prot_A-nodosum_M_contig1016.4.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1016.4.1
Unique Nameprot_A-nodosum_M_contig1016.4.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length194
Homology
BLAST of mRNA_A-nodosum_M_contig1016.4.1 vs. uniprot
Match: A0A6P0N5L4_9CYAN (Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842 RepID=A0A6P0N5L4_9CYAN)

HSP 1 Score: 179 bits (455), Expect = 9.920e-49
Identity = 84/181 (46.41%), Postives = 119/181 (65.75%), Query Frame = 0
Query:    1 MENLFEEATVNAVIKKPNPQSAAGLSGLRYSHLQAALSDELVEDLAAFATLVFTSRVLPHGFWTLKASANLCALGQKARPVACGDVLRRVIGAVFCSRYGRKLADYFQSWGPCGVAISGGVEIMGLTATLGFEEGYTTLSYDGANVFNSICHLRFLPALAEIVPLVVPYASNLYIREPPKL 181
            +E  F   TV A I++ NPQ + G SGLR+S LQ++L+ EL E +A   +++F    LP  FW L  SANL A+G K RP+A GD+ RR++G V C +YG  LA++F+  G  GVA+ GG E++   A L  ++G   L+YD  N FNS+     LPALA+++P ++PYA+N+Y REPPKL
Sbjct: 1154 VEEPFATETVTATIRRGNPQGSPGPSGLRFSLLQSSLTPELCEAIAKLCSVIFDGSHLPDSFWQLHTSANLSAIGDKCRPIAVGDLFRRIVGGVICRQYGPSLAEHFEPQGQYGVAVPGGTELLAARAFLAHQKGQCLLAYDARNAFNSMKRSAILPALADLIPPMLPYATNIYAREPPKL 1334          
BLAST of mRNA_A-nodosum_M_contig1016.4.1 vs. uniprot
Match: A0A836CGN9_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGN9_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 5.740e-19
Identity = 63/190 (33.16%), Postives = 89/190 (46.84%), Query Frame = 0
Query:    5 FEEATVNAVIKKPNPQSAAGLSGLRYSHLQAALSD-----ELVEDLAAFATLVFTSRV-LPHGFWTLKASANLCALGQ-------KARPVACGDVLRRVIGAVFCSRYGRKLADYFQSWGPCGVAISGGVEIMGLTATLGFEEGYTTLSYDGANVFNSICHLRFLPALAEIVPLVVPYASNLYIREPPKL 181
             E  TV  +I++ +P S AGLSGLRYSHLQ AL       E    L  +   V      LP  FW L  +  L  L +       K RP+ CG+VL+R+  +V+ +     LA+  +  G  GVA+S G E   +   L +E G+     D  N FN +  L     +A  +P  + Y    Y+R  P+L
Sbjct:  320 IEPETVAKLIQRASPYSGAGLSGLRYSHLQDALRTSWGRHEFAAVLTRWLQTVMREAARLPDAFWQLHGAGRLTPLAEQQEDGTAKQRPIVCGEVLQRLCTSVYVADRKDFLAELLEPDGQYGVAVSAGAEKAAMAGKLAYELGHWQFMLDLKNAFNMVFVLAAAEWVAAQLPDFLDYFIGTYVRTRPRL 509          
BLAST of mRNA_A-nodosum_M_contig1016.4.1 vs. uniprot
Match: A0A226DV40_FOLCA (Retrovirus-related Pol polyprotein from type-1 retrotransposable element R1 n=1 Tax=Folsomia candida TaxID=158441 RepID=A0A226DV40_FOLCA)

HSP 1 Score: 57.8 bits (138), Expect = 2.250e-6
Identity = 53/179 (29.61%), Postives = 73/179 (40.78%), Query Frame = 0
Query:   10 VNAVIKKPNPQSAAGLSGLRYSHL-------QAALSDELVEDLAAFATLVFTSRVLPHGFWTLKASANLCALGQKA---RPVACGDVLRRVIGAVFCSRYGRKLADYFQSWGPCGVAISGGVEIMGLTATLGFEEGYTT----LSYDGANVFNSICHLRFLPALAEIVPLVVPYASNLY 174
            +   I    P SA GL  LR   L       Q  + D+L+E +  F   V +  V P  F  +   A+L AL +K    RPVA G+V RR+   +   R    L +Y       GV + GG E     A + +   +TT    L  D  N FN I     L  + E  P +  + S  Y
Sbjct:  188 ITTAISSFPPGSAGGLDSLRPQILKDLVATEQGEVGDKLIEAILNFTNFVLSGGV-PAQFCPIFYGASLTALKKKTGGIRPVAVGNVWRRLSAKIALKRMSSDLVEYLAPH-QLGVGVRGGAEAAAHAARIYWGFAHTTSKAFLKVDFNNAFNEIRRDTVLKIIHERFPSMFSFLSQAY 364          
BLAST of mRNA_A-nodosum_M_contig1016.4.1 vs. uniprot
Match: A0A226F2H2_FOLCA (Pickpocket protein 28 n=1 Tax=Folsomia candida TaxID=158441 RepID=A0A226F2H2_FOLCA)

HSP 1 Score: 55.8 bits (133), Expect = 1.080e-5
Identity = 49/170 (28.82%), Postives = 73/170 (42.94%), Query Frame = 0
Query:   19 PQSAAGLSGLRYSHLQAALSDE-------LVEDLAAFATLVFTSRVLPHGFWTLKASANLCALGQKA---RPVACGDVLRRVIGAVFCSRYGRKLADYFQSWGPCGVAISGGVEIMGLTATLGFEEGYTT----LSYDGANVFNSICHLRFLPALAEIVPLVVPYASNLY 174
            P SA GL  LR   L+  ++ E       L++ +  F  +V +  V P  F  +   A+L AL +K    RPVA G+V RR++  +  +R    L  Y       GV + GG E     A + +   +T     L  D +N FN I     L  + E  P +  + S  Y
Sbjct: 1408 PGSAGGLDSLRPQILKDLITTEQGEEGRKLIKAILNFTNVVLSGGV-PDSFCPIFYGASLTALVKKTGGIRPVAVGNVWRRLVAKIALARMSPTLVKYLAPH-QLGVGVKGGAEAAAHAARIYWGYAHTAPKAFLKVDFSNAFNEIRRDTILNIICERFPSMFSFLSQAY 1575          
BLAST of mRNA_A-nodosum_M_contig1016.4.1 vs. uniprot
Match: A0A2E0Z6G4_9CHLR (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A2E0Z6G4_9CHLR)

HSP 1 Score: 54.7 bits (130), Expect = 2.750e-5
Identity = 46/179 (25.70%), Postives = 68/179 (37.99%), Query Frame = 0
Query:    5 FEEATVNAVIKKPNPQSAAGLSGLRYSHLQ--AALSDELVEDLAAFATLVFTSRVLPHGFWTLKASANLCAL----GQKARPVACGDVLRRVIGAVFCSRYGRKLADYFQSWGPCGVAISGGVE---IMGLTATLGFEEGYTTLSYDGANVFNSICHLRFLPALAEIVPLVVPYASNLY 174
            F +  V   ++     S+ GL+ L   HL+    +    V +      L     ++P     L   A L  L    G+  RPVA GDVLRR+ G +          ++F +    GVA+ GG +   I           G+     D  N FN+      L  +A   P + PYA   Y
Sbjct: 1991 FGKKKVRGALRSFKLASSGGLTLLTPQHLKDCCGVPGTFVLEALHKVVLAIAGGLIPEEVRPLICGARLVGLVKKDGRSLRPVASGDVLRRLAGRLLSKSVAPYARNFFLARKQVGVAVEGGADAAIIACRDVARTLPAGHVIFKVDQRNAFNAGSRAAILDLVARDFPTLYPYARMAY 2169          
BLAST of mRNA_A-nodosum_M_contig1016.4.1 vs. uniprot
Match: A0A433BTR1_9BURK (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Curvibacter sp. TaxID=1888168 RepID=A0A433BTR1_9BURK)

HSP 1 Score: 53.1 bits (126), Expect = 7.120e-5
Identity = 43/141 (30.50%), Postives = 61/141 (43.26%), Query Frame = 0
Query:   43 EDLAAFATLV--FTSRVLPHGFWTLKASANLCALGQKA----RPVACGDVLRRVIGAVFCSRYGRKLADYFQSWGPCGVAISGGVEIMGLTA---TLGFEEGYTTLSYDGANVFNSICHLRFLPALAEIVPLVVPYASNLY 174
            E L++ A LV   ++  +P         A L AL QKA    RP+ACGDV RR+   +      R+L+ +  S    GV    G E   L A        E    L  D  N FN+I    F+  ++  VP ++P+    Y
Sbjct:    8 EALSSIARLVGLVSAGAVPEAARPFVFGARLFAL-QKAGGGIRPIACGDVFRRIAARILAGNASRQLSPFLFSNRQVGVQAPCGAEAAQLAARRFAAAASEEDVVLKLDFKNAFNTIARQSFVEGVSSRVPALLPHVWAAY 147          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1016.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6P0N5L4_9CYAN9.920e-4946.41Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 Ta... [more]
A0A836CGN9_9STRA5.740e-1933.16Reverse transcriptase domain-containing protein n=... [more]
A0A226DV40_FOLCA2.250e-629.61Retrovirus-related Pol polyprotein from type-1 ret... [more]
A0A226F2H2_FOLCA1.080e-528.82Pickpocket protein 28 n=1 Tax=Folsomia candida Tax... [more]
A0A2E0Z6G4_9CHLR2.750e-525.70Reverse transcriptase domain-containing protein (F... [more]
A0A433BTR1_9BURK7.120e-530.50Reverse transcriptase domain-containing protein (F... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1016contigA-nodosum_M_contig1016:7243..7824 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1016.4.1mRNA_A-nodosum_M_contig1016.4.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1016 6323..7987 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1016.4.1 ID=prot_A-nodosum_M_contig1016.4.1|Name=mRNA_A-nodosum_M_contig1016.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=194bp
MENLFEEATVNAVIKKPNPQSAAGLSGLRYSHLQAALSDELVEDLAAFAT
LVFTSRVLPHGFWTLKASANLCALGQKARPVACGDVLRRVIGAVFCSRYG
RKLADYFQSWGPCGVAISGGVEIMGLTATLGFEEGYTTLSYDGANVFNSI
CHLRFLPALAEIVPLVVPYASNLYIREPPKLPVYIRWRRFGSS*
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