Homology
BLAST of mRNA_C-linearis_contig101.707.1 vs. uniprot
Match:
A0A6H5KFX7_9PHAE (Exonuclease 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFX7_9PHAE)
HSP 1 Score: 186 bits (473), Expect = 1.280e-50
Identity = 99/226 (43.81%), Postives = 134/226 (59.29%), Query Frame = 0
Query: 1 MGIVKLSPKLKVLCGLQANLE-TDKNLELVIDGGFLLHKCASRGDAAEKLVLNNDVNGIARQCAREIERFEKRGLAVWLVFDGCPPPAKGCTGDGRRETREGYERDARRLLGEAGAMAQVHKLCAQACSFGPRTVARIATLLRPMIKGRIMTAPGEADPQIAVVEETIRARGADVMVYGNDSDLAVLGVRKLLHKIKERH-GVLTGWFYDLRLLIEPSTWVFTKDS 224
MGI+ LS K + L NL+ + + +++DGGFLLH+C +R AA L+L++DV + ++CA E+ RFE RG V +V DG PPAK T + RR RE +AR L G + +++K + AC F R VAR+ATLLRP I G + AP EADPQI + ++ G V VY NDSDL VLGVR LL ++ G LTG RL+ +P W F D+
Sbjct: 1 MGILSLSKHAKSVGSLSVNLQHAEHDDRIIVDGGFLLHRCCTRRTAARDLLLHDDVAPLVKECAAEVSRFESRGFKVTVVLDGSTPPAKKSTSEARRTKREAAASEARELQRTGGRLTEINKKASNACVFDSRVVARVATLLRPQIAGEVYIAPREADPQIVIFQDIYLETGCTVYVYANDSDLIVLGVRSLLWDVRGTDAGNLTGVCIRSRLIFQPPEWAFAIDA 226
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig101.707.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 1
M G I V K L S P K L K V L C G L Q A N L E T D K N L E L V I D G G F L L H K C A S R G D A A E K L V L N N D V N G I A R Q C A R E I E R F E K R G L A V W L V F D G C P P P A K G C T G D G R R E T R E G Y E R D A R R L L G E A G A M A Q V H K L C A Q A C S F G P R T V A R I A T L L R P M I K G R I M T A P G E A D P Q I A V V E E T I R A R G A D V M V Y G N D S D L A V L G V R K L L H K I K E R H G V L T G W F Y D L R L L I E P S T W V F T K D S P A C L P S S A P R S T A R A G R E V H Q H T S V G P * 20 40 60 80 100 120 140 160 180 200 220 240 Expect = 1.28e-50 / Id = 43.81 Sequence A0A6H5KFX7_9PHAE
Match Name E-value Identity Description
A0A6H5KFX7_9PHAE 1.280e-50 43.81 Exonuclease 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
M G I V K L S P K L K V L C G L Q A N L E T D K N L E L V I D G G F L L H K C A S R G D A A E K L V L N N D V N G I A R Q C A R E I E R F E K R G L A V W L V F D G C P P P A K G C T G D G R R E T R E G Y E R D A R R L L G E A G A M A Q V H K L C A Q A C S F G P R T V A R I A T L L R P M I K G R I M T A P G E A D P Q I A V V E E T I R A R G A D V M V Y G N D S D L A V L G V R K L L H K I K E R H G V L T G W F Y D L R L L I E P S T W V F T K D S P A C L P S S A P R S T A R A G R E V H Q H T S V G P * 20 40 60 80 100 120 140 160 180 200 220 240 Expect = 7.1E-24 / Score = 86.3 Score = Score = Score = Sequence G3DSA:3.40.50.1010 PTHR11081 PTHR11081:SF8 SSF88723
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_C-linearis_contig101.707.1 ID=prot_C-linearis_contig101.707.1|Name=mRNA_C-linearis_contig101.707.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=252bp back to top
Annotated Terms
The following terms have been associated with this polypeptide: