Homology
BLAST of mRNA_C-linearis_contig10.515.1 vs. uniprot
Match:
D7FZW9_ECTSI (Vacuolar protein sorting-associated protein 29 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZW9_ECTSI)
HSP 1 Score: 240 bits (612), Expect = 7.580e-74
Identity = 114/117 (97.44%), Postives = 116/117 (99.15%), Query Frame = 2
Query: 188 MAGDFGELVLVLGDMHIPHREAAIPEKFKKMLVPNKMQHVLCTGNLVGKDQYNDLRTLAPNVHVVRGDFEESTSFPESKVVQIGQFRVGLTHGHQIVPWGDPNALAMAQRQLGADIL 538
MAGDFGELVLVLGDMHIPHREAAIPEKFKKMLVPNKMQHVLCTGNLVGKDQYNDLRTLAPNVHVVRGDFEEST+FPE+KVVQIGQFRVGLTHGHQIVPWGDPNALAM QRQLGADIL
Sbjct: 1 MAGDFGELVLVLGDMHIPHREAAIPEKFKKMLVPNKMQHVLCTGNLVGKDQYNDLRTLAPNVHVVRGDFEESTTFPETKVVQIGQFRVGLTHGHQIVPWGDPNALAMTQRQLGADIL 117
BLAST of mRNA_C-linearis_contig10.515.1 vs. uniprot
Match:
A0A7S2FLA0_9STRA (Vacuolar protein sorting-associated protein 29 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FLA0_9STRA)
HSP 1 Score: 196 bits (497), Expect = 1.720e-56
Identity = 89/114 (78.07%), Postives = 101/114 (88.60%), Query Frame = 2
Query: 197 DFGELVLVLGDMHIPHREAAIPEKFKKMLVPNKMQHVLCTGNLVGKDQYNDLRTLAPNVHVVRGDFEESTSFPESKVVQIGQFRVGLTHGHQIVPWGDPNALAMAQRQLGADIL 538
DFGELVLV+GD HIPHR A IPEKFK+MLVPNKMQHVLCTGNLV K+QY++ R LAPN+H+VRGDF+ES+SFPE+KVVQIG F++GL HGHQIVPWGDP ALA QRQL DIL
Sbjct: 22 DFGELVLVVGDCHIPHRAAMIPEKFKRMLVPNKMQHVLCTGNLVTKEQYDEFRNLAPNMHIVRGDFDESSSFPETKVVQIGNFKIGLAHGHQIVPWGDPLALAAVQRQLDVDIL 135
BLAST of mRNA_C-linearis_contig10.515.1 vs. uniprot
Match:
A0A7S2BTX2_9STRA (Vacuolar protein sorting-associated protein 29 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BTX2_9STRA)
HSP 1 Score: 192 bits (489), Expect = 1.530e-55
Identity = 86/118 (72.88%), Postives = 104/118 (88.14%), Query Frame = 2
Query: 188 MAG-DFGELVLVLGDMHIPHREAAIPEKFKKMLVPNKMQHVLCTGNLVGKDQYNDLRTLAPNVHVVRGDFEESTSFPESKVVQIGQFRVGLTHGHQIVPWGDPNALAMAQRQLGADIL 538
MAG DFGEL LV+GD HIPHR A IPEKFK+MLVPNKMQHVLCTGNLV K+Q+++ R+LAPN+H+VRGDF+E ++FPE+KVVQIGQF++GL HGHQ+VPWGDP ALA QR++ DIL
Sbjct: 1 MAGSDFGELALVIGDCHIPHRAAGIPEKFKRMLVPNKMQHVLCTGNLVSKEQFDEFRSLAPNMHIVRGDFDEQSNFPETKVVQIGQFKIGLVHGHQVVPWGDPLALAQVQREMDVDIL 118
BLAST of mRNA_C-linearis_contig10.515.1 vs. uniprot
Match:
W4GLS4_9STRA (Vacuolar protein sorting-associated protein 29 n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GLS4_9STRA)
HSP 1 Score: 191 bits (484), Expect = 1.580e-54
Identity = 86/114 (75.44%), Postives = 100/114 (87.72%), Query Frame = 2
Query: 197 DFGELVLVLGDMHIPHREAAIPEKFKKMLVPNKMQHVLCTGNLVGKDQYNDLRTLAPNVHVVRGDFEESTSFPESKVVQIGQFRVGLTHGHQIVPWGDPNALAMAQRQLGADIL 538
DFGELVLVLGDMHIPHR IPEKFKKMLVPNKMQHVLCTGN+V K+QY++LR LAPNVH+VRGDF+ES+++P+ KV+ IGQFR+GL HGHQIVPWGD + LA QR+L DIL
Sbjct: 3 DFGELVLVLGDMHIPHRAVDIPEKFKKMLVPNKMQHVLCTGNMVTKEQYDELRGLAPNVHIVRGDFDESSNYPDKKVITIGQFRIGLCHGHQIVPWGDVDCLAALQRKLNVDIL 116
BLAST of mRNA_C-linearis_contig10.515.1 vs. uniprot
Match:
A0A485KLT9_9STRA (Vacuolar protein sorting-associated protein 29 n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485KLT9_9STRA)
HSP 1 Score: 189 bits (479), Expect = 4.760e-54
Identity = 84/117 (71.79%), Postives = 101/117 (86.32%), Query Frame = 2
Query: 188 MAGDFGELVLVLGDMHIPHREAAIPEKFKKMLVPNKMQHVLCTGNLVGKDQYNDLRTLAPNVHVVRGDFEESTSFPESKVVQIGQFRVGLTHGHQIVPWGDPNALAMAQRQLGADIL 538
MA DFGELVL++GDMHIPHR IPEKFKKMLVPNKMQHVLCTGN+V K+Q+++LR LAPNVH+VRGDF+E ++P+ KV+ IGQFR+GL HGHQIVPWGD ++LA QR+L DIL
Sbjct: 1 MAADFGELVLIVGDMHIPHRAVDIPEKFKKMLVPNKMQHVLCTGNMVTKEQFDELRDLAPNVHIVRGDFDELCNYPDKKVITIGQFRIGLCHGHQIVPWGDADSLAALQRKLNVDIL 117
BLAST of mRNA_C-linearis_contig10.515.1 vs. uniprot
Match:
A0A6V3BCL2_HETAK (Vacuolar protein sorting-associated protein 29 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V3BCL2_HETAK)
HSP 1 Score: 188 bits (477), Expect = 1.420e-53
Identity = 86/115 (74.78%), Postives = 104/115 (90.43%), Query Frame = 2
Query: 197 DFGELVLVLGDMHIPHREAAIPEKFKKMLVPNKMQHVLCTGNLVGKDQYNDLRTLAPNVHVVRGDFEE-STSFPESKVVQIGQFRVGLTHGHQIVPWGDPNALAMAQRQLGADIL 538
DFGELVLVLGDMHIPHRE+AIPEKF++MLVPNKMQHVLCTGNLV ++QY+DLR+LAPNVHVVRGDF++ S ++P++KVV IGQ ++GL HGHQ+VPWGD ++L M QRQL DIL
Sbjct: 8 DFGELVLVLGDMHIPHRESAIPEKFRRMLVPNKMQHVLCTGNLVTQEQYDDLRSLAPNVHVVRGDFDDASANYPDTKVVTIGQIKIGLCHGHQVVPWGDLDSLEMLQRQLDVDIL 122
BLAST of mRNA_C-linearis_contig10.515.1 vs. uniprot
Match:
A0A1V9ZFC7_9STRA (Vacuolar protein sorting-associated protein 29 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZFC7_9STRA)
HSP 1 Score: 187 bits (475), Expect = 1.920e-53
Identity = 87/119 (73.11%), Postives = 103/119 (86.55%), Query Frame = 2
Query: 188 MAGDFGELVLVLGDMHIPHREAAIPEKFKKMLVPNKMQHVLCTGNLVGKDQYNDLRTLAPNVHVVRGDFEE--STSFPESKVVQIGQFRVGLTHGHQIVPWGDPNALAMAQRQLGADIL 538
MA DFGELVLV+GD+HIPHR IPEKFKKMLVPNKMQHV+CTGNLV K+Q+++LR LAPNVHVVRGDF+E ST+FP+ KV+ IGQFR+G+ HGHQIVPWGD ++LA QR+L DIL
Sbjct: 1 MAADFGELVLVVGDLHIPHRALDIPEKFKKMLVPNKMQHVVCTGNLVTKEQFDELRDLAPNVHVVRGDFDEVESTTFPDKKVITIGQFRIGICHGHQIVPWGDVDSLAALQRKLNVDIL 119
BLAST of mRNA_C-linearis_contig10.515.1 vs. uniprot
Match:
A0A024TMU1_9STRA (Vacuolar protein sorting-associated protein 29 n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TMU1_9STRA)
HSP 1 Score: 187 bits (474), Expect = 2.450e-53
Identity = 85/114 (74.56%), Postives = 97/114 (85.09%), Query Frame = 2
Query: 197 DFGELVLVLGDMHIPHREAAIPEKFKKMLVPNKMQHVLCTGNLVGKDQYNDLRTLAPNVHVVRGDFEESTSFPESKVVQIGQFRVGLTHGHQIVPWGDPNALAMAQRQLGADIL 538
DFGELVLVLGDMHIPHR IPEKFKKMLVPNKMQHVLCTGNLV K+Q+++LR LAPNVH+VRGDF+E + +P+ KVV IGQFR+GL HGHQIVPWGD + L QR+L DIL
Sbjct: 3 DFGELVLVLGDMHIPHRAVDIPEKFKKMLVPNKMQHVLCTGNLVTKEQFDELRDLAPNVHIVRGDFDEGSHYPDKKVVTIGQFRIGLCHGHQIVPWGDVDCLGALQRKLNVDIL 116
BLAST of mRNA_C-linearis_contig10.515.1 vs. uniprot
Match:
A0A7S2S7P2_9STRA (Vacuolar protein sorting-associated protein 29 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S7P2_9STRA)
HSP 1 Score: 186 bits (473), Expect = 3.440e-53
Identity = 83/117 (70.94%), Postives = 103/117 (88.03%), Query Frame = 2
Query: 188 MAGDFGELVLVLGDMHIPHREAAIPEKFKKMLVPNKMQHVLCTGNLVGKDQYNDLRTLAPNVHVVRGDFEESTSFPESKVVQIGQFRVGLTHGHQIVPWGDPNALAMAQRQLGADIL 538
MA DFGELVLV+GD+ IPHR A+IPE+FK+MLVPNKMQHVLCTGNLV K+Q+++ R+LAPN+HVV+GDF+++ FPE KVVQIGQFR+GL HGHQ+VPWGDP AL+ QRQ+ DI+
Sbjct: 1 MASDFGELVLVVGDVLIPHRAASIPEQFKRMLVPNKMQHVLCTGNLVTKEQFDEFRSLAPNMHVVKGDFDDNPLFPEQKVVQIGQFRIGLIHGHQVVPWGDPIALSTVQRQMDVDII 117
BLAST of mRNA_C-linearis_contig10.515.1 vs. uniprot
Match:
A0A835ZKD1_9STRA (Vacuolar protein sorting-associated protein 29 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKD1_9STRA)
HSP 1 Score: 187 bits (475), Expect = 3.480e-53
Identity = 87/117 (74.36%), Postives = 102/117 (87.18%), Query Frame = 2
Query: 194 GDFGELVLVLGDMHIPHREAAIPEKFKKMLVPNKMQHVLCTGNLVGKDQYNDLRTLAPNVHVVRGDFEESTS--FPESKVVQIGQFRVGLTHGHQIVPWGDPNALAMAQRQLGADIL 538
GDFGELVLVLGD+HIPHR AAIPEKF++MLVPNKM+HVLCTGNLV KD+Y +LR LAPNVHVV GDF++S + +PESKVV IG +R+GL HGHQ+VPWGDP AL++ QRQL DIL
Sbjct: 2 GDFGELVLVLGDLHIPHRAAAIPEKFRRMLVPNKMKHVLCTGNLVTKDRYEELRALAPNVHVVSGDFDDSAAAAWPESKVVHIGAWRIGLVHGHQVVPWGDPAALSILQRQLDCDIL 118
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.515.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 7.58e-74 / Id = 97.44 Expect = 1.72e-56 / Id = 78.07 Expect = 1.53e-55 / Id = 72.88 Expect = 1.58e-54 / Id = 75.44 Expect = 4.76e-54 / Id = 71.79 Expect = 1.42e-53 / Id = 74.78 Expect = 1.92e-53 / Id = 73.11 Expect = 2.45e-53 / Id = 74.56 Expect = 3.44e-53 / Id = 70.94 Expect = 3.48e-53 / Id = 74.36 Sequence D7FZW9_ECTSI A0A7S2FLA0_9STRA A0A7S2BTX2_9STRA W4GLS4_9STRA A0A485KLT9_9STRA A0A6V3BCL2_HETAK A0A1V9ZFC7_9STRA A0A024TMU1_9STRA A0A7S2S7P2_9STRA A0A835ZKD1_9STRA Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 239.6 Seed ortholog evalue 1.2e-60 Seed eggNOG ortholog 2880.D7FZW9 Preferred name VPS29 KEGG ko ko:K07095,ko:K18467 KEGG Pathway ko04144,map04144 Hectar predicted targeting category other localisation GOs GO:0000139,GO:0000323,GO:0001881,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005767,GO:0005768,GO:0005770,GO:0005771,GO:0005773,GO:0005794,GO:0005802,GO:0005829,GO:0006605,GO:0006623,GO:0006810,GO:0006886,GO:0006892,GO:0006896,GO:0007034,GO:0008104,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0010008,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016192,GO:0016197,GO:0016482,GO:0023051,GO:0030139,GO:0030904,GO:0030906,GO:0031090,GO:0031410,GO:0031902,GO:0031982,GO:0031984,GO:0032009,GO:0032010,GO:0032588,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042147,GO:0042886,GO:0043112,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044260,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0045335,GO:0046872,GO:0046907,GO:0046914,GO:0048193,GO:0050789,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0065007,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0072594,GO:0072665,GO:0072666,GO:0097708,GO:0098588,GO:0098791,GO:0098796,GO:0098805,GO:0098876,GO:1990126 EggNOG free text desc. retrograde transport, endosome to Golgi EggNOG OGs COG0622@1,KOG3325@2759 Ec32 ortholog description similar to Vacuolar protein sorting 29 (Vesicle protein sorting 29) Ec32 ortholog Ec-22_003790.1 COG Functional cat. IQ Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko04131 Exons 4 Model size 1449 Cds size 588 Stop 1 Start 1
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622927337.041939-UTR-C-linearis_contig10:1661870..1662544 1622927337.041939-UTR-C-linearis_contig10:1661870..1662544 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig10 1661871..1662544 - 1690879634.768554-UTR-C-linearis_contig10:1661870..1662544 1690879634.768554-UTR-C-linearis_contig10:1661870..1662544 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig10 1661871..1662544 - 1622927337.0791914-UTR-C-linearis_contig10:1664291..1664317 1622927337.0791914-UTR-C-linearis_contig10:1664291..1664317 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig10 1664292..1664317 - 1690879634.8225565-UTR-C-linearis_contig10:1664291..1664317 1690879634.8225565-UTR-C-linearis_contig10:1664291..1664317 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig10 1664292..1664317 - 1622927337.0875483-UTR-C-linearis_contig10:1665319..1665480 1622927337.0875483-UTR-C-linearis_contig10:1665319..1665480 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig10 1665320..1665480 - 1690879634.8333855-UTR-C-linearis_contig10:1665319..1665480 1690879634.8333855-UTR-C-linearis_contig10:1665319..1665480 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig10 1665320..1665480 -
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622927337.0505784-CDS-C-linearis_contig10:1662544..1662782 1622927337.0505784-CDS-C-linearis_contig10:1662544..1662782 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 1662545..1662782 - 1690879634.7826722-CDS-C-linearis_contig10:1662544..1662782 1690879634.7826722-CDS-C-linearis_contig10:1662544..1662782 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 1662545..1662782 - 1622927337.0590837-CDS-C-linearis_contig10:1663254..1663434 1622927337.0590837-CDS-C-linearis_contig10:1663254..1663434 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 1663255..1663434 - 1690879634.7932787-CDS-C-linearis_contig10:1663254..1663434 1690879634.7932787-CDS-C-linearis_contig10:1663254..1663434 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 1663255..1663434 - 1622927337.0692604-CDS-C-linearis_contig10:1664121..1664291 1622927337.0692604-CDS-C-linearis_contig10:1664121..1664291 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 1664122..1664291 - 1690879634.8080876-CDS-C-linearis_contig10:1664121..1664291 1690879634.8080876-CDS-C-linearis_contig10:1664121..1664291 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 1664122..1664291 -
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig10.515.1
>prot_C-linearis_contig10.515.1 ID=prot_C-linearis_contig10.515.1|Name=mRNA_C-linearis_contig10.515.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=196bp
MAGDFGELVLVLGDMHIPHREAAIPEKFKKMLVPNKMQHVLCTGNLVGKD back to top mRNA from alignment at C-linearis_contig10:1661871..1665480-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig10.515.1 ID=mRNA_C-linearis_contig10.515.1|Name=mRNA_C-linearis_contig10.515.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3610bp|location=Sequence derived from alignment at C-linearis_contig10:1661871..1665480- (Chordaria linearis ClinC8C monoicous)GCCTGCTTCGACCTACCACTGTCTGCTCGTGTGCTACTGACTGCTGTGCT
ACTGAACGCCAAGCGTAAAGCACGCCTTCTCCAACAGCCTCTCCCTTTGG
AGGAGCTCGCTTGTGCCTTGAGAGGCTCGTAGGCGACAAGCATTCGGTGC
AGCACCTGGCG GTGAGTTATACAGATGATCTCCGAGTGTCGTCACTGATT
GCCGAGTGTGTGCTGCACGCCAAAGGCTCTCGCCACGTTGCTGCTGAAAA
ACAGCGCACCAACTTATTGAGGCTTCCGCTCATGCAGCTACTCACCCCTG
TACTTAGCTAGGAGAGAGCGACTGAATGCATGGTAGAGTACACACAGCAG
ATGCGGCGGGATTGGTTGCTCCGCACTCACGACTCCCGTCTTTGCCCTTT
TCACGACTCGCGACTGCCTCTGGGGACGAACAGCTTCCACGGGAGTACGA
ATTACAGCTCGACGTTAGGACACGATGCCCGTCTTGGATGCCTGCAAGAT
TTTGTGCTTCTCCTTGTATGGGGTGCCTGCGGCAAGTAGTGCATTCCTTC
TGTCAGGCATGTGTTTGATCTCCACGCCATCGGCCTTCGATGACCACACC
AGCAGCACGCACGAAGCCAGTGGTCTGACAGCTCCCAACATTCTCTATGT
GATCGGGTGCTTTGTTCCGGCTGCCTAGTGGTGATCCTTTTCTTTTGAAA
ATCGGTTTCTGGACAGCGAAATGAGGAGGTCCGCGACACGTACCTCCCTG
GAAAAGTAGACGCTACCCAAGTAGAAAGCGAGTAGAAATGGAATCGATCA
GTAAAGACCACGACATGACGCACACAGTAGGCTAGTATCGACACACCCGC
ACCGCTCTGCCGATGGTCATTGCAGCTCGCCCGGGGGGGGTTACTCTCCC
GTCCCTTACACACAGCGGCGTTAGTTCCCACGTTTGGCACCTCTAGCCAT
ACCCAAATGTTAATGTTTGTATGTATGTGTTCCCTTAGGTTGTGCCGGGA
AACGCGCAGGGGTCTCTCACGCAAGCCACGCGGACTTTCGCAACAACATG
ATAAGATCCCGAACCTCCCGAACTAGAAAATACCTTTGCTCCAACCTACC
CGCCCACTAGACTCCACCATGCCCCTGTTGATACGCCGTCGGTGTACTGC
TGTCGTCGCACAGGATTCCAGCCATTTGCTGAGGTGACC ATGGCCGGGGA
CTTCGGGGAGCTGGTGCTGGTCCTGGGGGACATGCACATCCCGCACCGAG
AGGCGGCGATCCCGGAGAAGTTCAAGAAGATGTTGGTGCCCAATAAGATG
CAGCACGTGCTGTGCACGGGGAACCTGGTGGGGAAAGACCAGTACAACGA
CCTTCGAAC GTGAGCATGGGCGTTCCATGTGCCTATTTTACCGGGAAAGT
TGGGGGTTGGGGTCAGGGCGTACAGCAGTATTGCTTCGACATTCGATATT
CGATATTCGGTACTGGTATGTACGCACGTGCTGGCGTGAAATAATCCTGC
CTGCCGCCAACAATTTAACGCGGCTGCTGCTGTTGTATTTATTGCTCACG
TTTGGTTCCAAGCCCCCACTCTAATGACTAGCTGGCTTTTTCGGCGCAAA
CTTTCAGATAGATGTCGAACTACAGCAGTTTAGAAGGTCTTCATGGGAGT
TCTGTCGGGTGGATAATTTTTCCCCTCCTTTTGCGTAGCTCTTGTTTTTG
GGGCGGTAAATCCACCGATGCATGTCCTTTGCAGCAAGGGCATTTGCAGG
CGTTTTGGCGAACGCAAAAGTACTTGGAAACCTTTTCTTGGAAACATATC
GCTTCAGAGGTTTACGAAATGGGAGAGCATCAAGAATGGCGTGAGTCCCG
GGAAACATGGTTGCATTCCACCATTGAAAGGCGCAAAAAACATCGTGAAC
AGGGATAGTCAATGCAGCCCTAGGACATGCCCACATCAACGCCCAACGTC
CGAATGCCCCTTTGACAAGCACACATTGAACACTCGTCCTCATTTTCTCG
ATCATGCCCGCCCTCTCCCGTAAAATCGAATTCTTCGCATTTACAGACTG
GCGCCAAACGTTCACGTGGTGCGCGGGGACTTCGAAGAGTCGACGAGCTT
TCCGGAGTCGAAGGTGGTGCAGATAGGGCAGTTCCGGGTGGGCCTCACCC
ACGGCCACCAGATCGTGCCGTGGGGCGACCCCAACGCGCTGGCGATGGCG
CAGCGGCAGCTGGGGGCGGACATCCT GGTGTCAGGGCACACGCATCGGAA
TCAGGTCAGCGCTGATCTTTGGCGTGTGTTTTTTTTTCTGTGCCGTTTCG
TCCGAGGATTACTGTTACAAAAAGTGGATGCTTCGACGTTCGTAGAAGTG
CGTGGAAGCTCGGCTCTTGCTTTGATTTCAGTTTCTTCTTGAAAGACTTT
CGCCGCTCTTCGGGGAGCCGAGTAATGCTTCGTTGTCGCTTCTATTTTCT
CCGCGTGTAGCGGGCCCCCCGCTTTTGTGACAGCCGCCTACGTTTTAGAC
CTATCTTAGCAAATGTGAAGTTGTGCTCCCGTTCGGGGCGGGTGAAGGAG
GCTGCGTGTGCCAACAACTCCCCCTGGAACGATTGATTTTTTCACAGGTT
AGACGTATACCGCTGACGTTTGGTCGAACAATTCAAGAAAACGACGACCT
CATGAACAACATCCATTCACCAACTGCACACCCTTAACACGCTCACCTTA
AACACAGGTCAACGAGTTCGGCGGACGGTGGTTCATCAACCCGGGCTCCA
TCACGGGGGCCTACTCCGCCCTCGAATCCGAGGCGGTGCCGAGCTTCATC
CTGCTGGCGGTGCAGGGCGCCAAGTGCGTCACGTACGTGTACGAACTGCA
CGGGGACCAGGTGGAGGTGTCCAAGAGCGAGTTCAGCAAAGCTCCCGCAT
GAGACGTCATCGAGAGAGAAGTTGGATTTGATTTGA ATGTACGTGTGAAG
GCGTCAGAAGAGCGACTTCAGCGAAGCTCCGGCATAAGAGGGAGAGCAAG
CGAGAGAGAACTTGGACATGTGGATTTGATTTGACGCAGGGTTTTCTCTC
ATGCCGACGAGGTGTCCGAGGGCGAGTTAAGCAAAGGTCTGCCGAAGCCG
TAAGGCTTGGGTATATATTGGGTCAATTTTTCCAGTTTTGTTCCTCTGTT
CGCTTGATTTGTTCTTGTTCTTGTCTTCATATTAAAAACCATCCCGTCTC
TCTCCACCCAGCACCCCCCTTTGTCCGTACTGATCGAGCAGACACGGCCA
ATTTCCGTGGTCACAGGTTAACTTACCCTAAAAAGGTGTACTAGGGTTGA
TTTGGGCATGATTCATACCGCCGGGTAGTTTTTGCCCATGTACGAGCTTT
ACTGGAGCAACTAAATGCGCCCAGAAAGTGCTGCAAAGCTCTTTGAGGAG
GGAGTCTTGGGCTCGGTTTACGTCGTTGCTGCCCTTCAGATGTTTTTTGT
TGTCAGCATGATGTTTTGAATTTGTGGGGGCCTCATTTTTGCGGGAGTGG
TGAGGTGGGGGAAAAAACGCCATTCAACCTCACTCACCGCAGTCCGACTT
CGAAGCTTTGCTTGTTTCCCGCAATACTCCAGCGTAGCCTTTCAAGATTG
GAGATATGTT back to top Coding sequence (CDS) from alignment at C-linearis_contig10:1661871..1665480-
>mRNA_C-linearis_contig10.515.1 ID=mRNA_C-linearis_contig10.515.1|Name=mRNA_C-linearis_contig10.515.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1176bp|location=Sequence derived from alignment at C-linearis_contig10:1661871..1665480- (Chordaria linearis ClinC8C monoicous) back to top