mRNA_C-linearis_contig10.484.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_C-linearis_contig10.484.1 vs. uniprot
Match: A0A6H5L4R0_9PHAE (RNase H type-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4R0_9PHAE)

HSP 1 Score: 501 bits (1291), Expect = 6.330e-167
Identity = 322/485 (66.39%), Postives = 353/485 (72.78%), Query Frame = 1

Query:  100 MVKKLPACYGIRKGRGAPVVVHSWSEVVAKTNGFPGADFRKFKTPEEASNYANQAEAEGGALNPAPEGWASMWFDGGCRGNPGPSGAGAVIFNDKEKELYSGYKYLGEGKTNNEAEYESVILGLRAAAKLGAKQVVVKGDSMLVIQQMMGKWRVSAPKLVGLHKQASEVVRLNELKCTWHHVQRKHNVRADLLANIAMDSKSMDEIYDPSTGVANAPPNAXXXXXXXXXXXXXXXXXXXXXXPPTLPGIVPTLPGIGGAA------------PASSPPGTTLTXXXXXXXXXXXXXXXXXXXSSSSPVPRSIDEAREVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLRLPGGAAAREAWAEPATAR-------RFMVHLASWRKAEDEAGAAAAVLYEGAWWKRLNASCFLVSRCPRPPPSPPGTAEADKRRAGTGADKRGLSPASNALRILGQVLNEIDLAGGGKVGVVTNEPALAELLS 1497
            MVKKLPACYGIRKGRGAPVVVHSW+EVVAKTNGFPGADFRKFKTPEEA++YAN  + EGG LNPAP GW+++WFDGGCRGNPGPSGAGAVIFND EKELYSGYKYLGEGKTNNEAEYESVILGL+AAAKL   Q+VVKGDSMLVIQQMMGKWRVSAPKLVGLH+QASEVV+ ++LKCTWHHV RK NVRADLLANIAMDSKSMDEIYDPSTGV N  PNA XXXXXXXXXXXXXXXXXXXXX      IVPTLPGIGG+A            P + PP  +L X                  +S S VPRSI+EARE   XXXXXXXXXXXXX                GL++P G AAR  WA  AT         RF+VHLASWRK E + GA AA++ E   +KRL A           PP  P  AEA+KRRA     +RGLS A   LR+L QVL+EI+  GGG V VVTNEPAL +LLS
Sbjct:    1 MVKKLPACYGIRKGRGAPVVVHSWAEVVAKTNGFPGADFRKFKTPEEATDYANLVD-EGGGLNPAPAGWSTLWFDGGCRGNPGPSGAGAVIFNDSEKELYSGYKYLGEGKTNNEAEYESVILGLKAAAKLSITQLVVKGDSMLVIQQMMGKWRVSAPKLVGLHRQASEVVKQHQLKCTWHHVPRKLNVRADLLANIAMDSKSMDEIYDPSTGVVNTAPNAAXXXXXXXXXXXXXXXXXXXXXXXXXXXIVPTLPGIGGSAGTTVASTSAAPAPVTLPP-PSLKXPSILPGATDAYPPPPASAASVSAVPRSIEEAREXXXXXXXXXXXXXXXXDARASIAAGGGVTSTSGLKVPDGQAARAMWASLATGSLTESSPPRFLVHLASWRKTETDLGAVAAIVQEERMFKRLTA-----------PPGVPA-AEAEKRRAAAADQRRGLSAAGTGLRVLAQVLDEIEQIGGGNVAVVTNEPALVDLLS 471

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BLAST of mRNA_C-linearis_contig10.484.1 vs. uniprot
Match: D7FZY9_ECTSI (Ribonuclease H n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY9_ECTSI)

HSP 1 Score: 440 bits (1131), Expect = 5.790e-147
Identity = 298/479 (62.21%), Postives = 333/479 (69.52%), Query Frame = 1

Query:  172 SEVVAKTNGFPGADFRKFKTPEEASNYANQAEAEGGALNPAPEGWASMWFDGGCRGNPGPSGAGAVIFNDKEKELYSGYKYLGEGKTNNEAEYESVILGLRAAAKLGAKQVVVKGDSMLVIQQMMGKWRVSAPKLVGLHKQASEVVRLNELKCTWHHVQRKHNVRADLLANIAMDSKSMDEIYDPSTGVANAPPNAXXXXXXXXXXXXXXXXXXXXXXPPTLPGIVPT----------LPGIGGAA------------PASSPPGTTLTXXXXXXXXXXXXXXXXXXXSSSSPVPRSIDEAREVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLRLPGGAAAREAWAEPATAR-------RFMVHLASWRKAEDEAGAAAAVLYEGAWWKRLNASCFLVSRCP---RPPPSPPGT--AEADKRRAGTGA--DKRGLSPASNALRILGQVLNEIDLAGGGKVGVVTNEPALAELLSV 1500
            S +V  TNGFPGADFRKFKTPEEA++YAN  + EGG LNPAP GW+++WFDGGCRGNPGPSGAGAVIFND EKELYSGYKYLGEGKTNNEAEYESVILGL+AAAKL   Q+VVKGDSMLVIQQMMGKWRVSAPKLVGLH+QASEVV+ ++LKCTWHHV RK NVRADLLANIAMDSKSMDEIYDPSTGV N  PNA  XXXXXXXXXXXXXXXXXXXXP                   LPGIGG+A            P + PP  +L                    +S+S VPRSI+EAREVAAXXXXXXXXXXXXX                GL++P G AAR  WA  AT         RF+VHLASWRK E + GA AA++ E   +KRL      V+RC    +P  +PPG   AEA+KRRA   A   +RGLS A   LR+L QVL+EI+  GGG V VVTNEPAL +LLSV
Sbjct:    2 SYLVRLTNGFPGADFRKFKTPEEATDYANLVD-EGGGLNPAPAGWSTLWFDGGCRGNPGPSGAGAVIFNDSEKELYSGYKYLGEGKTNNEAEYESVILGLKAAAKLSITQLVVKGDSMLVIQQMMGKWRVSAPKLVGLHRQASEVVKQHQLKCTWHHVPRKLNVRADLLANIAMDSKSMDEIYDPSTGVVNTAPNAAAXXXXXXXXXXXXXXXXXXXXPAAXXXXXXXXXXXXXXXXXLPGIGGSAGTTVASTSAAPAPVTLPP-ASLKPPSILPGATDAYPPPPVSAASASAVPRSIEEAREVAAXXXXXXXXXXXXXDARASIAAGGGVTSTSGLKVPDGQAARAMWASLATGSLAESSPPRFLVHLASWRKTETDLGAVAAIVQEEGMFKRLT-PVLRVTRCATPAQPAQAPPGVPAAEAEKRRAVAAAADHRRGLSAAGTGLRVLAQVLDEIEQIGGGNVAVVTNEPALVDLLSV 477

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BLAST of mRNA_C-linearis_contig10.484.1 vs. uniprot
Match: A0A6U1LVX6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1LVX6_9STRA)

HSP 1 Score: 141 bits (356), Expect = 2.500e-35
Identity = 97/235 (41.28%), Postives = 124/235 (52.77%), Query Frame = 1

Query:  124 YGIRKGRGAPVVVHSWSEVVAKTNGFPGADFRKFKTPEEASNYA-----------------------NQAEA----EGGALNP--------APEGWAS----MWFDGGCRGNPGPSGAGAVIFNDK--EKELYSGYKYLGEGKTNNEAEYESVILGLRAAAKLGAKQVVVKGDSMLVIQQMMGKWRVSAPKLVGLHKQASEVVRLNELKCTWHHVQRKHNVRADLLANIAMDSKS 705
            Y I  GR  P +V +W E   +  GF GA F+ F    EA  +                        N A+A     GGA +P        APE  A     M+FDG  RGNPG  GAGAVI+     E +L+ GY+YLGE  TNNEAEY + +LGL+AAA  G + + V GDSMLVI Q  GKW+V+A  L+ LH+ A +++R      +  HV R+ N  AD LAN A+DSKS
Sbjct:    7 YAIANGRNGPKIVRTWKECSQEVQGFSGAVFKGFSEQAEAETFLLMYGVSADLQESPGEENKSSQRPNLAKAWVEQHGGARDPLEDEMEEKAPEKPAQDRPVMFFDGASRGNPGEGGAGAVIYTSDSFENQLWRGYRYLGEC-TNNEAEYTAFLLGLQAAADAGIQNLKVCGDSMLVINQATGKWKVNAENLMPLHENAKKLIRTMP-GLSLRHVPREENTVADGLANQALDSKS 239

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BLAST of mRNA_C-linearis_contig10.484.1 vs. uniprot
Match: A0A6T8JIG0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8JIG0_9STRA)

HSP 1 Score: 115 bits (289), Expect = 2.040e-26
Identity = 68/153 (44.44%), Postives = 96/153 (62.75%), Query Frame = 1

Query:  277 GALNPAP-EGWA-------SMWFDGGCRGNPGPSGAGAVIFNDKEKELYSGYKYLGEGKTNNEAEYESVILGLRAAAKLGAKQVVVKGDSMLVIQQMMGKWRVSAPKLVGLHKQASEVVRLNELKCTWH--HVQRKHNVRADLLANIAMDSKS 705
            G  NP P EG+        ++ FDGG RGNPG SGAG VI+NDK +E+++G   L +  TNNEAEY +++ GL+ A +LG + + V+GDS L++ Q+ G+++V +  L   H+ A E   L     T+   H+ R+ N RAD LANIAMDS S
Sbjct:   19 GGPNPEPKEGFTIDPNQTYNLQFDGGSRGNPGLSGAGMVIYNDKSQEVWNGSYLLPKEATNNEAEYTALVKGLQHARRLGIRHLAVQGDSNLIVMQITGRYKVKSQHLKPFHRDAVE---LRSAFSTFEISHIPREENGRADELANIAMDSAS 168

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BLAST of mRNA_C-linearis_contig10.484.1 vs. uniprot
Match: A0A7S2KCF7_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KCF7_9STRA)

HSP 1 Score: 112 bits (281), Expect = 9.740e-26
Identity = 58/144 (40.28%), Postives = 88/144 (61.11%), Query Frame = 1

Query:  283 LNPAPEGWASMWFDGGCRGNPGPSGAGAVIFNDKEKELYSGYKYLGEGKTNNEAEYESVILGLRAAAKLGAKQVVVKGDSMLVIQQMMGKWRVSAPKLVGLHKQASEVVR-LNELKCTWHHVQRKHNVRADLLANIAMDSKSMD 711
            LN +P     + FDGG RGNPG +GAG V++++   E++ G  YLGE  TNNEAEY  ++ GL+ A  +G   +VV+GDS L+++Q+ GK++  + KL+        +++  N  +    H+ R+ N RAD LAN AMD +  D
Sbjct:    3 LNVSPYRTYVLQFDGGSRGNPGTAGAGMVLYDEVGHEVWHGRHYLGEHSTNNEAEYTGLLAGLKCARAIGVSNIVVQGDSELIVKQLQGKYKCKSSKLIPYFTSVKSLIKGFNSFEV--RHIPREQNFRADELANEAMDWREND 144

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BLAST of mRNA_C-linearis_contig10.484.1 vs. uniprot
Match: A0A6C0CSI6_9ZZZZ (RNase H type-1 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0CSI6_9ZZZZ)

HSP 1 Score: 112 bits (280), Expect = 1.380e-25
Identity = 65/131 (49.62%), Postives = 90/131 (68.70%), Query Frame = 1

Query:  310 SMWFDGGCRGNPGPSGAGAVIFNDKEKELYSGYKYLGEGKTNNEAEYESVILGLRAAAKLGAKQVVVKGDSMLVIQQMMGKWRVSAPKLVGLHKQASEVVRL-NELKC-TWHHVQRKHNVRADLLANIAMD 696
            ++ FDGG RGNPG +GAG VI+ D  +E+YSG   LG   TNN AEY+ + LGL  A K G + +++KGDS+LV+ Q+  KW+V   K + L +Q + V +L N+L+  T  HV+RK+N RAD LAN+AMD
Sbjct:   27 TLMFDGGSRGNPGTAGAGFVIYKDM-REIYSGCAPLGHA-TNNYAEYKGLELGLTCAIKKGIESLIIKGDSLLVLNQITNKWKV---KSISLKEQYTNVKKLLNQLRSYTVEHVKRKYNKRADELANMAMD 152

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BLAST of mRNA_C-linearis_contig10.484.1 vs. uniprot
Match: A0A6C0HQK6_9ZZZZ (RNase H type-1 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0HQK6_9ZZZZ)

HSP 1 Score: 111 bits (277), Expect = 3.240e-25
Identity = 59/124 (47.58%), Postives = 88/124 (70.97%), Query Frame = 1

Query:  313 MWFDGGCRGNPGPSGAGAVIFNDKEKELYSGYKYLGEGKTNNEAEYESVILGLRAAAKLGAKQVVVKGDSMLVIQQMMGKWRVSAPKLVGLHKQASEVVRLNELKCTWHHVQRKHNVRADLLAN 684
            ++FDG C+GNPGP GAGAVI+N+   EL++   ++G+  TNN AEY  +I+GL+ +AKLG K + V GDS LVI+QM G ++V++  LV L+K A ++ +  +   +++HV RK N RAD L+N
Sbjct:   26 LFFDGCCKGNPGPGGAGAVIYNNGI-ELWADCVFVGKKITNNIAEYTGLIIGLKQSAKLGIKNIAVNGDSQLVIKQMNGIYKVTSENLVELYKTAKQLEKSFD-SISYNHVYRKDNKRADELSN 147

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BLAST of mRNA_C-linearis_contig10.484.1 vs. uniprot
Match: A0A061RJK7_9CHLO (Ribonuclease h n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RJK7_9CHLO)

HSP 1 Score: 112 bits (280), Expect = 1.050e-24
Identity = 83/235 (35.32%), Postives = 114/235 (48.51%), Query Frame = 1

Query:  124 YGIRKGRGAPVVVHSWSEVVAKTNGFPGADFRKFKTPEEASNYANQAEAE-------------------------------------GGALNPAPEGWASMWFDGGCRGNPGPSGAGAVIFNDKEKELYSGYKYLGEGKTNNEAEYESVILGLRAAAKLGAKQVVVKGDSMLVIQQMMGKWRVSAPKLVGLHKQASEVVRLNELKCTWHHVQRKHNVRADLLANIAMDSKSMDEI 717
            Y + +GR A  V  SW+E   +  GF GA F+ F     A N+  Q  A                                      G AL+ +      + FDGG R NPGP+GAGAVI+    + L+ G+ +LG   TNN AEY  ++ GLR AA LG K++ V+GDS LV++QM G++RV    L  LH+    VV   +   T+ HV R  N  AD LAN A+D++   E+
Sbjct:    7 YAVARGR-ASGVFSSWAECEKQVKGFKGALFKGFPNKHLAENFIMQNVASPCTPSRIGVSRTEHESPDRESQRPPKRHRKSEAPCEPGAALSSSVH---LLRFDGGSRRNPGPAGAGAVIWAPSGECLWRGWLWLGVA-TNNVAEYTGLLFGLRKAAALGLKRLAVEGDSDLVMKQMNGEYRVKNTALRSLHRDCKVVVGQMD-HVTFRHVYRSTNHEADSLANRAIDTRESSEV 235

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BLAST of mRNA_C-linearis_contig10.484.1 vs. uniprot
Match: A0A7S2I3Y3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I3Y3_9STRA)

HSP 1 Score: 110 bits (274), Expect = 4.060e-24
Identity = 60/131 (45.80%), Postives = 88/131 (67.18%), Query Frame = 1

Query:  319 FDGGCRGNPGPSGAGAVIFNDKE-KELYSGYKYLGEGKTNNEAEYESVILGLRAAAKLGAKQVVVKGDSMLVIQQMMGKWRVSAPKLVGLHKQASEVVRLNELKCTW--HHVQRKHNVRADLLANIAMDSK 702
            FDGG RGNPG +G+G V+++ +E  E++SG KYLGE  TNN AEY  ++ G++ A  LGA+ +V +GDS+LV+ Q+ G+W+V   K  GL     EV++L     ++  +H+ R+ N RAD LAN AMD +
Sbjct:   76 FDGGSRGNPGVAGSGMVLYDAEEGAEVWSGQKYLGEDSTNNVAEYTGLLTGMKCAYALGARHIVAQGDSLLVVNQLNGEWKV---KNQGLKPIFQEVMKLRGQFESFQINHIPREENSRADRLANKAMDDR 203

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BLAST of mRNA_C-linearis_contig10.484.1 vs. uniprot
Match: A0A535LZB1_9CHLR (Ribonuclease HI family protein n=3 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535LZB1_9CHLR)

HSP 1 Score: 108 bits (271), Expect = 4.170e-24
Identity = 58/127 (45.67%), Postives = 86/127 (67.72%), Query Frame = 1

Query:  322 DGGCRGNPGPSGAGAVIFNDKEKELYSGYKYLGEGKTNNEAEYESVILGLRAAAKLGAKQVVVKGDSMLVIQQMMGKWRVSAPKLVGLHKQASEVVRLNELKCTWHHVQRKHNVRADLLANIAMDSK 702
            DGG RGNPGP+  G VI +D+ ++L + +K+LG   TNN+AEY+++I GL+A        + V  DS LV++Q+ GKW+V  P+L GLH+QA+++++    K T  HV R+ N RAD L N+A+D K
Sbjct:   44 DGGARGNPGPAALGVVIEDDQGEKLRTFHKWLGVA-TNNQAEYQALIEGLKAMKDWEFDHLDVYMDSKLVVEQVNGKWKVKEPELQGLHRQATDLLKQFGDKVTVQHVAREENRRADKLVNMAIDEK 169

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig10.484.1 vs. uniprot

BLAST of mRNA_C-linearis_contig10.484.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25

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Match Name	E-value	Identity	Description
A0A6H5L4R0_9PHAE	6.330e-167	66.39	RNase H type-1 domain-containing protein n=1 Tax=E...	[more]
D7FZY9_ECTSI	5.790e-147	62.21	Ribonuclease H n=1 Tax=Ectocarpus siliculosus TaxI...	[more]
A0A6U1LVX6_9STRA	2.500e-35	41.28	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A6T8JIG0_9STRA	2.040e-26	44.44	Hypothetical protein (Fragment) n=1 Tax=Proboscia ...	[more]
A0A7S2KCF7_9STRA	9.740e-26	40.28	Hypothetical protein n=1 Tax=Leptocylindrus danicu...	[more]
A0A6C0CSI6_9ZZZZ	1.380e-25	49.62	RNase H type-1 domain-containing protein n=1 Tax=v...	[more]
A0A6C0HQK6_9ZZZZ	3.240e-25	47.58	RNase H type-1 domain-containing protein n=1 Tax=v...	[more]
A0A061RJK7_9CHLO	1.050e-24	35.32	Ribonuclease h n=1 Tax=Tetraselmis sp. GSL018 TaxI...	[more]
A0A7S2I3Y3_9STRA	4.060e-24	45.80	Hypothetical protein n=1 Tax=Helicotheca tamesis T...	[more]
A0A535LZB1_9CHLR	4.170e-24	45.67	Ribonuclease HI family protein n=3 Tax=Chloroflexi...	[more]

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