prot_A-nodosum_M_contig999.5.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig999.5.1
Unique Nameprot_A-nodosum_M_contig999.5.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length98
Homology
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BLAST of mRNA_A-nodosum_M_contig999.5.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 60.5 bits (145), Expect = 1.570e-8
Identity = 35/86 (40.70%), Postives = 53/86 (61.63%), Query Frame = 0 
Query:    8 RKPGRVPKLVQTWTGPWRVVSGGSEHVRVVEDIVTGETKEVHVVRMLPYADSPLVVGAEVREVFKMTKHQGEFEIADVI--SVGKD 91
            R   RV  L     G + +V+    HV  V++IV+GE ++VHV R+  YAD+ L + AE++EVF+    QGEFE+A ++  SV +D
Sbjct: 1584 RASARVGSLPDFVVGDYVIVAAERLHVYGVQNIVSGEVRDVHVARLRFYADAALEITAELKEVFQHAFTQGEFEMAAIVDMSVAED 1669
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig999.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K5A5_9PHAE1.570e-840.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig999contigA-nodosum_M_contig999:203275..203568 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig999.5.1mRNA_A-nodosum_M_contig999.5.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig999 203275..203568 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig999.5.1 ID=prot_A-nodosum_M_contig999.5.1|Name=mRNA_A-nodosum_M_contig999.5.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=98bp
YVLVARVRKPGRVPKLVQTWTGPWRVVSGGSEHVRVVEDIVTGETKEVHV
VRMLPYADSPLVVGAEVREVFKMTKHQGEFEIADVISVGKDPARVGEY
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