Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | mitochondrion |
Exons | 1 |
Model size | 667 |
Cds size | 432 |
Stop | 0 |
Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622927325.7776887-UTR-C-linearis_contig10:1875302..1875537 | 1622927325.7776887-UTR-C-linearis_contig10:1875302..1875537 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig10 1875303..1875537 + |
1690879627.6613872-UTR-C-linearis_contig10:1875302..1875537 | 1690879627.6613872-UTR-C-linearis_contig10:1875302..1875537 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig10 1875303..1875537 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622927325.7866733-CDS-C-linearis_contig10:1875537..1875969 | 1622927325.7866733-CDS-C-linearis_contig10:1875537..1875969 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 1875538..1875969 + |
1690879627.6705778-CDS-C-linearis_contig10:1875537..1875969 | 1690879627.6705778-CDS-C-linearis_contig10:1875537..1875969 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 1875538..1875969 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig10.531.1 >prot_C-linearis_contig10.531.1 ID=prot_C-linearis_contig10.531.1|Name=mRNA_C-linearis_contig10.531.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=144bp
MRSNAISRFLGSQATLNFRIHAPKPSTAFPWKIQQPARPTAASQAAAPHH ACGSGTALFASKKNKQKKPQTVTRRTRSCHPDQTTTPSPASNRSNKSSNA FSPDIQSPLSSTSQLQLPARPMVPKPNTVAWVQRETTYPTLDPA back to topmRNA from alignment at C-linearis_contig10:1875303..1875969+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig10.531.1 ID=mRNA_C-linearis_contig10.531.1|Name=mRNA_C-linearis_contig10.531.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=667bp|location=Sequence derived from alignment at C-linearis_contig10:1875303..1875969+ (Chordaria linearis ClinC8C monoicous) AGATGGGTATTTTTATATATTTTTTGTTCATGTGCGATTACCGGCGAGAA
GGGACTGGTCACGTTACAGCCTCACGCGGTTGATGCTTCAGCAGCAGAAC
AACTTCAACAGCACTCTGCTATTGCACACCCCAAGATGAAGCAGTAGCAG
TAACACAATAGCTTTCACCTGCCATTGGCAGGTATATCGGCAGGTGCGGG
CGGATCGTGCACCTAACTCGCAACACGAGAATCGCATGAGAAGTAACGCC
ATTTCGCGGTTTCTTGGTTCCCAGGCAACGTTAAATTTCCGAATACATGC
ACCCAAACCAAGCACTGCTTTTCCATGGAAAATTCAACAACCGGCCCGAC
CCACAGCAGCATCACAAGCAGCAGCACCACATCACGCGTGCGGATCAGGG
ACAGCCTTGTTTGCCAGCAAAAAAAACAAACAAAAAAAGCCACAAACGGT
GACACGACGAACACGATCATGCCATCCCGACCAAACCACGACCCCATCAC
CCGCATCAAACCGAAGTAACAAGAGCTCCAATGCCTTTTCACCCGACATC
CAAAGCCCCCTTTCTTCAACCAGCCAGCTCCAACTTCCCGCAAGACCTAT
GGTCCCGAAACCAAACACGGTGGCCTGGGTACAAAGAGAAACAACGTACC
CCACCCTTGACCCCGCC back to topCoding sequence (CDS) from alignment at C-linearis_contig10:1875303..1875969+ >mRNA_C-linearis_contig10.531.1 ID=mRNA_C-linearis_contig10.531.1|Name=mRNA_C-linearis_contig10.531.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=864bp|location=Sequence derived from alignment at C-linearis_contig10:1875303..1875969+ (Chordaria linearis ClinC8C monoicous) ATGAGAAGTAACGCCATTTCGCGGTTTCTTGGTTCCCAGGCAACGTTAAA TTTCCGAATACATGCACCCAAACCAAGCACTGCTTTTCCATGGAAAATTC AACAACCGGCCCGACCCACAGCAGCATCACAAGCAGCAGCACCACATCAC GCGTGCGGATCAGGGACAGCCTTGTTTGCCAGCAAAAAAAACAAACAAAA AAAGCCACAAACGGTGACACGACGAACACGATCATGCCATCCCGACCAAA CCACGACCCCATCACCCGCATCAAACCGAAGTAACAAGAGCTCCAATGCC TTTTCACCCGACATCCAAAGCCCCCTTTCTTCAACCAGCCAGCTCCAACT TCCCGCAAGACCTATGGTCCCGAAACCAAACACGGTGGCCTGGGTACAAA GAGAAACAACGTACCCCACCCTTGACCCCGCCATGAGAAGTAACGCCATT TCGCGGTTTCTTGGTTCCCAGGCAACGTTAAATTTCCGAATACATGCACC CAAACCAAGCACTGCTTTTCCATGGAAAATTCAACAACCGGCCCGACCCA CAGCAGCATCACAAGCAGCAGCACCACATCACGCGTGCGGATCAGGGACA GCCTTGTTTGCCAGCAAAAAAAACAAACAAAAAAAGCCACAAACGGTGAC ACGACGAACACGATCATGCCATCCCGACCAAACCACGACCCCATCACCCG CATCAAACCGAAGTAACAAGAGCTCCAATGCCTTTTCACCCGACATCCAA AGCCCCCTTTCTTCAACCAGCCAGCTCCAACTTCCCGCAAGACCTATGGT CCCGAAACCAAACACGGTGGCCTGGGTACAAAGAGAAACAACGTACCCCA CCCTTGACCCCGCC back to top
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