mRNA_C-linearis_contig10.607.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig10.607.1
Unique NamemRNA_C-linearis_contig10.607.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig10.607.1 vs. uniprot
Match: D7G8Q7_ECTSI (Peptidylprolyl isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Q7_ECTSI)

HSP 1 Score: 473 bits (1216), Expect = 1.280e-165
Identity = 236/326 (72.39%), Postives = 273/326 (83.74%), Query Frame = 1
Query:    1 MTRRGLSRVVARCDFVCASLYALIFLSLDAVGFRAAPWVSRRGTRSRDTCVRVAAWRGKGEPRGKEQEAADRISLAAPCSRKGLLHSMGLIGSAIVCGQALAERTEAADVRPEE-VPTVGKITKSGVKYFDYRVGEGPTPSWGQDCIIRFTMYGRSSPDDKLIKIQSSDNNKEPYLFKHGNGFQIKGMEEGMHSMSVGGKRRVIMPQGLGYTVQGLGPYPADPRKRDVLVQVLTSFEKTTTGELVMDIELLEAFDDEADQGYYEDAAVTPEQLQDLIQETGQFAGGVPLEKFKGQIASPMEDT-SSGLKKSDGGLPGQLGKDVLGG 972
            M R  LSRV+ +C   C +L  L+FL L+ +GFRA+PWV    T SR+TCV + A RG GE RG+ +E     +   PCSR  LL SMGL+GSA++ GQAL+ER EAA ++ EE VPTVGKITK+G+KYFD+RVGEGP+P WGQDCIIRFTMYGRS+PD+KLIKIQSSDNNKE YLFKHGNGFQIKGMEEGMHSM VGGKRRVIMPQ +GY+VQGLGPYPADPRKRD+LV+VLTSFEKTTTGELVMDIELL+AFDDEADQGYYED AVTPEQLQD+++ETG+F+GG P+EK  GQ+ASPMEDT SS  KK   GLPGQLGKDV+GG
Sbjct:    1 MARLELSRVIPKC-IACTALVVLMFLDLEVLGFRASPWVRSTATVSRETCVALPAGRGDGEWRGEGREPETGGNTGVPCSRMDLLRSMGLVGSAVIGGQALSERAEAAGMQEEEEVPTVGKITKAGIKYFDFRVGEGPSPRWGQDCIIRFTMYGRSTPDEKLIKIQSSDNNKEKYLFKHGNGFQIKGMEEGMHSMRVGGKRRVIMPQSMGYSVQGLGPYPADPRKRDILVEVLTSFEKTTTGELVMDIELLDAFDDEADQGYYEDTAVTPEQLQDIVRETGRFSGGQPMEKLPGQLASPMEDTTSSAAKKGGAGLPGQLGKDVMGG 325          
BLAST of mRNA_C-linearis_contig10.607.1 vs. uniprot
Match: A0A835YXX3_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXX3_9STRA)

HSP 1 Score: 203 bits (517), Expect = 6.080e-61
Identity = 115/222 (51.80%), Postives = 150/222 (67.57%), Query Frame = 1
Query:  241 RKGLLHSMGLIGS-AIVCGQALAERTEAADVRPEEVPTVGKITKSGVKYFDYRVGEGPTPSWGQDCIIRFTMYGRSSPDDKLIKIQSSDNNKEPYLFKHGNGFQIKGMEEGMHSMSVGGKRRVIMPQGLGYTVQGLGPYPADPRKRDVLVQVLTSFEKTTTGELVMDIELLEAFDDEADQGYYEDAAVTPEQLQDLIQETGQFAGG-VPLEKFKGQIASPME 900
            R+ L  + G++ S AI  G A A+++E       E  TVGKITKSGVKYFD   G G    WG+ C I+FT+YGR + + +L ++ SSDNN EP+LFKHGNG QIKG+EEGMH+M VGGKRR+I+P  LGYTV GLGP+PA    R  L ++L S    T G+LVMD+ELL+AFDDEAD GYY D+++  E++QD+++ T     G   L+   GQ  SP E
Sbjct:   24 RQALATAAGVLASLAIRPGSAQAKQSEY------EAATVGKITKSGVKYFDAAEGSGDKIQWGKMCSIKFTLYGRPAQEGRLQRLDSSDNNGEPFLFKHGNGRQIKGLEEGMHTMRVGGKRRIIIPPTLGYTVSGLGPFPAGALSRMALDKMLDSLG--TNGQLVMDVELLDAFDDEADLGYYTDSSLNLEEMQDVMRVTDLLLDGKAKLQALPGQ--SPTE 235          
BLAST of mRNA_C-linearis_contig10.607.1 vs. uniprot
Match: A0A4D9D9B5_9STRA (Peptidylprolyl isomerase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9B5_9STRA)

HSP 1 Score: 154 bits (389), Expect = 8.220e-42
Identity = 81/177 (45.76%), Postives = 111/177 (62.71%), Query Frame = 1
Query:  295 QALAERTEAADVRPEEVPTVGKITKSGVKYFDYRVGEGPTPSWGQDCIIRFTMYGRSSPDDKLIKIQSSDNNKEPYLFKHGNGFQIKGMEEGMHSMSVGGKRRVIMPQGLGYTVQGLGPYPADPRKRDVLVQVLTSFE-KTTTGELVMDIELLEAFDDEADQGYYEDAAVTPEQLQD 822
            QA A R +  D+     P V   TKSG++Y+D R GEG +P WGQ  II++  Y R+SP  KL+    +   K PYL KHGNG  I+G++EG+HSM +GG RR+++P  LGYT  GLGP P +  +R +LV+ L   E     GE++ D+EL+  +DDEAD GYY+D    P  LQ+
Sbjct:   19 QAAANRVQDMDL-----PPVAFETKSGLRYYDVRKGEGMSPKWGQVAIIQYEGYVRASPFSKLVLFDDTYARKTPYLVKHGNGRVIRGLDEGIHSMKLGGLRRIVVPLELGYTKTGLGPLPPNAFRRKILVRELGKAEVNDPPGEIIYDVELVSLYDDEADLGYYDDLTFDPGYLQE 190          
BLAST of mRNA_C-linearis_contig10.607.1 vs. uniprot
Match: W7TQC7_9STRA (Peptidylprolyl isomerase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQC7_9STRA)

HSP 1 Score: 154 bits (388), Expect = 2.830e-40
Identity = 77/166 (46.39%), Postives = 108/166 (65.06%), Query Frame = 1
Query:  328 VRPEEVPTVGKITKSGVKYFDYRVGEGPTPSWGQDCIIRFTMYGRSSPDDKLIKIQSSDNNKEPYLFKHGNGFQIKGMEEGMHSMSVGGKRRVIMPQGLGYTVQGLGPYPADPRKRDVLVQVLTSFE-KTTTGELVMDIELLEAFDDEADQGYYEDAAVTPEQLQD 822
            V+  ++P V   TKSG++Y+D R GEG +P WGQ  II++  Y R+SP  KL+    +   K PYL KHGNG  I+G++EG+HSM +GG RR+++P  LGYT  GLGP P +  +R +LV+ L   E     GE++ D+EL+  +DDEAD GYY+D    P  LQ+
Sbjct:  152 VQDMDLPAVAFETKSGLRYYDVRKGEGMSPKWGQVAIIQYEGYVRASPFSKLVLFDDTYARKTPYLVKHGNGRVIRGLDEGIHSMKLGGLRRIVVPLELGYTKTGLGPLPPNAFRRKILVRELGKAEVNDPPGEIIYDVELVSLYDDEADLGYYDDLTFDPGYLQE 317          
BLAST of mRNA_C-linearis_contig10.607.1 vs. uniprot
Match: A0A6U3SBH4_9STRA (Peptidylprolyl isomerase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3SBH4_9STRA)

HSP 1 Score: 145 bits (365), Expect = 2.110e-37
Identity = 84/181 (46.41%), Postives = 111/181 (61.33%), Query Frame = 1
Query:  364 TKSGVKYFDYRVGEGPTPSWGQDCIIRFTMYGR---SSPDDKLI--KIQSSDNNKEPYLFKHGNGFQIKGMEEGMHSMSVGGKRRVIMPQGLGYTVQGLGPYPADPRKRDVLVQVLTSFEKTTTGELVMDIELLEAFDDEADQGYYEDAAVTPEQLQDLIQETGQFAGGVPLEKFKGQIAS 891
            TKSG+KY + R G GPTP +GQ C I +  Y +   S   DK I  K+Q  D++   +L KHGNG  + G++EG+H++ VGGKRR+I+P  LG+   GLGP P  P  R  L Q+L    +   G LV D+EL  AFDDEADQGYYED ++TPEQ Q L      F  G   E+ K ++A+
Sbjct:  132 TKSGLKYIELREGTGPTPKYGQLCSISYKAYIKLPDSVSSDKKISTKLQEFDSDNA-FLVKHGNGRILPGLDEGLHTIRVGGKRRIIVPPKLGFVSNGLGPLPETPWGRYKLNQLLNQMVEVKGGNLVFDVELRSAFDDEADQGYYEDRSLTPEQFQTL---RNNFERGAREEREKQKMAA 308          
BLAST of mRNA_C-linearis_contig10.607.1 vs. uniprot
Match: A0A7S2HMU8_9STRA (Peptidylprolyl isomerase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HMU8_9STRA)

HSP 1 Score: 137 bits (346), Expect = 3.380e-35
Identity = 69/174 (39.66%), Postives = 108/174 (62.07%), Query Frame = 1
Query:  340 EVPTVGKITKSGVKYFDYRVGEGPTPSWGQDCIIRFTMYGRSSPDDKLIKIQSS-DNNKEPYLFKHGNGFQIKGMEEGMHSMSVGGKRRVIMPQGLGYTVQGLGPYPADPRKRDVLVQVLTSFEKTTTGELVMDIELLEAFDDEADQGYYEDAAVTPEQLQDLIQETGQFAGGV 858
            E+P+ G  +KSG+KYFDY VG G  P +GQ  I+++    +++  +KL    SS +     Y+ KHGNG  + G++EG+H+M VGGKRR+++P  LGYTV GLGP+P +   R +L ++L   + +  G +  D+ L++A+DD+AD GYY+D  + P  L  +     +F   V
Sbjct:   81 ELPSSGFASKSGMKYFDYEVGPGSPPKYGQVIIVKYIASAKATGKEKLQIFDSSFERGGGDYIMKHGNGRCVLGLDEGIHTMRVGGKRRILVPPNLGYTVPGLGPFPPEAADRRILNKILAKMDDS--GYVAFDVMLIDAYDDDADAGYYDDTDLPPGVLDQVYGNIERFKQAV 252          
BLAST of mRNA_C-linearis_contig10.607.1 vs. uniprot
Match: A0A7S4NDU7_9STRA (Peptidylprolyl isomerase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NDU7_9STRA)

HSP 1 Score: 136 bits (343), Expect = 2.830e-34
Identity = 98/251 (39.04%), Postives = 128/251 (51.00%), Query Frame = 1
Query:  118 SRRGTRSRDTCVRVAAWRGKGEPRGKEQEAADRISLAAPCSRKGLLHSMGLIGSAIVCGQALAERTEAADVRPEEVPTVGKIT----KSGVKYFDYRVGEGPTPSWGQDCIIRFTMYGRSSPDDK--LIKIQSSDNNKEPYLFKHGNGFQIKGMEEGMHSMSVGGKRRVIMPQGLGYTVQGLGPYPADPRKRDVLVQVLTSFEKTTTGELVMDIELLEAFDDEADQGYYEDAAVTPEQLQDLIQETGQFAG 852
            SRR    R   V  AA      PR   Q  AD   +  P    GL  S  L    +V G A             E P  G +T    KSG+KY + R G GPTP +GQ   I +  Y +  PD K    K+   D+++  YL KHGNG  I G++EG+H+M +GGKRR+I+P  LGY   G+GP P  P  R  L  +L    +   G +V D+EL  A DDEADQGYYED +++PE   D +++  Q AG
Sbjct:   60 SRREALLRSASVAAAAAAALSAPR---QALADIEGVVTP---SGLTESGALEVPKVVPGGA------------PEAPAGGGVTLFQTKSGLKYIELREGSGPTPRYGQLVSISYKAYVKL-PDIKGQTQKLDEFDSDRA-YLIKHGNGRTIPGLDEGLHTMKIGGKRRIIIPPKLGYVSPGVGPIPEGPLARRKLNSLLDKMIEVRGGNVVFDVELRSAMDDEADQGYYEDGSLSPEDF-DTLRKNLQQAG 289          
BLAST of mRNA_C-linearis_contig10.607.1 vs. uniprot
Match: A0A7S1U697_9STRA (Peptidylprolyl isomerase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U697_9STRA)

HSP 1 Score: 127 bits (320), Expect = 1.470e-31
Identity = 72/187 (38.50%), Postives = 100/187 (53.48%), Query Frame = 1
Query:  334 PEEVPTVGKITKSGVKYFDYRVGEGPTPSWGQDCIIRFTMYGRSSPDDKLIKIQSSDNNKEPYLFKHGNGFQIKGMEEGMHSMSVGGKRRVIMPQGLGYTVQGLGPYPADPRKRDVLVQVLTSFEKTTTGELVMDIELLEAFDDEADQGYYEDA--AVTPEQLQDLIQETGQFAGGVPLEKFKGQIA 888
            P      G  T+SGVKY++   G GPTP WG   II+FT Y   S +D+ +KI+  + N   Y+FKHGNG Q++G+E+G+HSM +G  RR+I+P  L YT   +GP P        L   L +      G+++ D+ L+  F DEAD+GYY D   AV P               GVP+   KG  +
Sbjct:   70 PSAAGKPGFQTESGVKYYELTEGSGPTPQWGDTTIIKFTQYISRSANDEPVKIEDWNGNN--YVFKHGNGRQLEGLEDGIHSMKIGTTRRIIVPARLAYTTNQVGPLPRSTANLQKLTTELDAM--VNGGQIIFDVTLVNTFRDEADRGYYADETPAVDP--------------NGVPINIIKGSAS 238          
BLAST of mRNA_C-linearis_contig10.607.1 vs. uniprot
Match: A0A2V3IRB8_9FLOR (Peptidylprolyl isomerase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRB8_9FLOR)

HSP 1 Score: 127 bits (318), Expect = 3.700e-31
Identity = 70/174 (40.23%), Postives = 98/174 (56.32%), Query Frame = 1
Query:  316 EAADVRPEEVPTVGKITKSGVKYFDYRVGEGPTPSWGQDCIIRFTMYGRSSPDDKLIKIQSS-DNNKEPYLFKHGNGFQIKGMEEGMHSMSVGGKRRVIMPQGLGYTVQGLGPYPADPRKRDVLVQVLTSFEKTTTGELVMDIELLEAFDDEADQGYYEDAAVTPEQLQDLIQE 834
            E  + R E+ P  G  T SG+K+FD+  GEGPTP WG    I++ +Y  S   D L+K  S+ D  K  YL  HGNG  I G+EE +H+MSVGG+RR I+P  +GY+  G  P P   ++R   +  +   +    G +V DIEL     D  D+GYY D   T E+L  +++E
Sbjct:   64 EIENRRDEDRPLTGFQTISGLKFFDFTRGEGPTPQWGDILNIQYVLYTVSPSGDALVKHDSTYDRGKHGYLIHHGNGEHILGLEEALHTMSVGGRRRAIVPLKIGYSKNGFAPIPPSFQRRKEFIDAINDGD----GTVVFDIELRTIKKDPDDRGYYTDITPTDEELLRIVEE 233          
BLAST of mRNA_C-linearis_contig10.607.1 vs. uniprot
Match: A0A6U1ZUH9_TRICV (Peptidylprolyl isomerase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A6U1ZUH9_TRICV)

HSP 1 Score: 124 bits (310), Expect = 1.330e-30
Identity = 73/174 (41.95%), Postives = 101/174 (58.05%), Query Frame = 1
Query:  313 TEAADVRPEEVPTVGKI-TKSGVKYFDYRVGEGPTPSWGQDCIIRFTMYGRSSPD--DKLIKIQSSDNNKEPYLFKHGNGFQIKGMEEGMHSMSVGGKRRVIMPQGLGYTVQGLGPYPADPRKRDVLVQVLTSFEKTTTGELVMDIELLEAFDDEADQGYYEDAAVTPEQLQDL 825
            T AA+  P +   V    TKSG+KY + R G GPTP +GQ   I +  Y +  PD   K  K++  D+++  YL KHGNG  + G++EG+H+M +GGKRR+I+   LGY   GLGP P  P  R  L  +L    +   G +V D+EL    DDEAD GYY D++++PE    L
Sbjct:   11 TPAANAAPTQEGGVTLFKTKSGLKYIELREGSGPTPRYGQLVSISYKAYVKL-PDIKGKPSKLEEFDSDRG-YLIKHGNGRIVPGLDEGIHTMKLGGKRRIIVSPKLGYVEPGLGPIPEGPLARMRLNNLLDKMVEVRGGNVVFDVELRTVMDDEADLGYYGDSSISPEDFNTL 182          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.607.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8Q7_ECTSI1.280e-16572.39Peptidylprolyl isomerase n=1 Tax=Ectocarpus silicu... [more]
A0A835YXX3_9STRA6.080e-6151.80Peptidylprolyl isomerase n=1 Tax=Tribonema minus T... [more]
A0A4D9D9B5_9STRA8.220e-4245.76Peptidylprolyl isomerase n=1 Tax=Nannochloropsis s... [more]
W7TQC7_9STRA2.830e-4046.39Peptidylprolyl isomerase n=1 Tax=Nannochloropsis g... [more]
A0A6U3SBH4_9STRA2.110e-3746.41Peptidylprolyl isomerase n=1 Tax=Ditylum brightwel... [more]
A0A7S2HMU8_9STRA3.380e-3539.66Peptidylprolyl isomerase n=1 Tax=Dictyocha speculu... [more]
A0A7S4NDU7_9STRA2.830e-3439.04Peptidylprolyl isomerase n=1 Tax=Odontella aurita ... [more]
A0A7S1U697_9STRA1.470e-3138.50Peptidylprolyl isomerase n=1 Tax=Phaeomonas parva ... [more]
A0A2V3IRB8_9FLOR3.700e-3140.23Peptidylprolyl isomerase n=1 Tax=Gracilariopsis ch... [more]
A0A6U1ZUH9_TRICV1.330e-3041.95Peptidylprolyl isomerase n=1 Tax=Trieres chinensis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:2846187..2849203 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score476.9
Seed ortholog evalue7.7e-132
Seed eggNOG ortholog2880.D7G8Q7
KEGG koko:K01802
Hectar predicted targeting categorysignal peptide
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009532,GO:0009534,GO:0009536,GO:0009543,GO:0009570,GO:0009579,GO:0031976,GO:0031977,GO:0031978,GO:0031984,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464
EggNOG free text desc.histone peptidyl-prolyl isomerization
EggNOG OGsCOG0545@1,KOG0552@2759
Ec32 ortholog descriptionFKBP domain protein
Ec32 orthologEc-22_002640.1
EC5.2.1.8
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons5
Model size975
Cds size975
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.607.1prot_C-linearis_contig10.607.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig10 2846187..2849203 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927345.0662973-CDS-C-linearis_contig10:2846186..28464471622927345.0662973-CDS-C-linearis_contig10:2846186..2846447Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2846187..2846447 +
1690879641.1453977-CDS-C-linearis_contig10:2846186..28464471690879641.1453977-CDS-C-linearis_contig10:2846186..2846447Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2846187..2846447 +
1622927345.0761647-CDS-C-linearis_contig10:2847080..28472381622927345.0761647-CDS-C-linearis_contig10:2847080..2847238Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2847081..2847238 +
1690879641.1603482-CDS-C-linearis_contig10:2847080..28472381690879641.1603482-CDS-C-linearis_contig10:2847080..2847238Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2847081..2847238 +
1622927345.0872412-CDS-C-linearis_contig10:2847791..28479211622927345.0872412-CDS-C-linearis_contig10:2847791..2847921Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2847792..2847921 +
1690879641.1773798-CDS-C-linearis_contig10:2847791..28479211690879641.1773798-CDS-C-linearis_contig10:2847791..2847921Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2847792..2847921 +
1622927345.0991378-CDS-C-linearis_contig10:2848302..28484431622927345.0991378-CDS-C-linearis_contig10:2848302..2848443Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2848303..2848443 +
1690879641.1854026-CDS-C-linearis_contig10:2848302..28484431690879641.1854026-CDS-C-linearis_contig10:2848302..2848443Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2848303..2848443 +
1622927345.15007-CDS-C-linearis_contig10:2848918..28492031622927345.15007-CDS-C-linearis_contig10:2848918..2849203Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2848919..2849203 +
1690879641.1962907-CDS-C-linearis_contig10:2848918..28492031690879641.1962907-CDS-C-linearis_contig10:2848918..2849203Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2848919..2849203 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig10.607.1

>prot_C-linearis_contig10.607.1 ID=prot_C-linearis_contig10.607.1|Name=mRNA_C-linearis_contig10.607.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=325bp
MTRRGLSRVVARCDFVCASLYALIFLSLDAVGFRAAPWVSRRGTRSRDTC
VRVAAWRGKGEPRGKEQEAADRISLAAPCSRKGLLHSMGLIGSAIVCGQA
LAERTEAADVRPEEVPTVGKITKSGVKYFDYRVGEGPTPSWGQDCIIRFT
MYGRSSPDDKLIKIQSSDNNKEPYLFKHGNGFQIKGMEEGMHSMSVGGKR
RVIMPQGLGYTVQGLGPYPADPRKRDVLVQVLTSFEKTTTGELVMDIELL
EAFDDEADQGYYEDAAVTPEQLQDLIQETGQFAGGVPLEKFKGQIASPME
DTSSGLKKSDGGLPGQLGKDVLGG*
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mRNA from alignment at C-linearis_contig10:2846187..2849203+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig10.607.1 ID=mRNA_C-linearis_contig10.607.1|Name=mRNA_C-linearis_contig10.607.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3017bp|location=Sequence derived from alignment at C-linearis_contig10:2846187..2849203+ (Chordaria linearis ClinC8C monoicous)
ATGACGCGACGGGGGCTATCGCGCGTTGTAGCAAGATGCGATTTCGTGTG CGCATCTCTGTATGCGCTGATATTCCTCAGTCTCGATGCTGTCGGCTTCA GAGCAGCACCTTGGGTATCCCGGCGAGGCACTCGAAGCAGAGATACATGT GTCAGGGTGGCCGCGTGGAGAGGCAAGGGGGAACCGAGGGGGAAAGAGCA AGAAGCCGCCGATAGAATCAGCCTGGCTGCACCCTGCTCACGGAAAGGTC TACTTCATTCGGTCAGTCTTGGTGCTTGAAAGTACTTTGTTTGAGTCTCC TTTCATGAAAGCTCACGTCTACTTCGAAAAAATGTACATAGTTCGACGTA ATGATGTGTTGAGAGCGGCTGGAGACTCAAACGGGCGGTAGCCGCACACA CACCACTCGTTGCGTGCAGAACCTGGAGTCTACCAACGTATCCAGGATAT ACAGCCCTGTTTTTTGTATGTGATGTAGCCTTACCTGTGATGTTGCCTGT GCAACTGGCTGTAGATAGCTTGCCTTGGTGTTGGAAGGAGAGAATTGGGG TGCAACAAACATGAAGAGGGAGTCGAAAACCCGTGTTTGCGTCTGGCACT TGCCTCGGGGTGACGGGTGGCGCGTAGGATGCCTTCACAAGCAAGTCGGA TAGACTTTATTCCCGCGTACTATTTAGGCACTACACACGCTGCAGGATAA TGCACACGTTGTGCATCCCTGCCCTTGGAAGAAAAACCATTTTGTCAAGT ACGTAGACGATGTAGACTACATGCGATGTACTGCTGTGGATCAAGAGGTT CCAGGTAGAGGGTGGGGGCAGCGATTCTTGGCGCAGTATTCAGTCTGTAT CGTTACGTCTGCCCGGCCCATAATCCACACACTCAACAAACCAGATGGGG CTCATTGGATCTGCCATCGTGTGCGGACAAGCGCTAGCTGAACGGACGGA AGCTGCAGACGTGCGGCCGGAAGAGGTGCCGACGGTTGGAAAAATAACCA AAAGTGGCGTCAAGTACTTCGACTACCGCGTCGGGGAAGGGCCGACCCCT AGGTGCACATGATTTCAACCACACCCCGCACATGGCACGCGTTGTTTTCA TACCCCTCTATCCACCTGCATTCCTCGTGCACGGAATCCTACAGCTCGCT AGCACGGCCTAACGGTGTGGGGTGCTTTGAGCAGCTACTCCAGAGGATTG TTGCAGTTTGGCATGTTTGTGGGGTGTTCTTGGCGTTCTTACAGCATCAG CTACATCAAAGCTGGGAGGGCATCGGCATTCGGCTTGTTTTCATTCATCG CTTCCCCACGTCTAAGGTTGCTCCTAGCATCTAATTATTTGCGGCGTTAT AACGGTCGCCTCCAAGGGATGTTCTTGTGTTTAGCAAGGATGTGGGAAAG CAGGCCTCTCAATCCACGAGGCGGGGTTGACAAGACTTCTTCGTAAGACT CCTTGATGAAATAAACGGCATATCCAAATCCGTGCGGAATACCTGTAACT GGCCCTCCTTCTCTTCCTCGAAAATTCAACGTTTGGGGACTTGCTACAAA AACTATAACTCCGCTAACCTATATATCCTCCACGCTCGCACCGAATAAAC CTCAGTTGGGGCCAAGACTGCATCATCCGGTTTACCATGTACGGACGATC TAGCCCAGACGATAAGTTGATTAAGATCCAGTCATCCGACAACAACAAGG AGCCTTATCTATTCAAGCACGGGAATGGTTTCCAGGTTCGTTCATTTGGC GTGGTTCGCGTTTTGGCAACGACCATGTTGGTGTGGCCACGGACAAGAAC TGTGGGTACACTCCCATATTGTTTTCACGCATAGATGTCTGCTTTTTGTT GGCGGCAATGTGCAAGTTGCCCAGCGTTAGAGCTTTTTTTACTGTCGATA ACTTCGAAGTATGTGCCATGAAGCAGTAGCAGCTCAGGTCTGTCTGGGTG CGAAGACATGTTTGGGGTCGACTCGGAGTTTGCAGGTCACGCTGTTTTTC TCTATCGGACATCGTAAACGCTATTTCACTCAAGTGCACATAAACTTACC CGGTTTGCCTCGTTGTTTCGCCTCGCCTCGCCTCAAATATTCCATGTGTG AAACACGGCCGCACAGATCAAGGGAATGGAAGAGGGCATGCATAGCATGA GCGTCGGGGGTAAGCGACGCGTAATTATGCCACAGGGACTGGGATACACC GTCCAAGGTTTAGGGCCTTACCCTGCGGATCCAAGAAAACGGGATGTTCT TGTTCAGGTGGACACATCTTGCCGCCTCGCGGCGCTCTCGTGCGGGTCAG GCAGCACACGGTTCGACCGCCTCCAGAAGTGTCACTCGCACCCGCGACCG CGCATCCGACGTATTTTATCTGCCAAACATGCACCCGAGCATTCAACCCC CACGCTTAAGTAGGCATTCGTCGAACAGCAGTTTTGGTTGTTGGTTCTCG GGTTGTCAGTCATCTTGGTGCACCATATCTGCAATCGCATGTTTTCCCGA AATAGGTACATACTCCGAGTAAGTCTTTGAAACTGGTGAGGTGTGGGTAG AATTTATGTCACTCACCTGTGAGCCCGATGTTGTAAGAGTTCCTAGAAGG CCCAAACACTTCACGTGTAAGAGCGCGCATAGAATATTGACCCCAATCCT AACAACAGAGTAAACCTCCCTCACGCCGCATCTCACGACTCTTTCATCCC CCCGCGTCTTTTCTATGTCGGCATCGATCAAGGTTCTGACTTCCTTCGAA AAAACCACGACCGGAGAACTGGTTATGGACATAGAACTGCTGGAGGCCTT TGACGACGAGGCTGACCAAGGCTACTATGAAGACGCGGCTGTCACGCCGG AGCAACTACAAGACCTCATCCAAGAAACAGGACAGTTTGCGGGAGGAGTG CCTCTTGAAAAGTTCAAGGGTCAAATCGCCTCTCCGATGGAAGACACAAG CAGTGGCTTAAAAAAGAGCGATGGCGGGCTCCCAGGTCAACTGGGCAAGG ATGTATTGGGCGGTTGA
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Coding sequence (CDS) from alignment at C-linearis_contig10:2846187..2849203+

>mRNA_C-linearis_contig10.607.1 ID=mRNA_C-linearis_contig10.607.1|Name=mRNA_C-linearis_contig10.607.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1950bp|location=Sequence derived from alignment at C-linearis_contig10:2846187..2849203+ (Chordaria linearis ClinC8C monoicous)
ATGACGCGACGGGGGCTATCGCGCGTTGTAGCAAGATGCGATTTCGTGTG
CGCATCTCTGTATGCGCTGATATTCCTCAGTCTCGATGCTGTCGGCTTCA
GAGCAGCACCTTGGGTATCCCGGCGAGGCACTCGAAGCAGAGATACATGT
GTCAGGGTGGCCGCGTGGAGAGGCAAGGGGGAACCGAGGGGGAAAGAGCA
AGAAGCCGCCGATAGAATCAGCCTGGCTGCACCCTGCTCACGGAAAGGTC
TACTTCATTCGATGACGCGACGGGGGCTATCGCGCGTTGTAGCAAGATGC
GATTTCGTGTGCGCATCTCTGTATGCGCTGATATTCCTCAGTCTCGATGC
TGTCGGCTTCAGAGCAGCACCTTGGGTATCCCGGCGAGGCACTCGAAGCA
GAGATACATGTGTCAGGGTGGCCGCGTGGAGAGGCAAGGGGGAACCGAGG
GGGAAAGAGCAAGAAGCCGCCGATAGAATCAGCCTGGCTGCACCCTGCTC
ACGGAAAGGTCTACTTCATTCGATGGGGCTCATTGGATCTGCCATCGTGT
GCGGACAAGCGCTAGCTGAACGGACGGAAGCTGCAGACGTGCGGCCGGAA
GAGGTGCCGACGGTTGGAAAAATAACCAAAAGTGGCGTCAAGTACTTCGA
CTACCGCGTCGGGGAAGGGCCGACCCCTAGATGGGGCTCATTGGATCTGC
CATCGTGTGCGGACAAGCGCTAGCTGAACGGACGGAAGCTGCAGACGTGC
GGCCGGAAGAGGTGCCGACGGTTGGAAAAATAACCAAAAGTGGCGTCAAG
TACTTCGACTACCGCGTCGGGGAAGGGCCGACCCCTAGTTGGGGCCAAGA
CTGCATCATCCGGTTTACCATGTACGGACGATCTAGCCCAGACGATAAGT
TGATTAAGATCCAGTCATCCGACAACAACAAGGAGCCTTATCTATTCAAG
CACGGGAATGGTTTCCAGTTGGGGCCAAGACTGCATCATCCGGTTTACCA
TGTACGGACGATCTAGCCCAGACGATAAGTTGATTAAGATCCAGTCATCC
GACAACAACAAGGAGCCTTATCTATTCAAGCACGGGAATGGTTTCCAGAT
CAAGGGAATGGAAGAGGGCATGCATAGCATGAGCGTCGGGGGTAAGCGAC
GCGTAATTATGCCACAGGGACTGGGATACACCGTCCAAGGTTTAGGGCCT
TACCCTGCGGATCCAAGAAAACGGGATGTTCTTGTTCAGATCAAGGGAAT
GGAAGAGGGCATGCATAGCATGAGCGTCGGGGGTAAGCGACGCGTAATTA
TGCCACAGGGACTGGGATACACCGTCCAAGGTTTAGGGCCTTACCCTGCG
GATCCAAGAAAACGGGATGTTCTTGTTCAGGTTCTGACTTCCTTCGAAAA
AACCACGACCGGAGAACTGGTTATGGACATAGAACTGCTGGAGGCCTTTG
ACGACGAGGCTGACCAAGGCTACTATGAAGACGCGGCTGTCACGCCGGAG
CAACTACAAGACCTCATCCAAGAAACAGGACAGTTTGCGGGAGGAGTGCC
TCTTGAAAAGTTCAAGGGTCAAATCGCCTCTCCGATGGAAGACACAAGCA
GTGGCTTAAAAAAGAGCGATGGCGGGCTCCCAGGTCAACTGGGCAAGGAT
GTATTGGGCGGTTGAGTTCTGACTTCCTTCGAAAAAACCACGACCGGAGA
ACTGGTTATGGACATAGAACTGCTGGAGGCCTTTGACGACGAGGCTGACC
AAGGCTACTATGAAGACGCGGCTGTCACGCCGGAGCAACTACAAGACCTC
ATCCAAGAAACAGGACAGTTTGCGGGAGGAGTGCCTCTTGAAAAGTTCAA
GGGTCAAATCGCCTCTCCGATGGAAGACACAAGCAGTGGCTTAAAAAAGA
GCGATGGCGGGCTCCCAGGTCAACTGGGCAAGGATGTATTGGGCGGTTGA
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