prot_A-nodosum_M_contig997.3.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig997.3.1
Unique Nameprot_A-nodosum_M_contig997.3.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length156
Homology
BLAST of mRNA_A-nodosum_M_contig997.3.1 vs. uniprot
Match: D8LDW7_ECTSI (Endo-1,3-beta-glucanase, family GH17 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDW7_ECTSI)

HSP 1 Score: 216 bits (550), Expect = 2.200e-67
Identity = 101/159 (63.52%), Postives = 127/159 (79.87%), Query Frame = 0
Query:    1 MLTVDNWEHWINRHLRPIVRRIRRCKVFKEIFLAVGNESLSPWQVERFGARLVPCLREVHAALVETRLADRVKLVTPLGMSVLCSSYPPSAGQISEAYVDVVRDVVRLLVRIGSPFCINIHPFFARGEGSRDFLLFGPDPGYLD----CGKRYNNMFSA 155
            ML+V +W  W+  HL P+V  +R  +V KEIFLAVGNE+L+PW VE FG RLVPC++EV+ AL++T L+DRVKLVTPL MS+L +SYPPSAGQ++EA+++VV +VVR LVRIGSPFCIN++PFFAR   SRDF+LFGPD GY D    C  RY NMF+A
Sbjct:   69 MLSVSDWRAWVETHLSPVVGGLRGQRVHKEIFLAVGNEALAPWHVEMFGRRLVPCMKEVYTALLQTGLSDRVKLVTPLEMSILGASYPPSAGQVAEAHLEVVSEVVRFLVRIGSPFCINVYPFFAREHASRDFVLFGPDEGYTDGEGGC-LRYTNMFNA 226          
BLAST of mRNA_A-nodosum_M_contig997.3.1 vs. uniprot
Match: B8LRW3_PICSI (Uncharacterized protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=B8LRW3_PICSI)

HSP 1 Score: 93.6 bits (231), Expect = 1.510e-19
Identity = 54/152 (35.53%), Postives = 84/152 (55.26%), Query Frame = 0
Query:   10 WINRHLRPIVRRIRRCKVFKEIFLAVGNESLSPWQVERFGARLVPCLREVHAALVETRLADRVKLVTPLGMSVLCSSYPPSAGQISEAYVDVVRDVVRLLVRIGSPFCINIHPFFAR----GEGSRDFLLFGPDPGYLDCGK--RYNNMFSA 155
            W+N ++R  +         K I +AVGNE  +    +   A LVP ++ +H+ALV       +++ TP  ++VL +SYPPSAG        +++ ++  L +IGSPF INI+P+FA      + S D++LF P+ G +D     RYNNM  A
Sbjct:  109 WVNENIRTYL------PATKIIGIAVGNEVYTGTDTQLM-ANLVPAMKNIHSALVSIGADMNIQITTPHSLAVLGNSYPPSAGSFVSDLNSLMKPLLDFLSQIGSPFFINIYPYFAYKSNPSQVSLDYVLFQPNAGVIDPNNNIRYNNMLYA 253          
BLAST of mRNA_A-nodosum_M_contig997.3.1 vs. uniprot
Match: A0A5K1GLM5_9MAGN (Uncharacterized protein (Fragment) n=4 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K1GLM5_9MAGN)

HSP 1 Score: 87.8 bits (216), Expect = 1.010e-17
Identity = 53/133 (39.85%), Postives = 74/133 (55.64%), Query Frame = 0
Query:   31 IFLAVGNESLSPWQVERFGARLVPCLREVHAALVETRLADRVKLVTPLGMSVLCSSYPPSAGQISEAY--VDVVRDVVRLLVRIGSPFCINIHPFFARGEGSRD----FLLFGPDPGYLDCGKR--YNNMFSA 155
            + ++VGNE LS +      + LVP ++ +HAAL+E  LAD++K+ T   M+VL  S PPS G     Y  VDV++ +V  L + GSP  IN +P+FA G   R     F LF  + G  D   +  Y NMF A
Sbjct:   91 VLVSVGNEVLS-YGDGNMVSHLVPAMQNLHAALLEVSLADKIKVTTVHSMAVLQQSDPPSTGAFRPTYAGVDVMKQLVAFLQQTGSPLAINPYPYFAYGSDPRPETLAFCLFQQNQGRFDPNTKITYYNMFDA 222          
BLAST of mRNA_A-nodosum_M_contig997.3.1 vs. uniprot
Match: A0A388KLI1_CHABU (CCHC-type domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KLI1_CHABU)

HSP 1 Score: 88.6 bits (218), Expect = 1.650e-17
Identity = 44/127 (34.65%), Postives = 73/127 (57.48%), Query Frame = 0
Query:   33 LAVGNESLSPWQVERFGARLVPCLREVHAALVETRLADRVKLVTPLGMSVLCSSYPPSAGQISEAYVDVVRDVVRLLVRIGSPFCINIHPFFARGEGSRDFLL---FGPDPGYLDC----GKRYNNM 152
            +A+GNE L P     + A +VP +  VH AL E  L   +K+VTPL  + L ++YPPSAG  +++Y++ ++ +++ L   GSPF +NI+PF+   + + +F++    G     +D     G  Y NM
Sbjct:  594 IAIGNEVLLPEHGTTYWATIVPAMVNVHKALQEFGLDQTIKVVTPLNFNCLRATYPPSAGLFNQSYINTIKPLLQFLNETGSPFMVNIYPFYPTRDPTNNFMVDFVLGVPGSRIDTDPVTGLSYTNM 720          
BLAST of mRNA_A-nodosum_M_contig997.3.1 vs. uniprot
Match: UPI0009E2E34B (glucan endo-1,3-beta-glucosidase 11-like n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E2E34B)

HSP 1 Score: 85.9 bits (211), Expect = 9.950e-17
Identity = 51/152 (33.55%), Postives = 80/152 (52.63%), Query Frame = 0
Query:   10 WINRHLRPIVRRIRRCKVFKEIFLAVGNESLSPWQVERFGARLVPCLREVHAALVETRLADRVKLVTPLGMSVLCSSYPPSAGQISEAYVDVVRDVVRLLVRIGSPFCINIHPFFA-RGEGSR---DFLLFGPDPGYLDCGK--RYNNMFSA 155
            W+  +L+  + R +   V       +GNE LS        + L+P ++ VH+ALV   L  +V + T   +++L +SYPPSAG+     +  +  ++  L + GSPF IN +PFFA + +  R   D++LF P  G +D G   RY NM  A
Sbjct:  105 WVKSNLQTHIPRTKITAV------TIGNEILSSNNTLLIQS-LIPAIQSVHSALVTLNLDRQVAVTTAHSLTILSTSYPPSAGRFRRDLLPYISPLINFLNKTGSPFLINAYPFFAYKADPKRVSLDYVLFQPSAGVVDSGTGLRYRNMLHA 249          
BLAST of mRNA_A-nodosum_M_contig997.3.1 vs. uniprot
Match: A0A2I0VJK2_9ASPA (Glucan endo-1,3-beta-glucosidase 11 n=2 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0VJK2_9ASPA)

HSP 1 Score: 85.1 bits (209), Expect = 1.710e-16
Identity = 51/152 (33.55%), Postives = 79/152 (51.97%), Query Frame = 0
Query:   10 WINRHLRPIVRRIRRCKVFKEIFLAVGNESLSPWQVERFGARLVPCLREVHAALVETRLADRVKLVTPLGMSVLCSSYPPSAGQISEAYVDVVRDVVRLLVRIGSPFCINIHPFFA-RGEGSR---DFLLFGPDPGYLDCGK--RYNNMFSA 155
            W+  +L+P + R +   V       +GNE LS        + L+P ++ VH+ALV   L  +V + T   +++L +SYPPSAG      +  +  ++  L +  SPF IN +PFFA + +  R   D++LF P  G +D G   RY NM  A
Sbjct:  101 WVKTNLQPHIPRTKITAV------TIGNEILSGNNTLLIQS-LIPAIQSVHSALVSLNLDRQVAVTTAHSLTILSTSYPPSAGAFRRDLLPYISPLINFLNKTRSPFLINAYPFFAYKADPKRVSLDYVLFEPSAGVVDSGTGLRYRNMLHA 245          
BLAST of mRNA_A-nodosum_M_contig997.3.1 vs. uniprot
Match: A0A1J3J0J4_NOCCA (Glucan endo-1,3-beta-D-glucosidase (Fragment) n=5 Tax=Coluteocarpeae TaxID=1394505 RepID=A0A1J3J0J4_NOCCA)

HSP 1 Score: 85.1 bits (209), Expect = 2.280e-16
Identity = 51/153 (33.33%), Postives = 81/153 (52.94%), Query Frame = 0
Query:   10 WINRHLRPIVRRIR-RCKVFKEIFLAVGNESLSPWQVERFGARLVPCLREVHAALVETRLADRVKLVTPLGMSVLCSSYPPSAGQISEAYVDVVRDVVRLLVRIGSPFCINIHPFFA-RGEGSR---DFLLFGPDPGYLD--CGKRYNNMFSA 155
            WI +++ P +      C       LA+ + SL+        A L+P ++ VH+ALV   L+DRV + T   +S+L +S+PPSAG+     +D ++ ++    +  SPF IN +PFFA +G       DF+LF  + G +D   G  Y+NM  A
Sbjct:  157 WIKQNVTPFLPATNITCITIGNEILALNDSSLT--------ANLLPAMQGVHSALVTAGLSDRVAVTTAHSLSILQTSFPPSAGEFRPDLIDCLKPILEFHRKTDSPFLINAYPFFAYKGSPKEIPLDFVLFQANQGIVDPATGLHYDNMLFA 301          
BLAST of mRNA_A-nodosum_M_contig997.3.1 vs. uniprot
Match: V4MPH2_EUTSA (Glucan endo-1,3-beta-D-glucosidase n=2 Tax=Eutrema salsugineum TaxID=72664 RepID=V4MPH2_EUTSA)

HSP 1 Score: 84.3 bits (207), Expect = 3.750e-16
Identity = 48/150 (32.00%), Postives = 80/150 (53.33%), Query Frame = 0
Query:   10 WINRHLRPIVRRIR-RCKVFKEIFLAVGNESLSPWQVERFGARLVPCLREVHAALVETRLADRVKLVTPLGMSVLCSSYPPSAGQISEAYVDVVRDVVRLLVRIGSPFCINIHPFFA-RGEGSR---DFLLFGPDPGYLD--CGKRYNNM 152
            WI +++ P +      C       LA+ + SL+          L+P ++ VH+AL+   L+D++ + T   +S+L +S+PPSAG+     +D ++ ++    +  SPF IN +PFFA +G       DF+LF P+ G +D   G RY NM
Sbjct:  100 WIKQNVTPFLPATNITCITIGNEILALNDSSLAD--------NLLPAMQGVHSALITAGLSDQIAVTTAHSLSILQTSFPPSAGEFHPDLIDTLKPILEFHRKTDSPFLINAYPFFAYKGNPKEIPLDFVLFQPNQGIVDPATGFRYENM 241          
BLAST of mRNA_A-nodosum_M_contig997.3.1 vs. uniprot
Match: A0A2I0AC38_9ASPA (Glucan endo-1,3-beta-glucosidase 11 n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0AC38_9ASPA)

HSP 1 Score: 84.0 bits (206), Expect = 4.220e-16
Identity = 51/152 (33.55%), Postives = 77/152 (50.66%), Query Frame = 0
Query:   10 WINRHLRPIVRRIRRCKVFKEIFLAVGNESLSPWQVERFGARLVPCLREVHAALVETRLADRVKLVTPLGMSVLCSSYPPSAGQISEAYVDVVRDVVRLLVRIGSPFCINIHPFFA-RGEGSR---DFLLFGPDPGYLD--CGKRYNNMFSA 155
            WI  +++P + R +   +       VGNE L+          L+P ++ VH AL    L  R+ + T   ++VL SSYPPSAG      +  +  ++  L +  SPF IN +PFFA + +  R   D++LF P+ G +D   G RY NM  A
Sbjct:   97 WIRSNIKPYLLRTKISAI------TVGNEVLTS-NDSALIQNLLPAMKSVHYALASVGLDRRIAVTTAHSLTVLSSSYPPSAGAFQPGLLTYICPLIHFLNKTRSPFLINAYPFFAYKADPKRVSLDYVLFRPNAGVVDNSTGLRYGNMLHA 241          
BLAST of mRNA_A-nodosum_M_contig997.3.1 vs. uniprot
Match: E1311_ARATH (Glucan endo-1,3-beta-glucosidase 11 n=6 Tax=Arabidopsis TaxID=3701 RepID=E1311_ARATH)

HSP 1 Score: 84.0 bits (206), Expect = 4.950e-16
Identity = 50/153 (32.68%), Postives = 81/153 (52.94%), Query Frame = 0
Query:   10 WINRHLRPIVRRIR-RCKVFKEIFLAVGNESLSPWQVERFGARLVPCLREVHAALVETRLADRVKLVTPLGMSVLCSSYPPSAGQISEAYVDVVRDVVRLLVRIGSPFCINIHPFFA-RG---EGSRDFLLFGPDPGYLD--CGKRYNNMFSA 155
            WI +++ P +      C       LA+ + SL+          L+P ++ VH+AL+   L+D++ + T   +S+L SS+PPSAG+     +D +  ++    +  SPF IN +PFFA +G   E   DF+LF P+ G +D   G  Y+NM  A
Sbjct:   99 WIKQNVTPFLPATNITCITIGNEILALNDSSLT--------TNLLPAMQGVHSALITAGLSDQISVTTAHSLSILKSSFPPSAGEFQPDLLDSLTPILEFHRKTDSPFLINAYPFFAYKGNPKEVPLDFVLFQPNQGIVDPATGFHYDNMLFA 243          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig997.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDW7_ECTSI2.200e-6763.52Endo-1,3-beta-glucanase, family GH17 n=2 Tax=Ectoc... [more]
B8LRW3_PICSI1.510e-1935.53Uncharacterized protein n=1 Tax=Picea sitchensis T... [more]
A0A5K1GLM5_9MAGN1.010e-1739.85Uncharacterized protein (Fragment) n=4 Tax=Nymphae... [more]
A0A388KLI1_CHABU1.650e-1734.65CCHC-type domain-containing protein n=1 Tax=Chara ... [more]
UPI0009E2E34B9.950e-1733.55glucan endo-1,3-beta-glucosidase 11-like n=1 Tax=P... [more]
A0A2I0VJK2_9ASPA1.710e-1633.55Glucan endo-1,3-beta-glucosidase 11 n=2 Tax=Dendro... [more]
A0A1J3J0J4_NOCCA2.280e-1633.33Glucan endo-1,3-beta-D-glucosidase (Fragment) n=5 ... [more]
V4MPH2_EUTSA3.750e-1632.00Glucan endo-1,3-beta-D-glucosidase n=2 Tax=Eutrema... [more]
A0A2I0AC38_9ASPA4.220e-1633.55Glucan endo-1,3-beta-glucosidase 11 n=1 Tax=Aposta... [more]
E1311_ARATH4.950e-1632.68Glucan endo-1,3-beta-glucosidase 11 n=6 Tax=Arabid... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000490Glycoside hydrolase family 17PFAMPF00332Glyco_hydro_17coord: 29..154
e-value: 9.3E-16
score: 58.3
NoneNo IPR availableGENE3D3.20.20.80Glycosidasescoord: 3..155
e-value: 2.6E-26
score: 94.3
NoneNo IPR availablePANTHERPTHR32227:SF62O-GLYCOSYL HYDROLASES FAMILY 17 PROTEINcoord: 8..155
IPR044965Glycoside hydrolase family 17, plantPANTHERPTHR32227GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATEDcoord: 8..155
IPR017853Glycoside hydrolase superfamilySUPERFAMILY51445(Trans)glycosidasescoord: 9..154

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig997contigA-nodosum_M_contig997:31031..31498 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig997.3.1mRNA_A-nodosum_M_contig997.3.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig997 24815..32960 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig997.3.1 ID=prot_A-nodosum_M_contig997.3.1|Name=mRNA_A-nodosum_M_contig997.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=156bp
MLTVDNWEHWINRHLRPIVRRIRRCKVFKEIFLAVGNESLSPWQVERFGA
RLVPCLREVHAALVETRLADRVKLVTPLGMSVLCSSYPPSAGQISEAYVD
VVRDVVRLLVRIGSPFCINIHPFFARGEGSRDFLLFGPDPGYLDCGKRYN
NMFSA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000490Glyco_hydro_17
IPR044965Glyco_hydro_17_plant
IPR017853Glycoside_hydrolase_SF