Homology
BLAST of mRNA_C-linearis_contig101.706.1 vs. uniprot
Match: D8LE05_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE05_ECTSI) HSP 1 Score: 60.8 bits (146), Expect = 1.350e-10 Identity = 26/32 (81.25%), Postives = 30/32 (93.75%), Query Frame = 0 Query: 14 MEMARFTIYLTVPVIVITICSDPKNMNMLLRG 45
MEMARF +Y++VPV+VITICSDPKNMN LLRG
Sbjct: 1 MEMARFFMYVSVPVVVITICSDPKNMNTLLRG 32
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig101.706.1 vs. uniprot
Analysis Date: 2022-09-16 ( Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
| Match Name | E-value | Identity | Description | |
|---|
| D8LE05_ECTSI | 1.350e-10 | 81.25 | Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... | [more] |
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_H_REGION | Signal peptide H-region | coord: 19..30 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE | Signal Peptide | coord: 1..34 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_N_REGION | Signal peptide N-region | coord: 1..18 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_C_REGION | Signal peptide C-region | coord: 31..34 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 35..45 |
| None | No IPR available | TMHMM | TMhelix | | coord: 12..34 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig101.706.1 ID=prot_C-linearis_contig101.706.1|Name=mRNA_C-linearis_contig101.706.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=46bp
MRWMHPNPRKRYGMEMARFTIYLTVPVIVITICSDPKNMNMLLRG* back to top
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