTPPLGPEAVRERFVHYAMVAGNDFAKFQNVGPIAAAKLALPRVQDRASGQPVVRFEEVVESLVAGVVRLSKEGDSPEARAAVEKKLRVAHAMFRHAVVWEPDTGLLQHRSGAQSTEDITNATGTLRFSSIACDIVWGTVSPTDGEEWNPPLGQAPTELQRP--DGPVKRTGAPLESLDDRP------VMRRR---DENVHREHGFSKLPDNDVDFNSWKNDQLKEFLSVFRCLDNAGASNYNKSNLVQLAVDVVRMIKRCGMVNRLTAFRIPSPTLPA*RRKRS 5244
            LRQLHG+    DE F  TP   P A R R + +A++ G DFAKF+NVGP+ AA+LA    +  +          + E+   G         SP  R            + R  VVW P +G LQH SGA + E+IT  TGTL  S +A  +  G +    G EW+PPLG A  + Q    D   ++  A  E+   RP        R R   D N +REHGFS+LP    D+  W   +L+EFLSVFRCLDN G S  NK+ L Q+A DVVR+I+ CG+++   AFR P P L +   K +
Sbjct:  166 LRQLHGIHQPVDEGFDYTPLPEPTA-RRRLLLFAIIVGKDFAKFKNVGPVTAARLAFVDTESVSGRHLCYHSMRLWETWPQGCWW------SPGRRTR----------LLRGPVVWNPLSGELQHLSGASTREEITRHTGTLELSPLASRVARGDICLLTGREWDPPLGTAQGKGQAAGADAGRQKKKATPETASSRPSNASSRASRARGPQDTNNYREHGFSRLPGETEDYTKWTVPKLREFLSVFRCLDNTGTSGLNKALLAQMAGDVVRLIRSCGVLDTNLAFRHPFPDLSSFEEKEA 449

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BLAST of mRNA_C-linearis_contig101.707.1 vs. uniprot
Match: D7G6L7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6L7_ECTSI)

HSP 1 Score: 168 bits (425), Expect = 5.520e-42
Identity = 120/304 (39.47%), Postives = 156/304 (51.32%), Query Frame = 1

Query: 4372 FLRQLHGLPPEPDEKFISTPPLGPEAVRERFVHYAMVAGNDFAKFQNVGPIAAAKLALPRVQDRASGQP-VVRFEEVVESLVAGVVRLSKEGDSPEARAAVEKKLRVAHAMFRHAVVWEPDTGLLQHRSGAQSTEDITNATGTLRFSSIACDIVWGTVSPTDGEEWNPPLGQA--PTELQRPDGPVKRTGAP----------LESLDDRPVMRRR--------DENVHREHGFSKLPDNDVDFNSWKNDQLKEFLSVFRCLDNAGASNYNKSNLVQLAVDVVRMIKRCGMVNRLTAFRIPSPTL 5220
            FLRQLHGLP        ++P L   A R R   +A +AGNDFA F+N+GP+ AAK+A   ++    G   VV FE +V +L   VV+ SKE ++P A    E+KLR +H MF +AVVW P    L+H S A S+  IT  TGTL FS +A  I  G VSPT G+ W PPL +A    E +R     +R G+                D+   R +        D N + +HGFS+LP  + DFN W   QL+EFLSV                       VV MIK+CG++N   AFR P P L
Sbjct:    8 FLRQLHGLPRRHTPNLRASP-LTEAAARRRLSLFATLAGNDFADFKNIGPVRAAKVAFELIEPDPRGTAAVVPFEALVGNLARIVVQDSKEEETPAALEEAEEKLRRSHNMFHNAVVWGPLKNTLRHFSCAASSLAITKDTGTLEFSYVASGIASGEVSPTTGQVWAPPLLEARMAQEFRRA---TRRPGSQPPXXXXXXXXXXXXXDQSTGRNKRSRKAVTHDTNNYHKHGFSRLPGAEEDFNKWTVAQLREFLSV----------------------QVVAMIKKCGLLNSNQAFRHPVPDL 285

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BLAST of mRNA_C-linearis_contig101.707.1 vs. uniprot
Match: D7FZG7_ECTSI (Exonuclease I Exo1 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZG7_ECTSI)

HSP 1 Score: 166 bits (421), Expect = 5.920e-39
Identity = 102/238 (42.86%), Postives = 135/238 (56.72%), Query Frame = 1

Query: 4564 ASGQPVVRFEEVVESLVAGVVRLSKEGDSPEARAAVEKKLRVAHAMFRHAVVWEPDTGLLQHRSGAQSTEDITNATGTLRFSSIACDIVWGTVSPTDGEEWNPPLGQAPTELQR--PDGPVKRTGAPLESLDDRP------VMRRR---DENVHREHGFSKLPDNDVDFNSWKNDQLKEFLSVFRCLDNAGASNYNKSNLVQLAVDVVRMIKRCGMVNRLTAFRIPSPTLPA*RRKRS 5244
            AS QP   F+ VV  L + ++  S+E D+P AR   E +LR  H M    VVW+P +G LQH SGA + E+IT  TGTL  S +A  +  G V P  G EW+PPLG A  + Q    D   ++  A  E+   RP        R R   D N +REHGFS+LP    D+  W   +L+EFLSVFRCLD AG S + K+ L Q+A DVVR+I+ CG+++   AFR P P L +   K +
Sbjct:  190 ASLQP---FDAVVGDLASRLLVESREEDTPAARREFEIRLRACHTMVTQPVVWDPLSGELQHLSGAPTREEITRHTGTLELSPLASRVARGDVCPLTGREWDPPLGTAQAKGQAVGEDAGRQKKRATPETASTRPPNASSRASRARGPQDTNNYREHGFSRLPGETEDYTKWTVPKLREFLSVFRCLDTAGTSGFKKALLAQMAGDVVRLIRSCGVLDTNLAFRHPVPDLSSFEEKEA 424

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BLAST of mRNA_C-linearis_contig101.707.1 vs. uniprot
Match: D7G3Y3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Y3_ECTSI)

HSP 1 Score: 140 bits (352), Expect = 8.790e-33
Identity = 85/193 (44.04%), Postives = 103/193 (53.37%), Query Frame = 1

Query: 4699 MFRHAVVWEPDTGLLQHRSGAQSTEDITNATGTLRFSSIACDIVWGTVSPTDGEEWNPPL----------------GQAPTELQRPDGPVKRTGAPLESLDDRPVMRR---RDENVHREHGFSKLPDNDVDFNSWKNDQLKEFLSVFRCLDNAGASNYNKSNLVQLAVDVVRMIKRCGMVNRLTAFRIPSPTL 5220
            MF +AVVW+P    L+H SGA S+  ITN TGTL FSS+A  I  G VSPT G+ W PPL                G  P                  S       R+    D N + +HGFS+LP  + DFN W   QL+EFLSVFRCLD+AG S Y K  LV+LA  +V MIK+CG++N   AFR P P L
Sbjct:    1 MFHNAVVWDPLKNTLRHFSGAASSLAITNDTGTLEFSSVASGIASGEVSPTTGQVWAPPLLETRIAQEFRRATRRPGSQPPXXXXXXXXXXXXXXXXXSTSRNKRSRKAVTHDTNNYHKHGFSRLPGAEEDFNKWTVAQLREFLSVFRCLDHAGHSAYLKGPLVELAGQIVAMIKKCGLLNSNQAFRHPVPDL 193

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BLAST of mRNA_C-linearis_contig101.707.1 vs. uniprot
Match: D7G4G5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4G5_ECTSI)

HSP 1 Score: 138 bits (347), Expect = 5.460e-30
Identity = 108/302 (35.76%), Postives = 147/302 (48.68%), Query Frame = 1

Query: 4366 HAFLRQLHGLPPEPDEKFISTPPLGPEAVRERFVHYAMVAGNDFAKFQNVGPIAAAKLALPRVQDRASGQPVVRFEEVVESLVAGVVRLSKEGDSPEARA-AVEKKLRVAHAMFRHAVVWEPDTGLLQHRSGAQSTEDITNATGTLRFSSIACDIVWGTVSPTDGEEWNPPLGQAPTELQRPDGPVKRTG-------APLESLDDRP------VMRRR---DENVHREHGFSKLPDNDVDFNSWKNDQLKEFLSVFRCLDNAGASNYNKSNLVQLAVDVVRMIKRCGMVNRLTAFRIPSPTL 5220
            H +LRQLHG+    DE    TP   P   R R + +A++ GNDFAKF+NVGP+ AA+LA    +       ++ F+ VV  L + ++  S+E D+P AR   VE   R      R      PD G            D+    G +  + + C    G     D     P  G +  E     G   R G       A LE+   RP        R R   D N +REHGFS+LP    D+  W   +L+EF+SV+RCLDNAG S +NK+ L Q+A DVVR+I+ CG+++   AFR P P L
Sbjct:  163 HGWLRQLHGIHQPVDEGLDYTPLPEPTG-RRRLLLFAVIVGNDFAKFKNVGPVTAARLAFVDTESGVWAASLLPFDAVVGDLASRLLVESREEDTPAARPRGVEPAERRTPTFVRR-----PDQG-----GNHPPYRDV----GAIP-AGVPCGP--GRCLSADRARMGPTAGYSTNE-----GAGGRRGCWQAEERATLETASTRPPNASSRASRARGPQDTNNYREHGFSRLPGETEDYTKWTVPKLREFVSVYRCLDNAGTSGFNKALLAQMAGDVVRVIRSCGVLDTNLAFRHPVPDL 441

[Close]

BLAST of mRNA_C-linearis_contig101.707.1 vs. uniprot
Match: D7G2U9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2U9_ECTSI)

HSP 1 Score: 90.5 bits (223), Expect = 1.940e-17
Identity = 42/75 (56.00%), Postives = 58/75 (77.33%), Query Frame = 2

Query: 5252 PDLPPASVRVRDWEVLRDFLPEISKAVILRFLQEVNPTASLSSRVWYRGMQRVMDMGNLSRLWAVPPQHGVMWLG 5476
            P+LP    R+  +E  +  LPE+SK+VIL+F ++VNP +   SRVWYRGMQ+VMDMGNL+RLW VP ++G+M+LG
Sbjct:   33 PELPGPRSRISGFEHPQQHLPEMSKSVILQFPRQVNPISGEGSRVWYRGMQKVMDMGNLNRLWRVPAKNGLMYLG 107

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig101.707.1 vs. uniprot

BLAST of mRNA_C-linearis_contig101.707.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
A0A6H5KVY6_9PHAE	3.290e-55	43.42	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
D7FQM4_ECTSI	2.040e-54	44.04	Uncharacterized protein n=2 Tax=Ectocarpus silicul...	[more]
A0A6H5KFX7_9PHAE	2.000e-52	44.16	Exonuclease 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 ...	[more]
D7G0K2_ECTSI	1.780e-51	41.45	Exonuclease 1 n=3 Tax=Ectocarpus TaxID=2879 RepID=...	[more]
D7FZU5_ECTSI	2.990e-42	39.20	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7G6L7_ECTSI	5.520e-42	39.47	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7FZG7_ECTSI	5.920e-39	42.86	Exonuclease I Exo1 n=2 Tax=Ectocarpus siliculosus ...	[more]
D7G3Y3_ECTSI	8.790e-33	44.04	Uncharacterized protein n=2 Tax=Ectocarpus silicul...	[more]
D7G4G5_ECTSI	5.460e-30	35.76	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7G2U9_ECTSI	1.940e-17	56.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

Relationships

The following UTR feature(s) are a part of this mRNA:

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927359.5681472-CDS-C-linearis_contig101:19738..20494	1622927359.5681472-CDS-C-linearis_contig101:19738..20494	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig101 19739..20494 +
1690879651.407792-CDS-C-linearis_contig101:19738..20494	1690879651.407792-CDS-C-linearis_contig101:19738..20494	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig101 19739..20494 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig101.707.1	prot_C-linearis_contig101.707.1	Chordaria linearis ClinC8C monoicous	polypeptide	C-linearis_contig101 19739..20494 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at C-linearis_contig101:14597..22757+
coding sequence from alignment at C-linearis_contig101:14597..22757+

protein sequence of mRNA_C-linearis_contig101.707.1

>prot_C-linearis_contig101.707.1 ID=prot_C-linearis_contig101.707.1|Name=mRNA_C-linearis_contig101.707.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=252bp
MGIVKLSPKLKVLCGLQANLETDKNLELVIDGGFLLHKCASRGDAAEKLV
LNNDVNGIARQCAREIERFEKRGLAVWLVFDGCPPPAKGCTGDGRRETRE
GYERDARRLLGEAGAMAQVHKLCAQACSFGPRTVARIATLLRPMIKGRIM
TAPGEADPQIAVVEETIRARGADVMVYGNDSDLAVLGVRKLLHKIKERHG
VLTGWFYDLRLLIEPSTWVFTKDSPACLPSSAPRSTARAGREVHQHTSVG
P*

mRNA from alignment at C-linearis_contig101:14597..22757+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_C-linearis_contig101.707.1 ID=mRNA_C-linearis_contig101.707.1|Name=mRNA_C-linearis_contig101.707.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=8161bp|location=Sequence derived from alignment at C-linearis_contig101:14597..22757+ (Chordaria linearis ClinC8C monoicous)
CTGGGAACGCGTCAACAGGGTTTCAGCCTAGGGTCGTGAGGCGTGCTTCA
TCTCAGCTGCGGGCAAAGCAACACGCAACACGCAACACGCCTGCTTGCGC
AGGTGTACAATAGGAGCCTCGCCTCGCGTTACTCCCCACTTTCTCGACGC
CTCGTGTTGTCTGAATCGGCAAGACGAGCTTCACATCCCCTGCACCTCTT
CTTTTCGCCATCGTCGAGAGAAAGGCATGCCTGTCCTGCATCGTTACCCT
CACCGCTCGCTCCTGGAAGGGGCAGAGGCGGAGATATTCGAAGCTCTTGG
TATTCGGCGCCACCCCCGAGCAGTGGGCCGAGTGGCTTCGGGCGCCGCTG
GAAAATTTGACCTCGTCCAGAGGCTGCTCAAGGCCGGGGCCAACGGCGGT
GAGGGATGGAGAGGATAGGGTTCCTGCATTAGGGGCCTAAAATCTCAAAA
AGGTCTCTGGGGGGGGGCTGTTTTCCAGTCTAAAATCAAGTGGAAAGAGA
GCCCCCGTGAAGCTCAGAGCGCATTCGACCTCGTGAAATAGAAGATGCCG
TCAAGAGGGTTGCAGGACAAATTGGCGACCCTCAGTTGCAGAATCATTCC
TCCGAACTATCTATGGCATGACCCTGTCGTCGCACGTGAAGACGCTGCCC
ACTGGCGCCTTTGCCAGAGGGTAGGCTCTACCGCTTGAAACGTAAAAAAC
TCCGCAAAATAGCCTGCAAACCAAAAAAAAGCAGTTGCACAGGGTATTTT
GGGACAGCACTACAGCACTGCGGAGAGAGCGGCGTCGCGACATCCCCGCC
ACCACACACCACGCACCGGTGCGCACCAACACTAAACGCACACACTGGAC
AACAGAGGCACACACTACACCGATCCCTGCCCGTCATGGGGGAACCACAG
ATGCATCTGCTCGTCCCAGTTTTGTCGGCGAGATGGCCTGAGCGCGTCAA
TCCGGCTGCCACCGGAGCCAATAAAGAGAAAGGCGTGGTTGGATGCTATG
TCCAAGGCACACGTACAACCAGCAAGTGCCCTCCCCAAAGACCCCAGGTT
AAGCTTAGCGCACTTCACCGACGGCAGTCTTGAAGCCGACCTGGCGTGCG
CCTGCCGGATGGAAGCAAAGATGTAACTCCGCAAAATCGTTTGAAAAAAA
AAAAACAGCAGTTGGGCTGATGACTTTTGGTCAGCTCCCACACAACGCCT
TCTCCCCATCTTCCACACCACGTTCCGACATCACACTCGCCACCACTAGT
ATTAGCTGCAGCCATGAACGCCGGCACGGAAACAGCCCCGCCCACGCCAA
GCCCTCACCGTGGCTGTTACATCCTCGGTGGTTGCGGGCACGTCGACCTG
CTGGGAGGCCAGCACAAGTGCGCAGTGTGTGAGGTACTCCTGCACAACTT
GTGCTTTCAAGAGTTTACCGGCACGGACGACCCCCCCACCAACAAAATGT
CCTGTGGGGGTTCCAAGGTGCCAGGAGCGCATGACTGTGGGTGAGAAGAC
GGCCGCTATAGCGGAACACGCATCGCGCCAACAAGCGCAAGCTCAGCAGC
CGCGCGGATCTACGGCGACCTGCACGGCAGGGGAAGGTTGCGAGGTTTCG
CCACCTTCCTCGAAGGCTCTGTCGGCCAGGTGCACGCACGGCAACGCATG
TCACTTCGACTGCTTGGCGGCGCCTTTGCACGAGCTGCCTCACCACGCCT
CAAGGTACGAGTCAGGGTTGTCTTTGCGGTAAAATCTGATACGTCTTGCC
CCGTCGTGCTGCTGTGGGCAGCATGAGATTCGGTGATGGCCAACGTGCAG
CGGGGATCGATTGGTTCCTAGGGTTAGGTTAGCGTTATCATTATGTACGA
AGCGGGACAGATGTAAATCAGTCAGTCAGTCAACTCACTGCTCCTGTCGA
CAAGGACGTAGTCATCGGATCGTATTCCACCACCGGACTCCCCACAATCC
ACGCCTCGCGATCTATGCAACATGTGCCTGTCTGGAAACCAGGTGCAGCA
GTTGACCTCACGGCGGGCGAGGGTGGTGCAGTCGGCACTCCCGGTGAGTG
CCTGATACCGTACATGCGATACGACCTTGGTCTGTTTTGCACTTGCCGAG
TGTGGTGGGGGCCGGTTCAGGCCGATTTTCGACACTGCGCACCGGTATTG
CAGTAGGCTCTGTCGCTGGTTACGTGGAGTAAATATGCGGTGTAGGCATC
CGCAACGCCAGCCCCCCGAATAGTCCCTGAAAACTGAAAGTAGTTGCAAG
CCGCGACAAGCATCACCTGACGTTTAGAAAAACGTCTTCCCCGTCGCTGT
GCGCATTATCGATGCAACACGTTCGCCGCAGCCCAGACACCGAAGAGGGG
GAGGAACACTAGGGAGAAGAGCTCGAACAAGGGCACGCCCGCGCGCCCCA
ACGGCGGTGAGTACCGGTCTGCGTATGTATGTGTGTGCACGATGAGATTC
AAAAATTCCTGACAAAACGGAAGTTCGACCATGGGTTGAGTCGGCGGTAC
GCACCACACAGGCGAAACCGCATGGAGTGACAACAGAATAAGTCTTTAAG
TGGGCTTCCCAGGTGTTTCGTCGCGCCGAATCATAAGATATTTATTTGTT
CGCTTTACGTGTTCCTCTCGTTCTCTTCTTCACTGGCATCAGGGCGCGCT
ATCAAGACGCGGCGCGAGCAGCAGGAGGCAGAGGCCGAAGAAACCCGCAC
TACCCTTGCAGCCACACCCATGCAGTTCACCGCCGTCAAGCAGGCCGTTG
AAACCAGCGTCAGTGAAGTGCTTGAGGAGAAGCTCGGGGAGGCGGCGGTT
CGGAAGAGCTTGGACAAGCATCTCACGTCGGACTCGAAAGCCATAGTTGA
AGCCGCCAAGACGAGAGGCTTTGACCTCCTTGTCAGAGAGCTGGAACCCC
AGCTTAAAGAGAGCGTGAAGGTATGAAGTTTAGGATGAGACTCGAGACGC
TTGTGCTGTGTGTATGCAAGTATAGTATTTTCCCAGCAGGATTGCCAACA
AAACTTAGACATTGAGGATGTCGTAACTGTTCAATTACATTATGGCAGGA
ACGCCGCGAATGTTAGTTTCCCCAAGCGTCCGGATCGTTGTTGACCCAGG
ACCGCCCCGAAACACCTTATTCGTTAGGCAATGGATGGCGCAACCGCGCG
TCTAAATGCGGTGAAGGGCGTCACGGCGGCGCCGCCGCCGGCGAGGGGGA
GGAAGAAGACGAAGGGGGCGAAGAAGGTGTGTCTTGCAAGTGTGGTGGCT
TTTTGGTGTCTCGTACTGGAAGTGTGGTGCGGCGCTGCTCGTTGTTTTTT
TATGATGGCCTGCGGAGGCGAGGGCCATCATAAAAAGGTATCCGCTAGAG
GGAGCGCCTCGTTCCTGAATGAGCCGAACGATTGTTCGTTGCGACTTGCC
GTAACATGTCCTTCGTGCAGGTCGACCCCGAGCAGGATCGCGAAGCCCTC
GACGCACCACTCTTGGAGAAGATGAAGCCAGTCTTGGACGGCATTAAAGC
ACCCCTCGACGGCCTAGGGGAAGCGTCCGAAATAATGCGGAAGGGGTTGG
ATGGTCTCCAGGTCACCGTGTCCGCCGATGCCGCTCTGGTCAAGGTGGAG
CAGGCCGCGATTAGGGCAGAGAACCTGGCGCTGAAGCAGGACGTGGCCGC
CCTTCAAAAGGCCATGGCCCACATGGAACTAAAGATGCAGGAGGGATTCG
CCCAGATGCAGGAGGGATTCGCCAAGACCTGCACGTTCTTGGCCACCCAG
ATGTAAGCTCGTTTTGGCATAGTAAGGGTGGTCTTTGGATGTAGTCGGGG
CAACAACGACTTGATTTCCCCACGGCTTCGCCGGTGCACCCGCACTAAAC
CCAATCCGGGTAAAATGTATACGACTTAGTCCGGTCCAAAATATCTACAT
CTCTCGTTTAGGTATCGATCCCAATGGTGACCGAGCATTTTTGTGCGTCT
GTTGTCTCTTTCGTGATATTCGCCTGCACGTTCTGTCGCCAGCAACCGGC
GCAGCCAGGAGGAGAGGGTTTCCAAAACGACCATCACAAGAAGCCGCGGT
GCGTTCCCGGGTGTGGAGCGGTTCGGCCAGGCACGGTGTCAGCCAACAGC
TAGTATTTCCCCCCCCCGATAGTTGGTTGAAAATGCGACAGTAAGCATGC
GTGTGCTGGTACATAGCAGTTTCCCAAGGTATGCAGGTATGTAGACCAAT
GCTGCTGGAAGATTAAATCATTCGCTGATTGCTGGGAACTACATCTTCCT
CTTCCCCATCCTTTCTGGCCGTCTTCAGGTGCGAGGTGTTCGGGGCCGTG
CGTCAGGACCCCAACGCCGGGTACATGACGCAACCTGCATTCGGCGGTGC
GGGGCAAGGGACGCAGCAGGTGGCTTGTAACCCGTTCGGCGGGTCTGTCG
GATACGCCACCGCCCCTGCCAACGTCGCCAACAACGTTGTGTTTGGTCAC
CCGGCCAGGGCCACACCCACGCTGGCGGTATGGCCGGACAGGGCCATACC
CACGCTGGTGGTATGGCCGGAATTCCCAATTTTTCCGGTGGAGGGGGGGG
TGTGAACATGCCATTCGCGTCGGCCCAAAACGTTAGGTTTGGATAAGTAC
GCAGTATACTTAGGGTTAGTTCGGTTTCCGCAGAGGTCGGTATGCGGGGT
ATGTGTGCCCCGCAATTTTGCGACACCTAGTGTGACGACTGGTGACGTGT
ACCCAGGGTTTGCCACAGCGTGCAGCCTGATGCCGGGGGGATATGACAGC
CAAGTATTCCAAATTGGAGCGCCAGGGCGTTGGTGTTGTCGCCGCGATTG
ATTCTAAAGCAACAACCCAATGCAACAACCCAACATGATGAAGACATGTT
ACATGCGCTCCAACGGTGAAGCCACTCCTACTCGGCCCTCACGGTCGACG
CTACACGTGCGACGCGACCAGAAAGCGTGTGATTGCGTGAAACGAAGAGA
CCATCCAACAATTGGCCGAAATCACGAGGACGAGCCTATTCTGAGACTTA
TCGCCAAAAACTATACACGTGGATGGTTTTCGACTTTTCGCAGACTCAAA
ACAGACTTTTCGCGTAGCCATGAGAACGTCCACAGGTGTGTTGCCGTGTT
GCCGTGTTGCCCCACACGTACCTACCTGCCATCTCACACGACATGGGGAT
CGTCAAGCTGTCACCCAAACTGAAAGTGCTCTGCGGCTTGCAAGCGAACC
TCGAGACAGACAAGAACCTAGAGCTGGTAATCGATGGTGGATTCCTTCTT
CATAAGTGTGCCTCGAGAGGCGATGCTGCCGAAAAATTGGTGCTCAACAA
CGACGTGAATGGAATTGCACGACAGTGTGCCCGCGAGATCGAGAGGTTCG
AGAAACGAGGCCTCGCTGTCTGGTTGGTGTTTGACGGCTGTCCACCGCCG
GCTAAGGGTTGCACGGGGGACGGACGCAGAGAGACGCGAGAGGGATACGA
GAGGGACGCTCGCCGCCTGCTAGGAGAAGCTGGAGCCATGGCGCAAGTCC
ACAAGCTGTGTGCTCAAGCATGCTCTTTCGGCCCGCGTACGGTAGCTCGG
ATCGCGACTCTTCTGCGGCCTATGATAAAAGGCCGTATCATGACCGCTCC
AGGCGAGGCTGATCCACAGATTGCCGTAGTCGAGGAAACGATAAGGGCGC
GGGGGGCAGACGTCATGGTCTACGGAAATGACAGCGACTTGGCTGTCTTG
GGTGTCCGGAAGCTCCTCCATAAAATTAAAGAACGGCATGGTGTGCTGAC
CGGATGGTTTTACGACTTGAGGTTACTTATCGAACCCTCTACGTGGGTCT
TCACGAAGGACTCCCCCGCATGCCTTCCTTCGTCAGCTCCACGGTCTACC
GCCAGAGCCGGACGAGAAGTTCATCAGCACACCTCCGTTGGGCCCTGAAG
CTGTGCGAGAACGATTCGTCCACTACGCGATGGTGGCAGGAAACGACTTC
GCCAAATTTCAAAACGTCGGTCCTATTGCAGCGGCAAAGCTAGCCCTGCC
ACGCGTCCAGGACAGGGCGTCTGGCCAGCCGGTCGTGCGGTTTGAGGAAG
TAGTAGAGAGCCTTGTAGCAGGAGTCGTGCGCCTGTCGAAGGAGGGGGAT
TCCCCTGAAGCCCGCGCTGCGGTGGAGAAGAAGTTGCGGGTGGCGCACGC
GATGTTCCGTCATGCAGTCGTGTGGGAGCCTGACACCGGGCTGCTGCAGC
ATCGCTCTGGCGCTCAATCCACGGAGGACATCACCAACGCCACAGGTAAG
CCAACAGCTCTGGTATATATTCCGTACTCCGCATGACGCTACAAACGACC
CCACTTCCCTCCGTGAAGCGTATCTATGTAAGAGTAGGGTAACTGATGCA
GACGGTCGGATACGCTCTCACCCAAAACTATGGTAGTTTTATTTTACCAA
CAACAAATTCTCTTTTGTGATCGGGAGGAGGAGTGTTCCAGCGAGCCGCC
CCCCACTAAACGCTGTGCAGCATCATACATACGAGGATAATAGCCGACTA
AAGCACGCCCTTTCCGCACTCTGCTCGTCTAGGCAAGAGTACGGTACGTC
GAGCCAAGCGCGAGGCTGTGGCGGACCAAAGTTATAGGTGCACGCGAGTC
TGTGGCAATACCAAAGTTGTCGAAAAATCGCTGCCTCAATTCCCCCGGTC
TGTTCGCCTGAATTTGGATGGTATGATTATCGAGTCTACATGTAAATGCC
GGTGGACCTGCACCACAGGCATGTATGGCTGACCCTTTCCATTCGACCAC
CGCGTGACGCACAGGGACCCTGCGCTTTTCTTCGATCGCTTGCGACATCG
TGTGGGGAACGGTGTCGCCGACCGACGGCGAAGAGTGGAACCCTCCCCTG
GGGCAGGCGCCTACCGAACTACAGCGGCCCGACGGCCCGGTAAAGCGGAC
GGGGGCCCCTCTAGAATCGCTGGACGATCGTCCCGTCATGCGCCGGCGGG
ATGAAAATGTCCATCGAGAGCACGGCTTCAGCAAGCTGCCAGATAATGAC
GTCGACTTCAACTCCTGGAAGAATGATCAACTTAAGGAGTTTCTCAGCGT
AAGTGATTCGAAATAGTCACGCGGAATTGTTGGCTGGTTGAATGAAGTAC
CACACCCTCTCGAAAAGTACGTACGGCAGTATCCGCGACAGCAGGTGTTT
ACAGGTACCGATATACAACCGCCGTTCACCACGCGCCTTATCACGACGTT
AGAGGACGACAACTCATGCACTCACTGACGAATGAACGCCCATGCAACGC
ACGATCTCGTTCGGTGTCCGTAGGTGTTCAGGTGTTTGGACAACGCAGGC
GCCAGTAACTACAACAAGAGCAACCTCGTGCAACTGGCTGTGGACGTTGT
TCGGATGATTAAGAGGTGTGGGATGGTCAATCGCCTGACGGCGTTCCGCA
TTCCGTCGCCAACCTTACCAGCTTAGAGGAGAAAGAGAAGCTGGTTTTCC
GGATTTGCCCCCAGCGTCTGTACGCGTGAGGGACTGGGAGGTGTTGCGCG
ATTTCCTCCCTGAGATTTCGAAGGCCGTCATCCTCCGCTTCCTCCAAGAA
GTAAACCCAACCGCTAGCCTGAGTTCCAGGGTGTGGTACAGGGGGATGCA
GAGAGTCATGGATATGGGCAACCTCTCCAGGCTCTGGGCTGTGCCACCCC
AGCATGGCGTCATGTGGCTTGGCTTCAGGTGAGAGGTGCACTACGGGTTC
TGTATTTTAATTGCCCCAGCTACACTCGTGACTTGCTGTATTCAAATGAC
GCAGTCCCCTCGTCCTGTCATTGTGCGTTTTTTTATTTGTCGCGTGTTGA
TGCAGCCGCGGTGGCACAACAGAGAGTCGACGCCGGTGTTGATTTACAGT
GTACCATTTAGCTCCTGTAGTGCGTGCCTCCGGAATTGTGGTGATATGAT
TGTTCAGCCACACCACACACACACACACCTCCACCCGGTGCCGTTTAGGA
CCAATTGCGCTTTTTGAAATAGGCCCGAATTAACATGACTAGGCAGCACA
TCGTGTGCAACAGAAGAGCTCCGTGCGAGGCGAGGTGTCGTTTTCGCCTG
AATGGGACCGGGCATTGATTTTTGCACTGGAGGCTGAGTTTGCTCTTCAG
AAATCGACAAAACCGCCGAAAGGTACCGCCCTCTCCCTCTCACACCCCGT
CATCCACCCCG

Coding sequence (CDS) from alignment at C-linearis_contig101:14597..22757+

>mRNA_C-linearis_contig101.707.1 ID=mRNA_C-linearis_contig101.707.1|Name=mRNA_C-linearis_contig101.707.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1512bp|location=Sequence derived from alignment at C-linearis_contig101:14597..22757+ (Chordaria linearis ClinC8C monoicous)
ATGGGGATCGTCAAGCTGTCACCCAAACTGAAAGTGCTCTGCGGCTTGCA
AGCGAACCTCGAGACAGACAAGAACCTAGAGCTGGTAATCGATGGTGGAT
TCCTTCTTCATAAGTGTGCCTCGAGAGGCGATGCTGCCGAAAAATTGGTG
CTCAACAACGACGTGAATGGAATTGCACGACAGTGTGCCCGCGAGATCGA
GAGGTTCGAGAAACGAGGCCTCGCTGTCTGGTTGGTGTTTGACGGCTGTC
CACCGCCGGCTAAGGGTTGCACGGGGGACGGACGCAGAGAGACGCGAGAG
GGATACGAGAGGGACGCTCGCCGCCTGCTAGGAGAAGCTGGAGCCATGGC
GCAAGTCCACAAGCTGTGTGCTCAAGCATGCTCTTTCGGCCCGCGTACGG
TAGCTCGGATCGCGACTCTTCTGCGGCCTATGATAAAAGGCCGTATCATG
ACCGCTCCAGGCGAGGCTGATCCACAGATTGCCGTAGTCGAGGAAACGAT
AAGGGCGCGGGGGGCAGACGTCATGGTCTACGGAAATGACAGCGACTTGG
CTGTCTTGGGTGTCCGGAAGCTCCTCCATAAAATTAAAGAACGGCATGGT
GTGCTGACCGGATGGTTTTACGACTTGAGGTTACTTATCGAACCCTCTAC
GTGGGTCTTCACGAAGGACTCCCCCGCATGCCTTCCTTCGTCAGCTCCAC
GGTCTACCGCCAGAGCCGGACGAGAAGTTCATCAGCACACCTCCGTTGGG
CCCTGAATGGGGATCGTCAAGCTGTCACCCAAACTGAAAGTGCTCTGCGG
CTTGCAAGCGAACCTCGAGACAGACAAGAACCTAGAGCTGGTAATCGATG
GTGGATTCCTTCTTCATAAGTGTGCCTCGAGAGGCGATGCTGCCGAAAAA
TTGGTGCTCAACAACGACGTGAATGGAATTGCACGACAGTGTGCCCGCGA
GATCGAGAGGTTCGAGAAACGAGGCCTCGCTGTCTGGTTGGTGTTTGACG
GCTGTCCACCGCCGGCTAAGGGTTGCACGGGGGACGGACGCAGAGAGACG
CGAGAGGGATACGAGAGGGACGCTCGCCGCCTGCTAGGAGAAGCTGGAGC
CATGGCGCAAGTCCACAAGCTGTGTGCTCAAGCATGCTCTTTCGGCCCGC
GTACGGTAGCTCGGATCGCGACTCTTCTGCGGCCTATGATAAAAGGCCGT
ATCATGACCGCTCCAGGCGAGGCTGATCCACAGATTGCCGTAGTCGAGGA
AACGATAAGGGCGCGGGGGGCAGACGTCATGGTCTACGGAAATGACAGCG
ACTTGGCTGTCTTGGGTGTCCGGAAGCTCCTCCATAAAATTAAAGAACGG
CATGGTGTGCTGACCGGATGGTTTTACGACTTGAGGTTACTTATCGAACC
CTCTACGTGGGTCTTCACGAAGGACTCCCCCGCATGCCTTCCTTCGTCAG
CTCCACGGTCTACCGCCAGAGCCGGACGAGAAGTTCATCAGCACACCTCC
GTTGGGCCCTGA