prot_A-nodosum_M_contig998.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig998.1.1
Unique Nameprot_A-nodosum_M_contig998.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length363
Homology
BLAST of mRNA_A-nodosum_M_contig998.1.1 vs. uniprot
Match: A0A6H5JLC2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLC2_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 1.490e-9
Identity = 94/300 (31.33%), Postives = 126/300 (42.00%), Query Frame = 0
Query:   65 RGLQTSCAEGDPFTVTSSVFPSLEGCVLYSGFVAADGNLVYNSSSXXXXXXXXXXXXTDGSAETFWGVYEILDDGSFDFHCVSNETSTTLSYPVEATWIC--DLDGDGQADFPTSSQFSTSCGCSTTTVSTTDIGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCAEGDLFTIISSVFPSLEGCVLYSGFVTTDGNLVYNSSSA---AIFSVSSSTTTTDGSAETFWGVFEILD-------DGSFDFHCVSNETSTALPFPVEATWICDVDGDGELEF-PTSSQFSTSCGCS 351
            R LQT CAEG   TVTSS+FP LEGC++    +   G + +   +             D  AE  W  Y      S    C+S E  T++ +P  ATW C  D   DG     T + F   CGC                   XXXXXXXXXXXX                SC+EG+ FT+  S  P  +GC L +GF  +D   VY  +     A   + S  T+ D   E +W +  + +       DG    +C S E +  +  P +ATW+C         F P  + F+  CGCS
Sbjct:   64 RRLQT-CAEGAGVTVTSSMFPLLEGCLVEMDLIEG-GEVEFVGETGVIASELNSD---DIDAEYIWVAY--YGTTSLAIACISLEPVTSV-HPSTATWYCVDDTTEDGIVA-ATDTTFGVDCGCD-----------------DXXXXXXXXXXXXPAPNVDSTTPAAPSGSSCSEGESFTVDISALPGADGCYLSTGFTLSD-EYVYTQTGGVGGAEMWIYSLPTSQDADPEIYWYLGYVPEITSSSEVDGEPTIYCGSFEQAGTV-HPADATWVCIFASSSTQTFGPDGASFT--CGCS 333          
BLAST of mRNA_A-nodosum_M_contig998.1.1 vs. uniprot
Match: D7G0B7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0B7_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 2.130e-9
Identity = 103/298 (34.56%), Postives = 137/298 (45.97%), Query Frame = 0
Query:   65 RGLQTSCAEGDPFTVTSSVFPSLEGCVLYSGFVAADGNLVYNSSSXXXXXXXXXXXXTDGSAETFWGVYEILDDGSFDFHCVSNETSTTLSYPVEATWIC--DLDGDGQADFPTSSQFSTSCGCSTTTVSTTDIGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCAEGDLFTIISSVFPSLEGCVLYSGFVTTDGNLVYNSSSA--AIFSVSSSTTTTDGSAETFWG---VFEILDDGSFD----FHCVSNETSTALPFPVEATWICDVDGDGELEFPTSSQFSTSCGCS 351
            R LQT CAEG   TVTSS+FP LEGC++ +  +   G   +   +             D  AE  W  Y    + S    C S E  T+ ++P  ATW C  D   DG     T + F   CGC                  XXXXXXXXXXXXXXXXXXXXXXXX     SC+EG+ FT+  S  P  +GC L +G+  +D ++   +     A   + S  ++ D  A  +W    V EI    +FD    ++C S E +  +  P +A W+C         F      S +CGCS
Sbjct:   64 RRLQT-CAEGSGVTVTSSMFPLLEGCLVETDLIEG-GEAEFVGETGMIAAVLNSD---DVDAEYIWAAYH--GETSLTIACFSLEPVTS-AHPSTATWYCVDDTTEDGIVA-ATDTTFGVDCGCD-----------------XXXXXXXXXXXXXXXXXXXXXXXXAPSGSSCSEGESFTVDISALPEADGCYLSTGYTLSDEHVYTQTGGVGGAEMWIHSLPSSDDDDAVIYWYLAYVPEITSSSAFDGELAYYCGSFEPADTV-HPADANWVCTFASSSTQTFGADGA-SFTCGCS 333          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig998.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JLC2_9PHAE1.490e-931.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0B7_ECTSI2.130e-934.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig998contigA-nodosum_M_contig998:32145..34655 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig998.1.1mRNA_A-nodosum_M_contig998.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig998 32145..34657 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig998.1.1 ID=prot_A-nodosum_M_contig998.1.1|Name=mRNA_A-nodosum_M_contig998.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=363bp
GSPQSTRESIAGNPRAVDGSTTMERLGLFEEPVMLPITTIPKQEGIPPLL
YEEGWNGAEGKRSRRGLQTSCAEGDPFTVTSSVFPSLEGCVLYSGFVAAD
GNLVYNSSSAAIISVSSSTTTTDGSAETFWGVYEILDDGSFDFHCVSNET
STTLSYPVEATWICDLDGDGQADFPTSSQFSTSCGCSTTTVSTTDIGTET
TTTTDIGTETTTTTDIGTETTTTTDIGTETTTTSCAEGDLFTIISSVFPS
LEGCVLYSGFVTTDGNLVYNSSSAAIFSVSSSTTTTDGSAETFWGVFEIL
DDGSFDFHCVSNETSTALPFPVEATWICDVDGDGELEFPTSSQFSTSCGC
STTTVSTTDIGTE
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