prot_C-linearis_contig10.607.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.607.1
Unique Nameprot_C-linearis_contig10.607.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length325
Homology
BLAST of mRNA_C-linearis_contig10.607.1 vs. uniprot
Match: D7G8Q7_ECTSI (Peptidylprolyl isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Q7_ECTSI)

HSP 1 Score: 473 bits (1216), Expect = 1.280e-165
Identity = 236/326 (72.39%), Postives = 273/326 (83.74%), Query Frame = 0
Query:    1 MTRRGLSRVVARCDFVCASLYALIFLSLDAVGFRAAPWVSRRGTRSRDTCVRVAAWRGKGEPRGKEQEAADRISLAAPCSRKGLLHSMGLIGSAIVCGQALAERTEAADVRPEE-VPTVGKITKSGVKYFDYRVGEGPTPSWGQDCIIRFTMYGRSSPDDKLIKIQSSDNNKEPYLFKHGNGFQIKGMEEGMHSMSVGGKRRVIMPQGLGYTVQGLGPYPADPRKRDVLVQVLTSFEKTTTGELVMDIELLEAFDDEADQGYYEDAAVTPEQLQDLIQETGQFAGGVPLEKFKGQIASPMEDT-SSGLKKSDGGLPGQLGKDVLGG 324
            M R  LSRV+ +C   C +L  L+FL L+ +GFRA+PWV    T SR+TCV + A RG GE RG+ +E     +   PCSR  LL SMGL+GSA++ GQAL+ER EAA ++ EE VPTVGKITK+G+KYFD+RVGEGP+P WGQDCIIRFTMYGRS+PD+KLIKIQSSDNNKE YLFKHGNGFQIKGMEEGMHSM VGGKRRVIMPQ +GY+VQGLGPYPADPRKRD+LV+VLTSFEKTTTGELVMDIELL+AFDDEADQGYYED AVTPEQLQD+++ETG+F+GG P+EK  GQ+ASPMEDT SS  KK   GLPGQLGKDV+GG
Sbjct:    1 MARLELSRVIPKC-IACTALVVLMFLDLEVLGFRASPWVRSTATVSRETCVALPAGRGDGEWRGEGREPETGGNTGVPCSRMDLLRSMGLVGSAVIGGQALSERAEAAGMQEEEEVPTVGKITKAGIKYFDFRVGEGPSPRWGQDCIIRFTMYGRSTPDEKLIKIQSSDNNKEKYLFKHGNGFQIKGMEEGMHSMRVGGKRRVIMPQSMGYSVQGLGPYPADPRKRDILVEVLTSFEKTTTGELVMDIELLDAFDDEADQGYYEDTAVTPEQLQDIVRETGRFSGGQPMEKLPGQLASPMEDTTSSAAKKGGAGLPGQLGKDVMGG 325          
BLAST of mRNA_C-linearis_contig10.607.1 vs. uniprot
Match: A0A835YXX3_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXX3_9STRA)

HSP 1 Score: 203 bits (517), Expect = 6.080e-61
Identity = 115/222 (51.80%), Postives = 150/222 (67.57%), Query Frame = 0
Query:   81 RKGLLHSMGLIGS-AIVCGQALAERTEAADVRPEEVPTVGKITKSGVKYFDYRVGEGPTPSWGQDCIIRFTMYGRSSPDDKLIKIQSSDNNKEPYLFKHGNGFQIKGMEEGMHSMSVGGKRRVIMPQGLGYTVQGLGPYPADPRKRDVLVQVLTSFEKTTTGELVMDIELLEAFDDEADQGYYEDAAVTPEQLQDLIQETGQFAGG-VPLEKFKGQIASPME 300
            R+ L  + G++ S AI  G A A+++E       E  TVGKITKSGVKYFD   G G    WG+ C I+FT+YGR + + +L ++ SSDNN EP+LFKHGNG QIKG+EEGMH+M VGGKRR+I+P  LGYTV GLGP+PA    R  L ++L S    T G+LVMD+ELL+AFDDEAD GYY D+++  E++QD+++ T     G   L+   GQ  SP E
Sbjct:   24 RQALATAAGVLASLAIRPGSAQAKQSEY------EAATVGKITKSGVKYFDAAEGSGDKIQWGKMCSIKFTLYGRPAQEGRLQRLDSSDNNGEPFLFKHGNGRQIKGLEEGMHTMRVGGKRRIIIPPTLGYTVSGLGPFPAGALSRMALDKMLDSLG--TNGQLVMDVELLDAFDDEADLGYYTDSSLNLEEMQDVMRVTDLLLDGKAKLQALPGQ--SPTE 235          
BLAST of mRNA_C-linearis_contig10.607.1 vs. uniprot
Match: A0A4D9D9B5_9STRA (Peptidylprolyl isomerase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9B5_9STRA)

HSP 1 Score: 154 bits (389), Expect = 8.220e-42
Identity = 81/177 (45.76%), Postives = 111/177 (62.71%), Query Frame = 0
Query:   99 QALAERTEAADVRPEEVPTVGKITKSGVKYFDYRVGEGPTPSWGQDCIIRFTMYGRSSPDDKLIKIQSSDNNKEPYLFKHGNGFQIKGMEEGMHSMSVGGKRRVIMPQGLGYTVQGLGPYPADPRKRDVLVQVLTSFE-KTTTGELVMDIELLEAFDDEADQGYYEDAAVTPEQLQD 274
            QA A R +  D+     P V   TKSG++Y+D R GEG +P WGQ  II++  Y R+SP  KL+    +   K PYL KHGNG  I+G++EG+HSM +GG RR+++P  LGYT  GLGP P +  +R +LV+ L   E     GE++ D+EL+  +DDEAD GYY+D    P  LQ+
Sbjct:   19 QAAANRVQDMDL-----PPVAFETKSGLRYYDVRKGEGMSPKWGQVAIIQYEGYVRASPFSKLVLFDDTYARKTPYLVKHGNGRVIRGLDEGIHSMKLGGLRRIVVPLELGYTKTGLGPLPPNAFRRKILVRELGKAEVNDPPGEIIYDVELVSLYDDEADLGYYDDLTFDPGYLQE 190          
BLAST of mRNA_C-linearis_contig10.607.1 vs. uniprot
Match: W7TQC7_9STRA (Peptidylprolyl isomerase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQC7_9STRA)

HSP 1 Score: 154 bits (388), Expect = 2.830e-40
Identity = 77/166 (46.39%), Postives = 108/166 (65.06%), Query Frame = 0
Query:  110 VRPEEVPTVGKITKSGVKYFDYRVGEGPTPSWGQDCIIRFTMYGRSSPDDKLIKIQSSDNNKEPYLFKHGNGFQIKGMEEGMHSMSVGGKRRVIMPQGLGYTVQGLGPYPADPRKRDVLVQVLTSFE-KTTTGELVMDIELLEAFDDEADQGYYEDAAVTPEQLQD 274
            V+  ++P V   TKSG++Y+D R GEG +P WGQ  II++  Y R+SP  KL+    +   K PYL KHGNG  I+G++EG+HSM +GG RR+++P  LGYT  GLGP P +  +R +LV+ L   E     GE++ D+EL+  +DDEAD GYY+D    P  LQ+
Sbjct:  152 VQDMDLPAVAFETKSGLRYYDVRKGEGMSPKWGQVAIIQYEGYVRASPFSKLVLFDDTYARKTPYLVKHGNGRVIRGLDEGIHSMKLGGLRRIVVPLELGYTKTGLGPLPPNAFRRKILVRELGKAEVNDPPGEIIYDVELVSLYDDEADLGYYDDLTFDPGYLQE 317          
BLAST of mRNA_C-linearis_contig10.607.1 vs. uniprot
Match: A0A6U3SBH4_9STRA (Peptidylprolyl isomerase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3SBH4_9STRA)

HSP 1 Score: 145 bits (365), Expect = 2.110e-37
Identity = 84/181 (46.41%), Postives = 111/181 (61.33%), Query Frame = 0
Query:  122 TKSGVKYFDYRVGEGPTPSWGQDCIIRFTMYGR---SSPDDKLI--KIQSSDNNKEPYLFKHGNGFQIKGMEEGMHSMSVGGKRRVIMPQGLGYTVQGLGPYPADPRKRDVLVQVLTSFEKTTTGELVMDIELLEAFDDEADQGYYEDAAVTPEQLQDLIQETGQFAGGVPLEKFKGQIAS 297
            TKSG+KY + R G GPTP +GQ C I +  Y +   S   DK I  K+Q  D++   +L KHGNG  + G++EG+H++ VGGKRR+I+P  LG+   GLGP P  P  R  L Q+L    +   G LV D+EL  AFDDEADQGYYED ++TPEQ Q L      F  G   E+ K ++A+
Sbjct:  132 TKSGLKYIELREGTGPTPKYGQLCSISYKAYIKLPDSVSSDKKISTKLQEFDSDNA-FLVKHGNGRILPGLDEGLHTIRVGGKRRIIVPPKLGFVSNGLGPLPETPWGRYKLNQLLNQMVEVKGGNLVFDVELRSAFDDEADQGYYEDRSLTPEQFQTL---RNNFERGAREEREKQKMAA 308          
BLAST of mRNA_C-linearis_contig10.607.1 vs. uniprot
Match: A0A7S2HMU8_9STRA (Peptidylprolyl isomerase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HMU8_9STRA)

HSP 1 Score: 137 bits (346), Expect = 3.380e-35
Identity = 69/174 (39.66%), Postives = 108/174 (62.07%), Query Frame = 0
Query:  114 EVPTVGKITKSGVKYFDYRVGEGPTPSWGQDCIIRFTMYGRSSPDDKLIKIQSS-DNNKEPYLFKHGNGFQIKGMEEGMHSMSVGGKRRVIMPQGLGYTVQGLGPYPADPRKRDVLVQVLTSFEKTTTGELVMDIELLEAFDDEADQGYYEDAAVTPEQLQDLIQETGQFAGGV 286
            E+P+ G  +KSG+KYFDY VG G  P +GQ  I+++    +++  +KL    SS +     Y+ KHGNG  + G++EG+H+M VGGKRR+++P  LGYTV GLGP+P +   R +L ++L   + +  G +  D+ L++A+DD+AD GYY+D  + P  L  +     +F   V
Sbjct:   81 ELPSSGFASKSGMKYFDYEVGPGSPPKYGQVIIVKYIASAKATGKEKLQIFDSSFERGGGDYIMKHGNGRCVLGLDEGIHTMRVGGKRRILVPPNLGYTVPGLGPFPPEAADRRILNKILAKMDDS--GYVAFDVMLIDAYDDDADAGYYDDTDLPPGVLDQVYGNIERFKQAV 252          
BLAST of mRNA_C-linearis_contig10.607.1 vs. uniprot
Match: A0A7S4NDU7_9STRA (Peptidylprolyl isomerase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NDU7_9STRA)

HSP 1 Score: 136 bits (343), Expect = 2.830e-34
Identity = 98/251 (39.04%), Postives = 128/251 (51.00%), Query Frame = 0
Query:   40 SRRGTRSRDTCVRVAAWRGKGEPRGKEQEAADRISLAAPCSRKGLLHSMGLIGSAIVCGQALAERTEAADVRPEEVPTVGKIT----KSGVKYFDYRVGEGPTPSWGQDCIIRFTMYGRSSPDDK--LIKIQSSDNNKEPYLFKHGNGFQIKGMEEGMHSMSVGGKRRVIMPQGLGYTVQGLGPYPADPRKRDVLVQVLTSFEKTTTGELVMDIELLEAFDDEADQGYYEDAAVTPEQLQDLIQETGQFAG 284
            SRR    R   V  AA      PR   Q  AD   +  P    GL  S  L    +V G A             E P  G +T    KSG+KY + R G GPTP +GQ   I +  Y +  PD K    K+   D+++  YL KHGNG  I G++EG+H+M +GGKRR+I+P  LGY   G+GP P  P  R  L  +L    +   G +V D+EL  A DDEADQGYYED +++PE   D +++  Q AG
Sbjct:   60 SRREALLRSASVAAAAAAALSAPR---QALADIEGVVTP---SGLTESGALEVPKVVPGGA------------PEAPAGGGVTLFQTKSGLKYIELREGSGPTPRYGQLVSISYKAYVKL-PDIKGQTQKLDEFDSDRA-YLIKHGNGRTIPGLDEGLHTMKIGGKRRIIIPPKLGYVSPGVGPIPEGPLARRKLNSLLDKMIEVRGGNVVFDVELRSAMDDEADQGYYEDGSLSPEDF-DTLRKNLQQAG 289          
BLAST of mRNA_C-linearis_contig10.607.1 vs. uniprot
Match: A0A7S1U697_9STRA (Peptidylprolyl isomerase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U697_9STRA)

HSP 1 Score: 127 bits (320), Expect = 1.470e-31
Identity = 72/187 (38.50%), Postives = 100/187 (53.48%), Query Frame = 0
Query:  112 PEEVPTVGKITKSGVKYFDYRVGEGPTPSWGQDCIIRFTMYGRSSPDDKLIKIQSSDNNKEPYLFKHGNGFQIKGMEEGMHSMSVGGKRRVIMPQGLGYTVQGLGPYPADPRKRDVLVQVLTSFEKTTTGELVMDIELLEAFDDEADQGYYEDA--AVTPEQLQDLIQETGQFAGGVPLEKFKGQIA 296
            P      G  T+SGVKY++   G GPTP WG   II+FT Y   S +D+ +KI+  + N   Y+FKHGNG Q++G+E+G+HSM +G  RR+I+P  L YT   +GP P        L   L +      G+++ D+ L+  F DEAD+GYY D   AV P               GVP+   KG  +
Sbjct:   70 PSAAGKPGFQTESGVKYYELTEGSGPTPQWGDTTIIKFTQYISRSANDEPVKIEDWNGNN--YVFKHGNGRQLEGLEDGIHSMKIGTTRRIIVPARLAYTTNQVGPLPRSTANLQKLTTELDAM--VNGGQIIFDVTLVNTFRDEADRGYYADETPAVDP--------------NGVPINIIKGSAS 238          
BLAST of mRNA_C-linearis_contig10.607.1 vs. uniprot
Match: A0A2V3IRB8_9FLOR (Peptidylprolyl isomerase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRB8_9FLOR)

HSP 1 Score: 127 bits (318), Expect = 3.700e-31
Identity = 70/174 (40.23%), Postives = 98/174 (56.32%), Query Frame = 0
Query:  106 EAADVRPEEVPTVGKITKSGVKYFDYRVGEGPTPSWGQDCIIRFTMYGRSSPDDKLIKIQSS-DNNKEPYLFKHGNGFQIKGMEEGMHSMSVGGKRRVIMPQGLGYTVQGLGPYPADPRKRDVLVQVLTSFEKTTTGELVMDIELLEAFDDEADQGYYEDAAVTPEQLQDLIQE 278
            E  + R E+ P  G  T SG+K+FD+  GEGPTP WG    I++ +Y  S   D L+K  S+ D  K  YL  HGNG  I G+EE +H+MSVGG+RR I+P  +GY+  G  P P   ++R   +  +   +    G +V DIEL     D  D+GYY D   T E+L  +++E
Sbjct:   64 EIENRRDEDRPLTGFQTISGLKFFDFTRGEGPTPQWGDILNIQYVLYTVSPSGDALVKHDSTYDRGKHGYLIHHGNGEHILGLEEALHTMSVGGRRRAIVPLKIGYSKNGFAPIPPSFQRRKEFIDAINDGD----GTVVFDIELRTIKKDPDDRGYYTDITPTDEELLRIVEE 233          
BLAST of mRNA_C-linearis_contig10.607.1 vs. uniprot
Match: A0A6U1ZUH9_TRICV (Peptidylprolyl isomerase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A6U1ZUH9_TRICV)

HSP 1 Score: 124 bits (310), Expect = 1.330e-30
Identity = 73/174 (41.95%), Postives = 101/174 (58.05%), Query Frame = 0
Query:  105 TEAADVRPEEVPTVGKI-TKSGVKYFDYRVGEGPTPSWGQDCIIRFTMYGRSSPD--DKLIKIQSSDNNKEPYLFKHGNGFQIKGMEEGMHSMSVGGKRRVIMPQGLGYTVQGLGPYPADPRKRDVLVQVLTSFEKTTTGELVMDIELLEAFDDEADQGYYEDAAVTPEQLQDL 275
            T AA+  P +   V    TKSG+KY + R G GPTP +GQ   I +  Y +  PD   K  K++  D+++  YL KHGNG  + G++EG+H+M +GGKRR+I+   LGY   GLGP P  P  R  L  +L    +   G +V D+EL    DDEAD GYY D++++PE    L
Sbjct:   11 TPAANAAPTQEGGVTLFKTKSGLKYIELREGSGPTPRYGQLVSISYKAYVKL-PDIKGKPSKLEEFDSDRG-YLIKHGNGRIVPGLDEGIHTMKLGGKRRIIVSPKLGYVEPGLGPIPEGPLARMRLNNLLDKMVEVRGGNVVFDVELRTVMDDEADLGYYGDSSISPEDFNTL 182          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.607.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8Q7_ECTSI1.280e-16572.39Peptidylprolyl isomerase n=1 Tax=Ectocarpus silicu... [more]
A0A835YXX3_9STRA6.080e-6151.80Peptidylprolyl isomerase n=1 Tax=Tribonema minus T... [more]
A0A4D9D9B5_9STRA8.220e-4245.76Peptidylprolyl isomerase n=1 Tax=Nannochloropsis s... [more]
W7TQC7_9STRA2.830e-4046.39Peptidylprolyl isomerase n=1 Tax=Nannochloropsis g... [more]
A0A6U3SBH4_9STRA2.110e-3746.41Peptidylprolyl isomerase n=1 Tax=Ditylum brightwel... [more]
A0A7S2HMU8_9STRA3.380e-3539.66Peptidylprolyl isomerase n=1 Tax=Dictyocha speculu... [more]
A0A7S4NDU7_9STRA2.830e-3439.04Peptidylprolyl isomerase n=1 Tax=Odontella aurita ... [more]
A0A7S1U697_9STRA1.470e-3138.50Peptidylprolyl isomerase n=1 Tax=Phaeomonas parva ... [more]
A0A2V3IRB8_9FLOR3.700e-3140.23Peptidylprolyl isomerase n=1 Tax=Gracilariopsis ch... [more]
A0A6U1ZUH9_TRICV1.330e-3041.95Peptidylprolyl isomerase n=1 Tax=Trieres chinensis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainPFAMPF00254FKBP_Ccoord: 148..249
e-value: 1.1E-11
score: 44.8
IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainPROSITEPS50059FKBP_PPIASEcoord: 142..253
score: 11.235
NoneNo IPR availableGENE3D3.10.50.40coord: 114..260
e-value: 3.5E-19
score: 70.8
NoneNo IPR availablePANTHERPTHR43811:SF17PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-3, CHLOROPLASTICcoord: 114..225
NoneNo IPR availablePANTHERPTHR43811FAMILY NOT NAMEDcoord: 114..225
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 15..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..324
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 27..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..14
NoneNo IPR availableSUPERFAMILY54534FKBP-likecoord: 110..221

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:2846187..2849203 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.607.1mRNA_C-linearis_contig10.607.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 2846187..2849203 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.607.1 ID=prot_C-linearis_contig10.607.1|Name=mRNA_C-linearis_contig10.607.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=325bp
MTRRGLSRVVARCDFVCASLYALIFLSLDAVGFRAAPWVSRRGTRSRDTC
VRVAAWRGKGEPRGKEQEAADRISLAAPCSRKGLLHSMGLIGSAIVCGQA
LAERTEAADVRPEEVPTVGKITKSGVKYFDYRVGEGPTPSWGQDCIIRFT
MYGRSSPDDKLIKIQSSDNNKEPYLFKHGNGFQIKGMEEGMHSMSVGGKR
RVIMPQGLGYTVQGLGPYPADPRKRDVLVQVLTSFEKTTTGELVMDIELL
EAFDDEADQGYYEDAAVTPEQLQDLIQETGQFAGGVPLEKFKGQIASPME
DTSSGLKKSDGGLPGQLGKDVLGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001179PPIase_FKBP_dom