Homology
BLAST of mRNA_C-linearis_contig10.462.1 vs. uniprot
Match:
A0A6H5LRB6_9PHAE (RRM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LRB6_9PHAE)
HSP 1 Score: 382 bits (981), Expect = 2.510e-122
Identity = 206/269 (76.58%), Postives = 221/269 (82.16%), Query Frame = 1
Query: 76 MAKVIRKELEQKLAALGGEEWDSMSESDLSGDYNNETSDGEELKPPPLXXXXXXXXXXXXXXXXXXGKGP-SVVPVGPAGQPSGVVRIGHIPHGFYEEAMNGFFKQFGDVIRVRISRSKKSGRCKGYAYVEFVSPEVAEIVAETMNGYYLFDKQLVCRVLRFDEIHPNLFDGAGVKFRKVNWHGLYRQKYNADRTPAKDEKHTGKLLKKDKAKKDKLAKLGIDYVFPGFLATLNDRQAAEEPFQGQQQPKRARRNSKG----DGKEGQE 867
MAKVIR++LEQKLAAL G EWDSMSESDLSG E SDG+ELKPPPL GKG SVVPVGPAG+PSGVV IGHIPHGFYEEAMNGFFKQFGDVIRVRISRSKKSGRCKGYAYVEF SPEVA+IVAETMNGYYLFDKQLVCRVL+F+EIHPNLFDGAGVKFRKVNWHGLYR+KYNADRT KDEKHT KLLKKDKAKKDKLAKLGIDY FPGF+ATL DR A+ PFQ +PK A++N + DGK G+E
Sbjct: 1 MAKVIRRDLEQKLAALEGAEWDSMSESDLSG---GEASDGDELKPPPLPRHAKKAGRK--------GKGGGSVVPVGPAGEPSGVVYIGHIPHGFYEEAMNGFFKQFGDVIRVRISRSKKSGRCKGYAYVEFASPEVAQIVAETMNGYYLFDKQLVCRVLKFEEIHPNLFDGAGVKFRKVNWHGLYREKYNADRTQVKDEKHTAKLLKKDKAKKDKLAKLGIDYDFPGFVATLKDRNVAKGPFQ---KPKGAKQNKESAKVEDGKGGKE 255
BLAST of mRNA_C-linearis_contig10.462.1 vs. uniprot
Match:
A0A369RRV5_9METZ (MKI67 FHA domain-interacting nucleolar phosphoprotein-like n=1 Tax=Trichoplax sp. H2 TaxID=287889 RepID=A0A369RRV5_9METZ)
HSP 1 Score: 172 bits (435), Expect = 1.280e-45
Identity = 76/148 (51.35%), Postives = 108/148 (72.97%), Query Frame = 1
Query: 322 GVVRIGHIPHGFYEEAMNGFFKQFGDVIRVRISRSKKSGRCKGYAYVEFVSPEVAEIVAETMNGYYLFDKQLVCRVLRFDEIHPNLFDGAGVKFRKVNWHGLYRQKYNADRTPAKDEKHTGKLLKKDKAKKDKLAKLGIDYVFPGFLA 765
GV+ +GHIPHGFYEE M GFF QFGD+ ++R+SRSK+SGR +GYA++EF + +VA IVAETMN Y + + L C++++ + +HP F GA KFRK+NW L +++ NA +T ++ K KL+K + ++ KL KLGIDY FPG+ A
Sbjct: 48 GVIYVGHIPHGFYEEEMKGFFSQFGDINKIRLSRSKRSGRSRGYAFIEFSNQDVATIVAETMNNYMMCGRLLKCQLMKSESVHPETFKGANRKFRKINWRELAKKQANAPKTDQENTKVVNKLIKAENVRRKKLQKLGIDYQFPGYAA 195
BLAST of mRNA_C-linearis_contig10.462.1 vs. uniprot
Match:
B3S8Q0_TRIAD (RRM domain-containing protein (Fragment) n=1 Tax=Trichoplax adhaerens TaxID=10228 RepID=B3S8Q0_TRIAD)
HSP 1 Score: 169 bits (428), Expect = 1.690e-45
Identity = 74/146 (50.68%), Postives = 107/146 (73.29%), Query Frame = 1
Query: 325 VVRIGHIPHGFYEEAMNGFFKQFGDVIRVRISRSKKSGRCKGYAYVEFVSPEVAEIVAETMNGYYLFDKQLVCRVLRFDEIHPNLFDGAGVKFRKVNWHGLYRQKYNADRTPAKDEKHTGKLLKKDKAKKDKLAKLGIDYVFPGFL 762
V+ +GHIPHGFYEE M GFF QFGD+ ++R+SRSK+SGR +GYA++EF + +VA IVAETMN Y + + L C++++ + +HP F GA KFRK+NW L +++ NA +T ++ K KL+K + ++ KL KLGIDY FPG++
Sbjct: 1 VIYVGHIPHGFYEEEMKGFFSQFGDINKIRLSRSKRSGRSRGYAFIEFSNQDVATIVAETMNNYMMCGRLLKCQLMKSESVHPETFKGANRKFRKINWRELAKKQANAPKTDQENTKVVNKLIKAENVRRKKLQKLGIDYQFPGYV 146
BLAST of mRNA_C-linearis_contig10.462.1 vs. uniprot
Match:
A0A197JPK7_9FUNG (FHA domaininteracting nucleolar phospho protein putat n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JPK7_9FUNG)
HSP 1 Score: 170 bits (430), Expect = 1.090e-44
Identity = 81/166 (48.80%), Postives = 120/166 (72.29%), Query Frame = 1
Query: 298 VGPAGQP-----SGVVRIGHIPHGFYEEAMNGFFKQFGDVIRVRISRSKKSGRCKGYAYVEFVSPEVAEIVAETMNGYYLFDKQLVCRVLRFDEIHPNLFDGAGVKFRKVNWHGLYRQKYNADRTPAKDEKHTGKLLKKDKAKKDKLAKLGIDYVFPGFLATLNDR 780
+G GQP +GVV +G IPHGFYE+ MN +F QFG V+R+R+SR+KK+G+ K YA++EF S EVA+IVA+TM+ Y LF QL C+ L+ +IHP +F GA KF+ + W + ++K+NA+++ A+ ++ KLLK + AK+ KLA+LGIDY FPG+ A + ++
Sbjct: 56 LGSLGQPKDKSATGVVYLGRIPHGFYEDQMNAYFSQFGKVLRLRLSRNKKTGKSKHYAFIEFASQEVADIVADTMDNYLLFGHQLKCKALQPTQIHPAMFLGANKKFKAIPWQKISKEKHNAEKSAAQMKQVAKKLLKNESAKRAKLAELGIDYEFPGYKANIQEK 221
BLAST of mRNA_C-linearis_contig10.462.1 vs. uniprot
Match:
A0A1Y2H203_9FUNG (RRM domain-containing protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2H203_9FUNG)
HSP 1 Score: 170 bits (431), Expect = 2.070e-43
Identity = 79/154 (51.30%), Postives = 113/154 (73.38%), Query Frame = 1
Query: 319 SGVVRIGHIPHGFYEEAMNGFFKQFGDVIRVRISRSKKSGRCKGYAYVEFVSPEVAEIVAETMNGYYLFDKQLVCRVLRFDEIHPNLFDGAGVKFRKVNWHGLYRQKYNADRTPAKDEKHTGKLLKKDKAKKDKLAKLGIDYVFPGFLATLNDR 780
+GVV +G IPHGFYEE M +F QFG V+R+R+SR+KK+G+ K YA++EF S EVAEIVA+TMN Y LF QL C+ L+ +IHP +F GA KF+ + W + ++K+NA++T + + KLLK + AK+ KLA+LGIDY FPG+ A++ ++
Sbjct: 187 TGVVYLGRIPHGFYEEQMKAYFSQFGKVLRLRLSRNKKTGKSKHYAFIEFASQEVAEIVADTMNNYLLFGHQLKCKALQPSQIHPAMFSGANKKFKAIPWLKIAKEKHNAEKTTVQSNQIKKKLLKNEAAKRAKLAELGIDYDFPGYKASVPEK 340
BLAST of mRNA_C-linearis_contig10.462.1 vs. uniprot
Match:
A0A4P9YU86_9FUNG (RRM domain-containing protein (Fragment) n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9YU86_9FUNG)
HSP 1 Score: 163 bits (412), Expect = 3.660e-43
Identity = 75/148 (50.68%), Postives = 107/148 (72.30%), Query Frame = 1
Query: 322 GVVRIGHIPHGFYEEAMNGFFKQFGDVIRVRISRSKKSGRCKGYAYVEFVSPEVAEIVAETMNGYYLFDKQLVCRVLRFDEIHPNLFDGAGVKFRKVNWHGLYRQKYNADRTPAKDEKHTGKLLKKDKAKKDKLAKLGIDYVFPGFLA 765
GVV +G IPHGFYE+ M G+F QFG V R+R+SR+KK+GR K YA+VEF +VA++VA+TMN Y LF L C+V+ ++H LFDGA KF+ + H + R+++N RTP + E+HT +LL+K++ K+ +L GIDY FPGF++
Sbjct: 1 GVVYVGRIPHGFYEDEMRGYFGQFGTVSRLRLSRNKKTGRSKHYAFVEFADADVADVVADTMNNYLLFGHLLKCQVVPAHKVHARLFDGANRKFKPLPLHKMAREEHNRTRTPEEVERHTKRLLRKEQQKRKRLQDAGIDYAFPGFVS 148
BLAST of mRNA_C-linearis_contig10.462.1 vs. uniprot
Match:
A0A7S3XMA8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMA8_HETAK)
HSP 1 Score: 165 bits (418), Expect = 6.540e-43
Identity = 104/230 (45.22%), Postives = 144/230 (62.61%), Query Frame = 1
Query: 76 MAKVIRKELEQKLAALGGEEWDSMSESDLSGDYNNETSDGEELKPPPLXXXXXXXXXXXXXXXXXXGKGPSVVPVGPAGQPSGVVRIGHIPHGFYEEAMNGFFKQFGDVIRVRISRSKKSGRCKGYAYVEFVSPEVAEIVAETMNGYYLFDKQLVCRVLRFDEIHPNLFDGAGVKFRKVNWHGLYRQKYNADRTPAKDEKHTGKLLKKDKAKKDKLAKLGIDYVFPGFLA 765
M+KV+RKELE KLA+L EW SES+ GD + T + PPP XXXXXXXXXXX + S VV +GHIPHGFYE+ M FF QFGDV +R+SRS++ GR +GYA++EF S EVA+IVAETM+GY+L DKQL C ++ +++H +F + K + +W R+ +N +T + + +LL+K+ K+ +LA LGI+Y FPG+ A
Sbjct: 9 MSKVLRKELEAKLASLEDPEW--ASESENEGDEGS-TEASKVSNPPPAEKXXXXXXXXXXX------------------KESAVVYLGHIPHGFYEKEMGSFFDQFGDVKHLRLSRSRRGGRSRGYAFIEFYSAEVAQIVAETMHGYFLEDKQLQCHIVPKEKVHERMFQASCRKLKVEDWQKFAREDHNKPKTQKQMDASVSRLLQKEGKKRRRLAALGIEYDFPGYAA 217
BLAST of mRNA_C-linearis_contig10.462.1 vs. uniprot
Match:
A0A0D2JTS4_9CHLO (Putative RNA-binding protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2JTS4_9CHLO)
HSP 1 Score: 158 bits (400), Expect = 7.300e-41
Identity = 75/154 (48.70%), Postives = 106/154 (68.83%), Query Frame = 1
Query: 310 GQPSGVVRIGHIPHGFYEEAMNGFFKQFGDVIRVRISRSKKSGRCKGYAYVEFVSPEVAEIVAETMNGYYLFDKQLVCRVLRFDEIHPNLFDGAGVKFRKVNWHGLYRQKYNADRTPAKDEKHTGKLLKKDKAKKDKLAKLGIDYVFPGFLATL 771
G S VV IGH+PHGFYE+ + GFF QFG + RVR+SRSKK+GR K YA++EF PEVA I AE M+G+++F ++L R L+ E+HP LF GA KF++V W + +++N RTP + K LL++D+ ++ K+A+ GIDY + G A L
Sbjct: 38 GDLSSVVYIGHLPHGFYEDQLLGFFSQFGRLSRVRVSRSKKTGRAKHYAFLEFAVPEVARIAAEAMDGHFMFAQRLSVRCLKQGEVHPLLFKGANRKFKQVPWRKIEAERHNRPRTPQEHAKRVAVLLRRDRKRQAKIAEAGIDYEYDGLAAAL 191
BLAST of mRNA_C-linearis_contig10.462.1 vs. uniprot
Match:
A0A2V0P5R3_9CHLO (RRM domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P5R3_9CHLO)
HSP 1 Score: 158 bits (400), Expect = 7.300e-41
Identity = 73/151 (48.34%), Postives = 103/151 (68.21%), Query Frame = 1
Query: 319 SGVVRIGHIPHGFYEEAMNGFFKQFGDVIRVRISRSKKSGRCKGYAYVEFVSPEVAEIVAETMNGYYLFDKQLVCRVLRFDEIHPNLFDGAGVKFRKVNWHGLYRQKYNADRTPAKDEKHTGKLLKKDKAKKDKLAKLGIDYVFPGFLATL 771
S VV IGH+PHGFYE + GFF QFG + RVR+SRSKK+GR K YA++EF PEVA I AE M G+++F ++L R L+ E+HP LF GA KF++V W + +++N DRTP + KLL++D+ +++++ GIDY + G A L
Sbjct: 41 SNVVYIGHLPHGFYERELLGFFSQFGRLTRVRVSRSKKTGRAKHYAFLEFAVPEVARIAAEAMEGHFMFAQRLSVRCLKRREVHPELFKGANRKFKQVPWRKIEAERHNRDRTPQEHAARVAKLLRRDRKRRERIRAAGIDYEYDGLEAAL 191
BLAST of mRNA_C-linearis_contig10.462.1 vs. uniprot
Match:
A0A086TK93_9FUNG (RRM domain-containing protein n=1 Tax=Podila verticillata NRRL 6337 TaxID=1069443 RepID=A0A086TK93_9FUNG)
HSP 1 Score: 164 bits (415), Expect = 8.580e-41
Identity = 76/151 (50.33%), Postives = 112/151 (74.17%), Query Frame = 1
Query: 319 SGVVRIGHIPHGFYEEAMNGFFKQFGDVIRVRISRSKKSGRCKGYAYVEFVSPEVAEIVAETMNGYYLFDKQLVCRVLRFDEIHPNLFDGAGVKFRKVNWHGLYRQKYNADRTPAKDEKHTGKLLKKDKAKKDKLAKLGIDYVFPGFLATL 771
+GVV +G IPHGFYEE M +F QFG V+R+R+SR+KK+G+ K YA++EF S EVA+IVA+TM+ Y LF QL C+ L+ +IHP +F GA KF+ + W + + K+NAD++ ++ ++ + KLLK + AK+ KLA LGI+Y FPG+ A++
Sbjct: 229 TGVVYLGRIPHGFYEEQMQAYFTQFGKVLRLRLSRNKKTGKSKHYAFIEFASQEVADIVADTMDNYLLFGHQLKCKALQPSQIHPAMFVGANKKFKAIPWQKISKDKHNADKSASQIKQVSKKLLKNESAKRAKLADLGIEYDFPGYKASV 379
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.462.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 2.51e-122 / Id = 76.58 Expect = 1.28e-45 / Id = 51.35 Expect = 1.69e-45 / Id = 50.68 Expect = 1.09e-44 / Id = 48.80 Expect = 2.07e-43 / Id = 51.30 Expect = 3.66e-43 / Id = 50.68 Expect = 6.54e-43 / Id = 45.22 Expect = 7.30e-41 / Id = 48.70 Expect = 7.30e-41 / Id = 48.34 Expect = 8.58e-41 / Id = 50.33 Sequence A0A6H5LRB6_9PHAE A0A369RRV5_9METZ B3S8Q0_TRIAD A0A197JPK7_9FUNG A0A1Y2H203_9FUNG A0A4P9YU86_9FUNG A0A7S3XMA8_HETAK A0A0D2JTS4_9CHLO A0A2V0P5R3_9CHLO A0A086TK93_9FUNG Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 384.8 Seed ortholog evalue 5.7e-104 Seed eggNOG ortholog 2880.D7G018 Preferred name NOP15 KEGG ko ko:K14838 Hectar predicted targeting category other localisation GOs GO:0000910,GO:0000912,GO:0000915,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006996,GO:0007010,GO:0007049,GO:0008150,GO:0009987,GO:0016043,GO:0019843,GO:0022402,GO:0022607,GO:0022613,GO:0030029,GO:0030036,GO:0030684,GO:0030687,GO:0030865,GO:0030866,GO:0031032,GO:0031974,GO:0031981,GO:0032506,GO:0032991,GO:0042254,GO:0042273,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0044837,GO:0051301,GO:0061640,GO:0070013,GO:0071840,GO:0097159,GO:1901363,GO:1990904 EggNOG free text desc. RNA binding EggNOG OGs KOG4208@1,KOG4208@2759 Ec32 ortholog description RNA recognition motif domain Ec32 ortholog Ec-22_003260.1 COG Functional cat. B Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko03009 Exons 3 Model size 2297 Cds size 1383 Stop 1 Start 1
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622927330.1995554-UTR-C-linearis_contig10:916540..916615 1622927330.1995554-UTR-C-linearis_contig10:916540..916615 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig10 916541..916615 + 1690879629.9061904-UTR-C-linearis_contig10:916540..916615 1690879629.9061904-UTR-C-linearis_contig10:916540..916615 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig10 916541..916615 + 1622927330.244955-UTR-C-linearis_contig10:921002..921841 1622927330.244955-UTR-C-linearis_contig10:921002..921841 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig10 921003..921841 + 1690879629.9523604-UTR-C-linearis_contig10:921002..921841 1690879629.9523604-UTR-C-linearis_contig10:921002..921841 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig10 921003..921841 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622927330.21183-CDS-C-linearis_contig10:916615..916987 1622927330.21183-CDS-C-linearis_contig10:916615..916987 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 916616..916987 + 1690879629.9212575-CDS-C-linearis_contig10:916615..916987 1690879629.9212575-CDS-C-linearis_contig10:916615..916987 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 916616..916987 + 1622927330.221759-CDS-C-linearis_contig10:919581..919787 1622927330.221759-CDS-C-linearis_contig10:919581..919787 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 919582..919787 + 1690879629.929421-CDS-C-linearis_contig10:919581..919787 1690879629.929421-CDS-C-linearis_contig10:919581..919787 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 919582..919787 + 1622927330.2302935-CDS-C-linearis_contig10:920197..921002 1622927330.2302935-CDS-C-linearis_contig10:920197..921002 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 920198..921002 + 1690879629.9403346-CDS-C-linearis_contig10:920197..921002 1690879629.9403346-CDS-C-linearis_contig10:920197..921002 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig10 920198..921002 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig10.462.1
>prot_C-linearis_contig10.462.1 ID=prot_C-linearis_contig10.462.1|Name=mRNA_C-linearis_contig10.462.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=461bp
MAKVIRKELEQKLAALGGEEWDSMSESDLSGDYNNETSDGEELKPPPLPL back to top mRNA from alignment at C-linearis_contig10:916541..921841+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig10.462.1 ID=mRNA_C-linearis_contig10.462.1|Name=mRNA_C-linearis_contig10.462.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=5301bp|location=Sequence derived from alignment at C-linearis_contig10:916541..921841+ (Chordaria linearis ClinC8C monoicous)CAGGCTCACCAGTATCAAGGTACCAAGCAAGGTATCAAACCGCACGAGGC
CTTCTACCCACACACGCACGCAAAG ATGGCGAAGGTCATCCGGAAGGAGC
TCGAGCAGAAGCTGGCGGCCCTGGGTGGCGAGGAGTGGGACAGCATGAGC
GAGAGCGACCTGAGCGGCGACTACAACAACGAGACATCCGATGGCGAGGA
GCTCAAGCCGCCGCCGCTCCCCCTGCACGCCCAGCAGCAGCAGCAGAAGA
AGAAGAAGGGCAACAAGCGGAAGGGCAAGGGTCCGTCGGTGGTACCCGTG
GGGCCCGCGGGGCAGCCCTCGGGGGTGGTGCGCATCGGGCACATCCCGCA
CGGGTTCTATGAGGAGGCCATGAATGGTTTCTTCAAGCAGTTCGGCGATG
TCATCCGAGTTCGCATCTCGAGGAGCAAGAAAAGCGGACGGTGCAAG GTG
TGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGACTGGGTGGGGTGT
GCTTCGACAACGGGTGGGCTGGGCGGGGGAGTGGTGCTCGATTGGTGAAG
GTGTCGGGATGCGAGATGGTGGCTCTCATTTCAGGGTGTTGTATTCCCTT
TTGCCCGATTAGGACCCAAAATACAAAGGCCGTGGCTGTGCTGCCAGGGC
TTGCCCCTCCACACAACCCCGCCTGTACATCAAAACAGGGGGAGTGGTCG
ATGGGAGTTGCTGGTTCGCTGGCTTTCTTGTGCTGTCAACAACGTACATT
GAAAACCGCCTTTGCCGTAGTCGACGAACTACTGCTGTATCTCCAGTGAT
CGGGTACTTGCTTGTTGTACATATCATGAGGTTGCCGTTGTTTCAAACCT
CGGGGATGGCCGCGTTCCCAAGCACATGTTTTAAATTTTTAAATCAGGCT
GTGCATTGATATACGGAGTAATCTATGGTATTGTAGACGGCGGCATCACA
AGGTCGCATCTGAACTTGCCCCCTGATCACGGTTCAAGATTAGCATTTTG
TTATTGTTCCCATCGGTGTCAATACTCCCACCGGCTCGGGCTCGACACAC
ACGCTGGAAACAGCAGTAGCATGATTTTCATGTGTCACGCGATTTACACC
GCCGTCACACCTCTGCCTGTGTTCAGCGATCTGCCTCTCGTCTGCGGAAG
TATTTTATGTAGCTAATAACAGGACCGGTCGCCCCGGTGGTCTAGTGGTA
TCCCCGTAACCATCTAGCATGCGGGTTCATGGGTTCGAATCCCGGCGCAA
GCGACTTTTTCTCACACAACGTGTGTTTTTTCTCTCGCTTTCGTTCCTGT
CAGTGGAAAGCGCTTAATTCGTGTGTACACTTGAGGGAGAGACGGCTGAA
ACTCTCTCGCGTTAAAAATTACCAGGCAAGCACCGCAAAAGAAGGTGGGC
GGGGAGCTCAGGGAGAGGAGCCTTCTGTGTGACCACGGTTCAGATGTTCT
GGCAAGATGCCCCGCGTGGCGAGGCGCCCCTGCAAACTCTGAAAAAAAAT
GTTGAGACGAAAAACAAAACAATGGCCGAGCATGCCCTATTCTTCCCTGC
TGCTTGACTTGATCATAGGCCAGAGGGCACTCCATAACAGCAGTAGTATA
CGCACCACTTTGTAAAATATGGGAAAGCACCAAGGATATCATACGGCTGT
GTTGAACGTCTACACCAGACACGTTTTTGTGTTATTGCGCATAATTTGAC
GGCCTCACACCTCCTGGAGCGAACAAAGTCAGGTTGCTCCACAACTGCTC
CACAACGAGGGTGTGTGTATACCGACATGACATCGATACCGACATGACAC
CGATGCCGACATGGCATCGATACCGACATGACATCGATACCATACGCTCT
TTCGACAAGAAAAGCCTCCCTCGGCTAGATCTTCGGAATGCCATCCTCAT
ATGGGCATCGATCGGCCTACTGCTGTTTGATACGGAGTATGAAGATCGAT
ACGACAATCTGCTGCAATCCTCAACACACAAGCTTGCATACGTCTGCACC
TCTTTTGAGGGGACGGTGAGGGGTATACTAAAACTAGTATAGTCCTTTTT
GGAGCAAATATCATACCCCCGGCTGAACTTCACGGAGCCTCACTTGAAAT
TAGTCTAGGATATCCAAGCAACGGACGCTTTTGCAGCCTTGTCAGAGGTA
TTCCGAGATTTCCAGCTCTTTTTTGTGAAAAACGCGGTGTATTTGGCTTC
AGTTTTTAACCACCCTTTGCCCGAAAAAAAATTATAAGTGTGCGCTTTTC
GGCTGACCATGTCCTGGAGTATTTCTATGCTCCTGTCGCAACCGGGCTAC
ATTCGCGTCAAGTCCGTTTTTTTGTTGGGGCAGAAACCTCGGTGTGAGGC
TCCGGGGCGTTGATCCAAATATTCACGCTGTGGACCAAAAAAGAGCGGTT
GAAAAAACCCAGTCACGAAAATATCTCAAGCGTGGCTTCTAGCTATCTGC
TGCTGCTGTCGACGACATGCGACGGCCCCTACACACCATATCAGTAGGCC
CTGCTAGCGGCTTGCGCCTGTTTGTGCTCGTGAGAGCCTCGCTCGATGAC
TTCGTGAGCACCAAGTGCTCGCTCAGATGCCCGTTTGACAGTCTTTTCAA
AAGAGCGATTTTTGCACGGTTTTTAAACAAAAGGTCCGCGTTCCCGCGCA
CCTACAAAGAAAGGGCACACTTCTTTTCTGTAGAGATATGCAAACTGTTT
CATATGAAATACTCGAGGGTTTATACAGCAGCACGCTAAGGGTCGAACTG
GAAAAGTGTGTTTTAGGAGCTTTCTGGAGGGCCCGTGTGGTCATTTTCAC
ATACCCAAAGAAAATACTTCGTAGTAATTTAGATACACAAAAATCAATCG
CTTGTGTGTTTCACTGAGCCCCAACAACCACTACATCTGCGAACCCCCCC
TTGCCGACGCCTTAAGATTCCTCCATGCCGCCGCCTCCTTGAAGTTGAAG
GGCACGCTTACGATACACGCATGTATCCCTCAAGATAGACGCATAACCTT
CAACATCGTTGTCCGCACCGCTGCGTCCCACGGCACTGAAGGGCTACGCC
TACGTGGAATTCGTGTCCCCGGAGGTAGCCGAGATCGTTGCCGAGACGAT
GAACGGCTACTACCTGTTCGACAAGCAGCTGGTCTGCCGCGTGCTCCGCT
TCGACGAGATCCACCCCAACCTCTTCGACGGCGCCGGCGTCAAGTTCCGC
AAGGTCAATTGGCACGGCCTCTACCGACAGAAGTACAACGCCGACCG GTG
AGAGAGAGGCGCAATCTTGCTTACGACAAACGGCCGTATTCGACAGAGTA
GATACCACACACCTGGACCGATTTCCAAAGCTCGGTTACTCCGCAACGAG
TATTTATTTCAATACCAAACGACACGGTTTCGGACAGCTCTCGACGAGCT
CGACGAGATATTTCCAGCGACGCTCTTTTCCCTTTTCGGAACTGCCACCG
ACTTTTGGGTATTTGAAAATAGACACAAACAGTTGCTTTCTACGTTTTGC
CTTTTGCATCACTCGAAGCTCTTAACGCTTACCGTAGTTTGTAGCGCTGT
TAAATGTGTATGTCGTACGTACGTATGCCTCCGTCCTGGACGTAAATGGA
TGACGCTCATCTGACTGCGGCTTCCTTCCGTTACCGCTTACCACCAAAAT
CCCGCAGGACGCCTGCCAAGGACGAGAAACACACGGGCAAGCTGCTCAAG
AAGGACAAGGCGAAGAAGGACAAGCTCGCCAAGCTCGGCATCGACTACGT
TTTCCCGGGGTTCTTGGCCACCCTCAACGACCGCCAAGCGGCGGAGGAGC
CGTTCCAGGGGCAGCAACAACCAAAGCGCGCCAGGAGGAATAGCAAGGGG
GACGGAAAGGAGGGGCAGGAGGGAGGGGCGGGGGCGGCGGCGGAAGCAAC
GCCAGCAGCATCGAAGGCAGAGGAGAAGGGGGCGGCCGCTGCGAAGGCGT
CTCCGAAGAAGGCACCGGCAATGGCACCCAGCGCGAAGAAGTCATCGGCC
GCGAAGAAGCCGCCGGCAGCAACGGCAGCAGCAGCAGCAGCAACAACAAC
AACAGAATCGGCAACAACGCCCAAGGGCAAGAAGGCCAAGACACCCACCA
AGAAGCCCAAGGCATTAGCGGCGAAGGAAGGAGGAGAGGACGCTGCGCCG
ACGAGCCCCGCAGCGGCGGCGGCGGCTCCCGGAGGAGCAAAGGGCGCCAA
GTCTCCGGGCAGTGGGAAGGCGAAGGGCTCGAACAAGAAGACGAAGGCGC
CCAAGACACCCGAGCCAGCCGTCGCCGCTGCTACCGTTGCCGGTGCAGGC
TCCGAGGGTAAAAAGGCAAAGTCGCCGAAAAGCGGCGGGGGCAGGAAAAA
GAGGCCGTTGGAGGAGACTGCCGAGACGCCAGTAGCACCAGCAGCGGCGG
CGCCGGACACGGGCACGGGGTCGGGGAAGAAACCCAAGAGCGCGAAGCGC
TCTAAGGTGTAG AAAGACGGAGGGGCAGACGGGTAGATAACGGGCGGAAG
GGCCCCTTGGTGCGGCGGAGTTGATTGTTGGCGGTTGTCTTGTGTGCGGT
GTTCGACTCTCTTTTTTTTTTTTGGCTTCAAGGCTGCTTTGACTTGAGCT
TGGGCCTTAGCGCTCTAAAGTGTGGACAGACAGGCAGGCAGGCAGTCTAG
CTTAGCTAGGCCTGCAGTTGATGTGATGGATGTTTTTGCAATCCCTTCGA
TTTATCCGGCTTCAAGGTGCCAAACCTGCTGCTTGTGCCCCATGTGGATC
ATGGCTAGGTGACATAACACCCGTACGTCGTAGCTGGGCAGTCGTTCGCT
TGCAGGAAGCAGCGGAGTTGACAGTTTTATCCTGCGGTGCTCAACGAGCC
GAATATGTGCGTAGGTTCATAATCCCTGAAGCGTCAGTACCTTGGCGTCG
GCGTCGACGAAGCGGATACGGGGCTTATTTCGCCGCGGCCGTGACGTTTA
TTGATGCGGTTATTGGCGTTTTTTCCGTGCATGCCATGTGTGGCTGGTCC
TCCGGGGTCGTTTGTAACAGCTTCGCTTTGTGATTTAAGTCATGTGAGGG
AACAGGAATGCAGAATGCCGTCAAAGTGTCCTTTACCACCCGCCCGGGTG
GGCGTTCGTACGCGGTGGCGCTGGGCCATGTCTGTACCTGTACAGCCAGC
AGAGACCATGTGGGTCGGAACTTCAGCGTCGGGCGAGTTAATAATTGGCA
GTCAACCCGCAGGTAGTTCGCCGCCATGGCTAAAATTTGATAGTTTGGCA
TCAATAGCGGCGCTTCGCTTATAAATTTAAAAAAAAACATGGTACATAAC
A back to top Coding sequence (CDS) from alignment at C-linearis_contig10:916541..921841+
>mRNA_C-linearis_contig10.462.1 ID=mRNA_C-linearis_contig10.462.1|Name=mRNA_C-linearis_contig10.462.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2766bp|location=Sequence derived from alignment at C-linearis_contig10:916541..921841+ (Chordaria linearis ClinC8C monoicous) back to top