Homology
BLAST of mRNA_C-linearis_contig10.518.1 vs. uniprot
Match:
D7FZW6_ECTSI (Complex I intermediate-associated protein 30, mitochondrial (NADH dehydrogenase [ubiquinon) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW6_ECTSI)
HSP 1 Score: 455 bits (1170), Expect = 2.820e-156
Identity = 224/300 (74.67%), Postives = 250/300 (83.33%), Query Frame = 3
Query: 57 MARIVRTYRKYWPTDAILKGKVVLEDLMLCSFSSKELTEGWAVTTDQRWGGKSTATVSWKPWERLTGADPTASATRGGDPSSDAGAG---ALDAQPWELYEGSPDTAAPRGVLQSEGMSTGDEEEAGPPLDKGGFLCFSGELSTEKAARARVGGFCGTRSTRREQPLVLPDGYKGMEMRIRTDGRQYEVNFEPYSGILNDLYQGYVRTPPGQWSTVTLPLNRLLLTGQGQIRDVQRKWDKGMELRSVGFTIADGVIGPFRLDVAWVSLVPEVEDGXXXXXXXXXXXXXXPSPPENGVMSW 947
MAR+ RTYRKYWPTDA+LKG VLEDLMLCSFS+K+L GW VTTDQ WGGKSTATVSWKPWERL G D +ASAT ++DA AG ALD QPW L+EG+P TAAPRGVLQSEG+ GDEE PPL+KGGF CFSGELSTE+AARA+VGGFCGTRSTRR++PLVLPDGY+G+EMRIRTDGRQYEVNFEP SGI+NDLYQGYVRTP GQW+TV+LPLNRLLLTGQGQIRD+QRKWD GMEL+S+GFTIADGV GPFRLDVAWV+LV EV+D P PP +GVMSW
Sbjct: 1 MARVARTYRKYWPTDAVLKGTAVLEDLMLCSFSTKDLLAGWDVTTDQSWGGKSTATVSWKPWERLGGTDGSASAT-----AADAAAGGACALDVQPWRLFEGTPATAAPRGVLQSEGLPAGDEENTAPPLEKGGFFCFSGELSTERAARAKVGGFCGTRSTRRQEPLVLPDGYRGVEMRIRTDGRQYEVNFEPQSGIINDLYQGYVRTPAGQWATVSLPLNRLLLTGQGQIRDIQRKWDVGMELKSIGFTIADGVGGPFRLDVAWVALVSEVDD---EGKDDGDAPRKKPLPPTDGVMSW 292
BLAST of mRNA_C-linearis_contig10.518.1 vs. uniprot
Match:
A0A6H5KSW2_9PHAE (CIA30 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSW2_9PHAE)
HSP 1 Score: 174 bits (440), Expect = 7.930e-49
Identity = 83/115 (72.17%), Postives = 94/115 (81.74%), Query Frame = 3
Query: 603 QYEVNFEPYSGILNDLYQGYVRTPPGQWSTVTLPLNRLLLTGQGQIRDVQRKWDKGMELRSVGFTIADGVIGPFRLDVAWVSLVPEVEDGXXXXXXXXXXXXXXPSPPENGVMSW 947
+YEVNFEP SGI+NDLYQGYVRTP GQW+TV+LPLNRLLLTGQGQIRD+QRKWD GMEL S+GFTIADGV GPFRLDVAWV+LV EV++G P PP++GVMSW
Sbjct: 29 RYEVNFEPQSGIINDLYQGYVRTPAGQWATVSLPLNRLLLTGQGQIRDIQRKWDMGMELNSIGFTIADGVGGPFRLDVAWVALVSEVDEGKDDGDAPRKK----PLPPKDGVMSW 139
BLAST of mRNA_C-linearis_contig10.518.1 vs. uniprot
Match:
W7U321_9STRA (NADH:ubiquinone oxidoreductase intermediate-associated protein 30 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U321_9STRA)
HSP 1 Score: 97.4 bits (241), Expect = 3.980e-19
Identity = 55/141 (39.01%), Postives = 80/141 (56.74%), Query Frame = 3
Query: 459 FSGELSTEKAAR---ARVGGFCGTRSTRREQPLVLP-DGYKGMEMRIRTDGRQYEVNFEPYSGILNDLYQGYVR-TPPGQWSTVTLPLNRLLLTGQGQIRDVQRKWDKGMELRSVGFTIADGVIGPFRLDVAWVSLVPEVE 866
FSG LS + A + G+C + E P +GY+G+E+ +RTDGR Y N E S ++LYQGY+ P GQW T+ LP + LT G++ +Q++ D L S+GF IADG GPF L++A V+ V ++
Sbjct: 87 FSGNLSNMRPAADPTVKRTGYCALKV---EMPRSFRVEGYEGLELTVRTDGRSYITNLEVESFFPDELYQGYITGLPGGQWLTIQLPFQDMTLTRLGRMSYIQKELDSTFTLESIGFLIADGKTGPFCLEIANVAAVGRIQ 224
BLAST of mRNA_C-linearis_contig10.518.1 vs. uniprot
Match:
A0A1V9YVR5_9STRA (Queuine tRNA-ribosyltransferase catalytic subunit 1 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YVR5_9STRA)
HSP 1 Score: 82.0 bits (201), Expect = 8.550e-13
Identity = 62/245 (25.31%), Postives = 98/245 (40.00%), Query Frame = 3
Query: 141 LCSFSSKELTEGWAVTTDQRWGGKSTATVSWKPWERLTGADPTASATRGGDPSSDAGAGALDAQPWELYEGSPDTAAPRGVLQSEGMSTGDEEEAGPPLDKGGFLCFSGELSTEKAARARV---GGFCGTRSTRREQPLVLPDGYKGMEMRIRTDGRQYEVNFEPYSGILNDLYQGYVRTPPGQWSTVTLPLNRLLLTGQGQIRDVQRKWDKGMELRSVGFTIADGVIGPFRLDVAWVSLVPEVE 866
L F+S + T+ W V++DQ GG ST + + P E + D+++A + G FSG LS + G+C R Q L L GYKG+ MRI+TDGR Y +N + S +DLY G+++ P +W L + +LT +G ++ LR++G +AD GPF + + W+ + V+
Sbjct: 452 LFQFASAQATQEWLVSSDQAIGGSSTCSFEFVPHEEMK----------------------------------------------------DDKDA----PQAGAAVFSGNLSLSIQPTEQYVVRSGYCAIRGNV-PQNLHL-HGYKGLAMRIKTDGRTYRINAQADSWNPHDLYMGFLKAPANEWVEAELAFSDFILTSRGYVQMNDPTKLNPASLRTIGIALADDNEGPFSMAIEWIKAIENVD 638
BLAST of mRNA_C-linearis_contig10.518.1 vs. uniprot
Match:
A0A5A8C5V0_CAFRO (CIA30 domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C5V0_CAFRO)
HSP 1 Score: 77.0 bits (188), Expect = 4.070e-12
Identity = 46/141 (32.62%), Postives = 72/141 (51.06%), Query Frame = 3
Query: 459 FSGELSTEKAARARVGGFCGTRSTRREQPLVLPD----GYKGMEMRIRTDGRQYEVNFEPYSGILNDLYQGYVRTPPGQWSTVTLPLNRLLLTGQGQIRDVQRKWDKGMELRSVGFTIADGVIGPFRLDVAWVSLVPEVED 869
F G + R GGFC R R +P+ D +G+++R++TDGR + +NF+ D++Q VRT P +W T+ LP + +G +R+VQ + ++ G T+ADG GPFR +V V + E D
Sbjct: 63 FEGVVDWTSEDRESRGGFCNVR-LRERKPVREDDEEMMATEGVQLRVKTDGRPFLLNFQCRDTTDEDVWQAEVRTAPFRWETLALPWSGFAHVSRGLVREVQMNLEPH-KIDGFGLTVADGRNGPFRCEVQHVVALGEWRD 201
BLAST of mRNA_C-linearis_contig10.518.1 vs. uniprot
Match:
A0A5A8E3B7_CAFRO (CIA30 domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E3B7_CAFRO)
HSP 1 Score: 77.0 bits (188), Expect = 1.160e-11
Identity = 46/141 (32.62%), Postives = 72/141 (51.06%), Query Frame = 3
Query: 459 FSGELSTEKAARARVGGFCGTRSTRREQPLVLPD----GYKGMEMRIRTDGRQYEVNFEPYSGILNDLYQGYVRTPPGQWSTVTLPLNRLLLTGQGQIRDVQRKWDKGMELRSVGFTIADGVIGPFRLDVAWVSLVPEVED 869
F G + R GGFC R R +P+ D +G+++R++TDGR + +NF+ D++Q VRT P +W T+ LP + +G +R+VQ + ++ G T+ADG GPFR +V V + E D
Sbjct: 92 FEGVVDWTSEDRESRGGFCNVR-LRERKPVREDDEEMMATEGVQLRVKTDGRPFLLNFQCRDTTDEDVWQAEVRTAPFRWETLALPWSGFAHVSRGLVREVQMNLEPH-KIDGFGLTVADGRNGPFRCEVQHVVALGEWRD 230
BLAST of mRNA_C-linearis_contig10.518.1 vs. uniprot
Match:
L7MD23_RHIPC (CIA30 domain-containing protein (Fragment) n=1 Tax=Rhipicephalus pulchellus TaxID=72859 RepID=L7MD23_RHIPC)
HSP 1 Score: 74.3 bits (181), Expect = 7.910e-11
Identity = 48/141 (34.04%), Postives = 74/141 (52.48%), Query Frame = 3
Query: 459 FSGELSTE--KAARARVGGFCGTRSTRREQPLVLPDGYKG-----MEMRIRTDGRQYEVNF--EPYSGIL-NDLYQGYVRTPPGQ-WSTVTLPLNRLLLTGQGQIRDVQRKWDKGMELRSVGFTIADGVIGPFRLDVAWVS 848
FSG L T K + G+C RS R +P +P Y +E+RIR DGR Y +N + Y + N LYQ + T G W +P ++ L+ +G+++D Q D ++ +G T+ADG+ GPFRL+V ++
Sbjct: 171 FSGYLDTTVPKDGKMVETGYCNMRSPRARRPFNMPAAYDWSSFTHLELRIRGDGRSYLINLGADQYFDVTWNVLYQFPLYTRGGPYWQVARIPFSKFLVGNKGRVQDKQGAIDL-TNVKHMGITLADGIAGPFRLEVDYIG 310
BLAST of mRNA_C-linearis_contig10.518.1 vs. uniprot
Match:
L7MEY0_RHIPC (CIA30 domain-containing protein (Fragment) n=1 Tax=Rhipicephalus pulchellus TaxID=72859 RepID=L7MEY0_RHIPC)
HSP 1 Score: 74.3 bits (181), Expect = 1.010e-10
Identity = 48/141 (34.04%), Postives = 74/141 (52.48%), Query Frame = 3
Query: 459 FSGELSTE--KAARARVGGFCGTRSTRREQPLVLPDGYKG-----MEMRIRTDGRQYEVNF--EPYSGIL-NDLYQGYVRTPPGQ-WSTVTLPLNRLLLTGQGQIRDVQRKWDKGMELRSVGFTIADGVIGPFRLDVAWVS 848
FSG L T K + G+C RS R +P +P Y +E+RIR DGR Y +N + Y + N LYQ + T G W +P ++ L+ +G+++D Q D ++ +G T+ADG+ GPFRL+V ++
Sbjct: 202 FSGYLDTTVPKDGKMVETGYCNMRSPRARRPFNMPAAYDWSSFTHLELRIRGDGRSYLINLGADQYFDVTWNVLYQFPLYTRGGPYWQVARIPFSKFLVGNKGRVQDKQGAIDL-TNVKHMGITLADGIAGPFRLEVDYIG 341
BLAST of mRNA_C-linearis_contig10.518.1 vs. uniprot
Match:
A0A6M2CVE3_RHIMP (Putative complex i intermediate-associated protein 30 mitochondrial ovary overexpressed n=2 Tax=Rhipicephalus TaxID=34630 RepID=A0A6M2CVE3_RHIMP)
HSP 1 Score: 73.2 bits (178), Expect = 1.250e-10
Identity = 47/141 (33.33%), Postives = 73/141 (51.77%), Query Frame = 3
Query: 459 FSGELSTEKAARARV--GGFCGTRSTRREQPLVLPDGYKG-----MEMRIRTDGRQYEVNF--EPYSGIL-NDLYQGYVRTPPGQ-WSTVTLPLNRLLLTGQGQIRDVQRKWDKGMELRSVGFTIADGVIGPFRLDVAWVS 848
FSG L T +V G+C RS R +P +P Y +E+R+R DGR Y +N + Y + N LY + T G W +P ++ L+ +G+I+D Q D ++ +G T+ADG+ GPFRL+V ++
Sbjct: 127 FSGYLDTTVPKDGKVVETGYCNVRSPRARRPFNMPAAYDWTPFTHLELRVRGDGRSYMINLGADHYFDVTWNVLYHFPLYTRGGPYWQVTRIPFSKFLVGNKGRIQDKQGAIDLS-NVKHMGITLADGISGPFRLEVDYIG 266
BLAST of mRNA_C-linearis_contig10.518.1 vs. uniprot
Match:
A0A0D2UCD6_CAPO3 (CIA30 domain-containing protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2UCD6_CAPO3)
HSP 1 Score: 71.6 bits (174), Expect = 2.360e-10
Identity = 46/140 (32.86%), Postives = 75/140 (53.57%), Query Frame = 3
Query: 459 FSGELSTEKAARARV--GGFCGTRSTRREQPLVLP-----DGYKGMEMRIRTDGRQYEVNFEPYSGILNDLYQGYVRTPPG-QWSTVTLPLNRLLLTGQGQIRDVQRKWDKGMELRSVGFTIADGVIGPFRLDVAWVSLV 854
F G LS K +++ GF RS R + + P + + +E+ +R DGR Y N S +D+YQ +V T G +W + LP R LLT G +++ Q ++K +R+ GF++ADGV GPF L++ + ++
Sbjct: 75 FDGVLSQAKPQGSKLVRSGFAAIRSKRYPRTPLAPYTMNLEAFDTVELILRGDGRTYISNLSTDSVQEHDVYQSFVYTRGGPEWERILLPFARYLLTYHGYVQEDQPVFNK-RAIRTFGFSLADGVEGPFALEIKSIRVL 213
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.518.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 2.82e-156 / Id = 74.67 Expect = 7.93e-49 / Id = 72.17 Expect = 3.98e-19 / Id = 39.01 Expect = 8.55e-13 / Id = 25.31 Expect = 4.07e-12 / Id = 32.62 Expect = 1.16e-11 / Id = 32.62 Expect = 7.91e-11 / Id = 34.04 Expect = 1.01e-10 / Id = 34.04 Expect = 1.25e-10 / Id = 33.33 Expect = 2.36e-10 / Id = 32.86 Sequence D7FZW6_ECTSI A0A6H5KSW2_9PHAE W7U321_9STRA A0A1V9YVR5_9STRA A0A5A8C5V0_CAFRO A0A5A8E3B7_CAFRO L7MD23_RHIPC L7MEY0_RHIPC A0A6M2CVE3_RHIMP A0A0D2UCD6_CAPO3 Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 460.3 Seed ortholog evalue 6.8e-127 Seed eggNOG ortholog 2880.D7FZW6 Preferred name NDUFAF1 KEGG ko ko:K18159 KEGG Pathway ko04714,map04714 Hectar predicted targeting category other localisation GOs GO:0001666,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005746,GO:0005747,GO:0005829,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006996,GO:0007005,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009266,GO:0009408,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0010257,GO:0015980,GO:0016020,GO:0016043,GO:0016310,GO:0017144,GO:0019637,GO:0019693,GO:0019866,GO:0022607,GO:0022900,GO:0022904,GO:0030964,GO:0031090,GO:0031667,GO:0031966,GO:0031967,GO:0031975,GO:0032981,GO:0032991,GO:0033108,GO:0034622,GO:0034641,GO:0036293,GO:0036296,GO:0042594,GO:0042773,GO:0042775,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045271,GO:0045333,GO:0046034,GO:0046483,GO:0050896,GO:0051082,GO:0055086,GO:0055093,GO:0055114,GO:0065003,GO:0070469,GO:0070482,GO:0071704,GO:0071840,GO:0072521,GO:0098796,GO:0098798,GO:0098800,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1990204 EggNOG free text desc. mitochondrial respiratory chain complex I assembly EggNOG OGs KOG2435@1,KOG2435@2759 Ec32 ortholog description Complex I intermediate-associated protein 30, mitochondrial precursor (NADH dehydrogenase [ubiquinon]) Ec32 ortholog Ec-22_003820.1 COG Functional cat. S Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko03029 Exons 6 Model size 1512 Cds size 894 Stop 1 Start 1
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622927337.251963-UTR-C-linearis_contig10:1695633..1695689 1622927337.251963-UTR-C-linearis_contig10:1695633..1695689 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig10 1695634..1695689 + 1690879634.948924-UTR-C-linearis_contig10:1695633..1695689 1690879634.948924-UTR-C-linearis_contig10:1695633..1695689 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig10 1695634..1695689 + 1622927337.335298-UTR-C-linearis_contig10:1699254..1699816 1622927337.335298-UTR-C-linearis_contig10:1699254..1699816 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig10 1699255..1699816 + 1690879635.0214522-UTR-C-linearis_contig10:1699254..1699816 1690879635.0214522-UTR-C-linearis_contig10:1699254..1699816 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig10 1699255..1699816 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622927337.2643435-CDS-C-linearis_contig10:1695689..1695844 1622927337.2643435-CDS-C-linearis_contig10:1695689..1695844 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 1695690..1695844 + 1690879634.962269-CDS-C-linearis_contig10:1695689..1695844 1690879634.962269-CDS-C-linearis_contig10:1695689..1695844 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 1695690..1695844 + 1622927337.275758-CDS-C-linearis_contig10:1696498..1696652 1622927337.275758-CDS-C-linearis_contig10:1696498..1696652 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 1696499..1696652 + 1690879634.9734762-CDS-C-linearis_contig10:1696498..1696652 1690879634.9734762-CDS-C-linearis_contig10:1696498..1696652 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 1696499..1696652 + 1622927337.2866578-CDS-C-linearis_contig10:1697016..1697145 1622927337.2866578-CDS-C-linearis_contig10:1697016..1697145 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 1697017..1697145 + 1690879634.9819572-CDS-C-linearis_contig10:1697016..1697145 1690879634.9819572-CDS-C-linearis_contig10:1697016..1697145 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 1697017..1697145 + 1622927337.2973456-CDS-C-linearis_contig10:1697760..1697870 1622927337.2973456-CDS-C-linearis_contig10:1697760..1697870 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 1697761..1697870 + 1690879634.9902875-CDS-C-linearis_contig10:1697760..1697870 1690879634.9902875-CDS-C-linearis_contig10:1697760..1697870 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 1697761..1697870 + 1622927337.3086004-CDS-C-linearis_contig10:1698397..1698653 1622927337.3086004-CDS-C-linearis_contig10:1698397..1698653 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 1698398..1698653 + 1690879634.9984522-CDS-C-linearis_contig10:1698397..1698653 1690879634.9984522-CDS-C-linearis_contig10:1698397..1698653 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 1698398..1698653 + 1622927337.3233964-CDS-C-linearis_contig10:1699164..1699254 1622927337.3233964-CDS-C-linearis_contig10:1699164..1699254 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 1699165..1699254 + 1690879635.007325-CDS-C-linearis_contig10:1699164..1699254 1690879635.007325-CDS-C-linearis_contig10:1699164..1699254 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 1699165..1699254 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig10.518.1
>prot_C-linearis_contig10.518.1 ID=prot_C-linearis_contig10.518.1|Name=mRNA_C-linearis_contig10.518.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=298bp
MARIVRTYRKYWPTDAILKGKVVLEDLMLCSFSSKELTEGWAVTTDQRWG back to top mRNA from alignment at C-linearis_contig10:1695634..1699816+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig10.518.1 ID=mRNA_C-linearis_contig10.518.1|Name=mRNA_C-linearis_contig10.518.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4183bp|location=Sequence derived from alignment at C-linearis_contig10:1695634..1699816+ (Chordaria linearis ClinC8C monoicous)CACACTCTCTTGGCTGTATTCCACAGCTCTGACTCACAGCCGGCGTGCAA
GCAAAC ATGGCGAGGATAGTGCGAACGTACAGGAAGTATTGGCCCACGGA
CGCCATCCTGAAGGGCAAGGTGGTGCTGGAGGACCTGATGCTGTGCTCCT
TCTCGTCCAAGGAGCTGACGGAAGGGTGGGCTGTCACGACAGACCAGCGC
TGGGGCGGGAA GTGAGTGTGTGCATGCGTGTTCGTTGGTGCCGTCGATGT
CCATAACAAAGAAAGCCGCAGCACCTGCGACACACAAGCCGGGAAAGGCC
TCAGTGAAGTATATGGCTGATAGGGGATGGTCGGCTGTTGTAGGCTACCC
CCAAGCGACCAGCTCTGCAGGGGCAAACCCCTTGCAGAAGCAGGTTCGCT
CTCGGCTTACGTACAGCCGACGACCGTCGAGACGGACCAGTACCGGAAGA
GTCGCGAGCAAAGCTTACCTTGGCACACCCACGAAAGCTGTCGTTCCACA
AATCTTTTGCTTGTCACCGGTGCATTTTGTTTGTGAGGGAGAGAGAGCAA
CTTTTGCGCGACGAATGCAGGGATACCGATACGCTCGCTCGCGCCCGCCC
GTGGCGCTGGCTGCTGTCTGCTGCGGTTGGTCAGCGGCGGGACACAGGCG
CACCGCAAAGTAGCTCCCAACCGTCTTCTCCCTCGACCGTAAGGGTGGCC
CATGCCGTGCAACGCCGTGCCCGCACAGGTTACTGTCCGAAGTTCTGACT
TGCTCTCCCTGCCTGTCTGTCGGTCTGCCTGCCTGCCTGCCTGTCTGTCT
GTCGGTCTGTCTGTCTTATCTCTTCTCTGTCTGTCGCTCTGTCTGTCTCT
CTGTGCCGATACTAGATCTACCGCCACAGTTTCGTGGAAACCTTGGGAAC
GGCTTACCGGCGCTGACCCAACAGCTTCTGCCACTCGTGGTGGTGATCCC
AGCAGCGACGCTGGTGCTGGTGCGCTGGACGCGCAGCCGTGGGAGCTGTA
CGAGGGATCGCCTGACACG GTACGAGTTCCGCAGGGTTTTCGCCTCTTGT
ATTCTTGTGTATTCTGGTATGCTTTTATTATCATGCTGGCGCCCGCTGCC
CGAATAGCTGTTGGGGGCGCTGGTATGGCTGGTGCCTACATACGTTCCGT
GCAAGGTTATCTCCCACACGCCGCCTTGCTTTGATTCGCCAGGTGTTGCG
GGCAATGCATTCATTTCTCACGCCGTCTGTATCGAGCATCGCCCCGATTT
CTTAACGTTCTTCATGTATCAGGAGTTTCCCTCTCTCTGAATAAGCCAAG
CAAGGATAAATGTCACGCAATTTGATACTGCATGTCCTCTGAGCATGTGT
GTGTCCCCATTGCCCGTTTCTCTCTTTTTGCAGGCGGCTCCGCGAGGCGT
GCTACAGTCGGAGGGTATGTCAACAGGCGACGAGGAGGAAGCAGGGCCCC
CTCTGGACAAGGGGGGATTCCTGTGTTTTTCTGGGGAGCTTAGCACGGAG
AAGGCGGCCAGG GTGAGGGAGAGATCTGGTGTGATTAAACGGGACCGTTG
TGGGTGTTTTTTACAAATCAAAACAGCATCAAAGAATTAACCTCCCCTCA
ACGAGACGAATCCCTTAGAGGTGGATTAGCTAGCAGTTCAAAACAGTAGT
GACGTAATATGGGATGGACGGAGAATAAAAACACCTAAAACTGGGAACAC
GTCATAAACCTCTCCTGCAGCGCTCTGTGGATGCTTTTGGTTTGCTCGTT
TGTTGTCGCCGTTGGACGGCAGGGGTGTTCGCACATACCTCGGTTCTTGA
TGCTAGCTGTCCTCCCGAAGGAGTGTCAGCGTCGCCTCTCAGCTCGAACA
GGCACAGGTTGAATTACAGCATCTGTTCGGTGACAAGTGTGTCGCCGCGG
CCATGCGTGCTGCCTGTCCTCGAAAGCAACCCCATATCTCAACGATGCTG
AGGTTCGTTGTACAAGTCACTGCTGTGATGTTTGTTGTACATATGTACGC
GGTGTTGCTTGTATCGTTTACCGAGGTTCCTTCCCAAAGAGAACTCTGTT
TCCTCTTCTTGCTTTTTTTTCTGTTTTTCCTGGTATGTCTACCTCGTCGA
TCGCTTTCTTGGCCGTTCGGCCTCTAGGCTAGGGTGGGCGGCTTCTGCGG
AACTAGATCCACTCGACGTGAGCAGCCTCTCGTCCTGCCGGATGGTTACA
AGGGTATGGAGATGCGAATAAGGACCGACGGCCGACA GTGAGTTTCGTTG
TTTGTTGTTTGTTGTTGTTGTTGTTGTCGCCGAACTGTACTCTCACCCAA
ACCAGACTTGGTTCACGAAGATCGAAAAAGCCGTCGCCACGCGTCGTTGT
TTCATGCCCCCCAGCCCGAAAGCGTGACAGAACCAGAACAAGAAAACTGT
ATCGAAACAGCAGCACTAGACTCTGAGCACGAGCCACTAGGCATTCGCCG
CAAATGGCCGGGTTATAAAACATACCGGATCAAGCAAGCGCTACCAAATG
CTGCCCGGGGCAACTCCCACGCGACGAAACCGCTCAACTGTACCTTGTAC
AAGTGCGTCGAAGCTTTTAAAAACCCATCACAAGAGGGCAAGAACCTGCT
GCTGCAAGAGAGATAAATACGCGACTCGCTCTGTCCGCCTGCAGGACGAC
AAAGGCTCTCATATGTATGTGCTTTACCCTGATTTTATTTTGATCCTTGA
AACCGCACTGGTACTAGATCACCCCCCGCCCCCGCGCACCCTCCCCTGGC
TTTGCCGTGCCCAGGTACGAGGTCAACTTCGAGCCATACTCGGGCATCCT
GAACGACCTCTACCAGGGCTACGTCCGAACCCCGCCCGGCCAGTGGTCGA
CCGTTACCCTGCCCCTCAACCGGCTGCTTCTCACGGGGCAGGGGCAGATC
CGCGACGTCCAGAGGAAGTGGGACAAGGGGATGGAGCTGCGATCGGTCGG
TTTCACGATCGCGGACGGGGTCATAGGCCCGTTCCGGCTGGATGTGGCGT
GGGTGTCGCTCGTGCCAGAG GCAAGGGGGAAGAGTAAGGGGTGATGGGTG
GGCTCATTTTGGTTATGAGAGGAGTCAGGGTCAGCTGCTGCCTTGCTTTG
GTGGTTTGACTGATCATACATATGACCATGACCTGGTCGAGAGGCAGGGC
CGAGGAGGTGGAGGCTTGGCCTTTTGAAGTCTGTTTGGTGTCTTTGCCCC
CTTAATACCATCACCGCCTTGTGTTCTGTTATGTGTGTATCGTGTGTTAT
GTGTCGATTCCTCTCCTTTCTCTGTTTCGCCTTTTGCTGCATCTGGTGGT
AGCCGTCAGGTGGTTTGACCTTTGAACGCGCACCCGCCGAGAGAACGCAT
GGCACAGGAGGCCTGCCCCTCCCATCTCTTCGACGATTTACTTGCCGTTT
ACCGTTTGCCGTTTGCCGTTTGCCGTTTGTTCCGTCTCGTGTCTCCGTCG
TAGATACGTCGTTCCCTCTTGATATCTAAAATCTGCTTCATTGTTTTCCG
TTGTTCTGCTGAACGTCATCGTTGGTTTCAGGTGGAAGATGGCGACGGCA
CGGGCAACGGCAGCGGGGACGCGAAAAGAAAAAAGCCTTCTCCTCCGGAG
AACGGTGTCATGTCATGGTAG ATTGAGCCCACGATCTCTCTGGGGATAGT
CTAGACCTCTAGGAAATTAGGTTGTCTAAAGTCGCGCCGTTTTGATTGGT
TGGGATCGAAAACTGGGTTTGGTCGTTGTCTCTCCACAAGTATTGGAGGG
ATACCAAACATCCTGCACCGGGTACAACTCTCGCTTTGCAGAAGGCGCTT
TGTTGATTTTGTTCGCCAAAGAACGGATGCCGTGGTAGGCTACAAATTCG
TTTTGCAGTTTTCTGCGTAATCGAAGACCGAACTTCACGTTTCGTTCAAT
ACACAATCCCGAAACTCTTGTGGATACTTCGTAGAAGTATAAGGTCACCA
CCCCGAAACCATCTGGCCGTACGTGTAAGGAGGACAAGAGGAAGGCGTAG
ACGACCCGAACCTCCTTTGGGCGTGCTACCTTGATCGAATTTTGTCAGGT
ACAGACGATAGAGCTATTTCAGGCTGGTGGTACAGGCTCGGTAGAGAGTG
CCGAACGGCATGGCCTCGACAATACAATGCCCATGCAACACAAGGCTGTG
GCGGCCAAAATCAACAAGCCAAGGGAAGTCGTG back to top Coding sequence (CDS) from alignment at C-linearis_contig10:1695634..1699816+
>mRNA_C-linearis_contig10.518.1 ID=mRNA_C-linearis_contig10.518.1|Name=mRNA_C-linearis_contig10.518.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1788bp|location=Sequence derived from alignment at C-linearis_contig10:1695634..1699816+ (Chordaria linearis ClinC8C monoicous) back to top