mRNA_C-linearis_contig101.706.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-linearis_contig101.706.1 vs. uniprot
Match: D8LE05_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE05_ECTSI) HSP 1 Score: 60.8 bits (146), Expect = 1.350e-10 Identity = 26/32 (81.25%), Postives = 30/32 (93.75%), Query Frame = 1 Query: 40 MEMARFTIYLTVPVIVITICSDPKNMNMLLRG 135
MEMARF +Y++VPV+VITICSDPKNMN LLRG
Sbjct: 1 MEMARFFMYVSVPVVVITICSDPKNMNTLLRG 32 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig101.706.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig101.706.1 >prot_C-linearis_contig101.706.1 ID=prot_C-linearis_contig101.706.1|Name=mRNA_C-linearis_contig101.706.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=46bp MRWMHPNPRKRYGMEMARFTIYLTVPVIVITICSDPKNMNMLLRG*back to top mRNA from alignment at C-linearis_contig101:12390..13418- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig101.706.1 ID=mRNA_C-linearis_contig101.706.1|Name=mRNA_C-linearis_contig101.706.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1029bp|location=Sequence derived from alignment at C-linearis_contig101:12390..13418- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig101:12390..13418- >mRNA_C-linearis_contig101.706.1 ID=mRNA_C-linearis_contig101.706.1|Name=mRNA_C-linearis_contig101.706.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=276bp|location=Sequence derived from alignment at C-linearis_contig101:12390..13418- (Chordaria linearis ClinC8C monoicous)back to top |