mRNA_A-nodosum_M_contig9600.7.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig9600.7.1 vs. uniprot
Match: A0A6H5K9K1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9K1_9PHAE) HSP 1 Score: 214 bits (545), Expect = 7.380e-65 Identity = 110/161 (68.32%), Postives = 131/161 (81.37%), Query Frame = 1
Query: 4 IDELLAFRTQNAKKAVHSFCPL---GGVGGTADSPG------------VPRRLWQRLALAAGVTAGEKWAEVAKAKLVALAQQLTVCEFEVVGKGSFKEEFVTCGGVSLSELDMRTMESRGVPGLYFAGEVVDIDGVTGGYNFQSAWTTGWVAGSAIGARA 441
+D+L AFRT+NAKK V++FCP+ G +G + S G +PRRLWQ LALAAGV AG+KWA+++KAKL ALAQQLT CEF++VGKGSFKEEFVTCGGV+LS LDMRTMES+ V GL+FAGEVVD+DGVTGG+NFQSAWTTGWVAGSAIG+ A
Sbjct: 319 LDDLQAFRTRNAKKTVYAFCPVVGSGALGSSVSSGGRPQSPQPPSISSLPRRLWQSLALAAGVAAGDKWADLSKAKLSALAQQLTACEFQIVGKGSFKEEFVTCGGVALSALDMRTMESKTVAGLHFAGEVVDVDGVTGGFNFQSAWTTGWVAGSAIGSAA 479
BLAST of mRNA_A-nodosum_M_contig9600.7.1 vs. uniprot
Match: D8FTQ1_9CYAN (Uncharacterized protein n=1 Tax=Kamptonema sp. PCC 6506 TaxID=272129 RepID=D8FTQ1_9CYAN) HSP 1 Score: 157 bits (397), Expect = 7.950e-47 Identity = 75/141 (53.19%), Postives = 105/141 (74.47%), Query Frame = 1
Query: 10 ELLAFRTQNAKKAVHSFCPLGGVGGTADSPGVPRRLWQRLALAAGVTAGEKWAEVAKAKLVALAQQLTVCEFEVVGKGSFKEEFVTCGGVSLSELDMRTMESRGVPGLYFAGEVVDIDGVTGGYNFQSAWTTGWVAGSAIG 432
+LLA ++Q ++A+ + CPL +PRRLW+ L +A G+ + ++W+E++ L L Q+L+ E+++ GKG+FKEEFVTCGGV+L E+D +TMESR PGLYFAGE++DIDGVTGG+NFQSAWTT W+AG AIG
Sbjct: 4 QLLAVKSQLPRRAIATSCPLP----------IPRRLWEHLTVAVGIDSEKRWSELSNKSLNQLIQELSQGEYKIKGKGAFKEEFVTCGGVNLKEVDFKTMESRCCPGLYFAGEILDIDGVTGGFNFQSAWTTAWLAGQAIG 134
BLAST of mRNA_A-nodosum_M_contig9600.7.1 vs. uniprot
Match: A0A835ZA93_9STRA (HI0933 family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA93_9STRA) HSP 1 Score: 163 bits (412), Expect = 3.080e-45 Identity = 79/139 (56.83%), Postives = 101/139 (72.66%), Query Frame = 1
Query: 25 RTQNAKKAVHSFCPLGGVGGTADSPGVPRRLWQRLALAAGVTAGEKWAEVAKAKLVALAQQLTVCEFEVVGKGSFKEEFVTCGGVSLSELDMRTMESRGVPGLYFAGEVVDIDGVTGGYNFQSAWTTGWVAGSAIGARA 441
RT +A++ V ++CPL + VP+RLW+ L AG+ E+W + AKL ALA+ C+ VVGKG+FK+EFVTCGGV+L LDM+TMESR VPGL+FAGE+VD+DG+TGGYNFQSAWTT W AG AIG+ A
Sbjct: 344 RTASARREVATYCPL-------EQASVPKRLWKALVQHAGIGDNEQWGGCSNAKLAALARNAAACDLSVVGKGAFKDEFVTCGGVALENLDMKTMESRTVPGLHFAGEIVDVDGITGGYNFQSAWTTSWCAGHAIGSSA 475
BLAST of mRNA_A-nodosum_M_contig9600.7.1 vs. uniprot
Match: UPI001F46DD27 (NAD(P)/FAD-dependent oxidoreductase n=1 Tax=Leptodesmis sichuanensis TaxID=2906798 RepID=UPI001F46DD27) HSP 1 Score: 158 bits (400), Expect = 4.660e-44 Identity = 77/141 (54.61%), Postives = 103/141 (73.05%), Query Frame = 1
Query: 10 ELLAFRTQNAKKAVHSFCPLGGVGGTADSPGVPRRLWQRLALAAGVTAGEKWAEVAKAKLVALAQQLTVCEFEVVGKGSFKEEFVTCGGVSLSELDMRTMESRGVPGLYFAGEVVDIDGVTGGYNFQSAWTTGWVAGSAIG 432
+++A R+Q AKK++ + CP+ +PRRLW+RL A G+ G++WAE++ L L Q+LT +F + GKG+FKEEFVTCGGV L E+D +TM+SR PGLY AGE++DIDGVTGG+NFQSAWTT W+AG AIG
Sbjct: 280 QVVAVRSQLAKKSIVANCPIP----------IPRRLWERLTAAVGIAPGDRWAELSNKALNQLLQELTQGQFLIRGKGAFKEEFVTCGGVRLQEVDFKTMQSRQCPGLYLAGEILDIDGVTGGFNFQSAWTTAWLAGQAIG 410
BLAST of mRNA_A-nodosum_M_contig9600.7.1 vs. uniprot
Match: A0A8J7JAB2_9CYAN (NAD(P)/FAD-dependent oxidoreductase n=1 Tax=Lusitaniella coriacea LEGE 07157 TaxID=945747 RepID=A0A8J7JAB2_9CYAN) HSP 1 Score: 158 bits (399), Expect = 5.810e-44 Identity = 78/141 (55.32%), Postives = 101/141 (71.63%), Query Frame = 1
Query: 10 ELLAFRTQNAKKAVHSFCPLGGVGGTADSPGVPRRLWQRLALAAGVTAGEKWAEVAKAKLVALAQQLTVCEFEVVGKGSFKEEFVTCGGVSLSELDMRTMESRGVPGLYFAGEVVDIDGVTGGYNFQSAWTTGWVAGSAIG 432
ELLA +++ K+ + + CPL +P+RLWQRL AG+ WAE++K L AL +LT ++E+ GKG FKEEFVTCGG+ L E+D +TMESR PGLYFAGE++DIDGVTGG+NFQSAWTTGW+AG A+G
Sbjct: 275 ELLAIKSRTPKRQISTNCPLP----------IPKRLWQRLVEIAGIERQTPWAELSKKGLNALVGELTQGKYEIQGKGVFKEEFVTCGGIKLQEVDFKTMESRKCPGLYFAGEILDIDGVTGGFNFQSAWTTGWLAGQAMG 405
BLAST of mRNA_A-nodosum_M_contig9600.7.1 vs. uniprot
Match: UPI0019AD10DA (NAD(P)/FAD-dependent oxidoreductase n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=UPI0019AD10DA) HSP 1 Score: 158 bits (399), Expect = 5.930e-44 Identity = 78/143 (54.55%), Postives = 105/143 (73.43%), Query Frame = 1
Query: 10 ELLAFRTQNAKKAVHSFCPLGGVGGTADSPGVPRRLWQRLALAAGVTAGEKWAEVAKAKLVALAQQLTVCEFEVVGKGSFKEEFVTCGGVSLSELDMRTMESRGVPGLYFAGEVVDIDGVTGGYNFQSAWTTGWVAGSAIGAR 438
+LLA + Q ++A+ + CP+ +PRRLW+RL G+TA +WAE++ L L Q+LT ++ V GKG+FKEEFVTCGG+SL E+D +TMESR PGL+FAGE++DIDGVTGG+NFQSAWTTGW+AG A+G+R
Sbjct: 279 QLLAVKAQLPRRAIATSCPVL----------IPRRLWERLTNHVGITAETRWAELSNKTLNLLLQELTRGQYTVNGKGAFKEEFVTCGGISLKEVDFKTMESRLCPGLHFAGEILDIDGVTGGFNFQSAWTTGWIAGQAMGSR 411
BLAST of mRNA_A-nodosum_M_contig9600.7.1 vs. uniprot
Match: UPI0019AC7E13 (NAD(P)/FAD-dependent oxidoreductase n=1 Tax=Leptolyngbyaceae cyanobacterium LF-bin-369 TaxID=2804781 RepID=UPI0019AC7E13) HSP 1 Score: 157 bits (398), Expect = 9.770e-44 Identity = 79/141 (56.03%), Postives = 102/141 (72.34%), Query Frame = 1
Query: 10 ELLAFRTQNAKKAVHSFCPLGGVGGTADSPGVPRRLWQRLALAAGVTAGEKWAEVAKAKLVALAQQLTVCEFEVVGKGSFKEEFVTCGGVSLSELDMRTMESRGVPGLYFAGEVVDIDGVTGGYNFQSAWTTGWVAGSAIG 432
EL+ +TQ AKK+V CP+ +PRRLW+ L AAG+ + +W++V+K L AL ++L E+ + GKG FK+EFVTCGGV L E+D +TMESR PGLYFAGEV+DIDGVTGG+NFQSAW+TGW+AG AIG
Sbjct: 286 ELMKVKTQLAKKSVGPNCPVI----------LPRRLWESLIAAAGIPSELRWSDVSKVMLTALLKELLQGEYAITGKGVFKDEFVTCGGVDLKEVDFKTMESRTCPGLYFAGEVLDIDGVTGGFNFQSAWSTGWIAGQAIG 416
BLAST of mRNA_A-nodosum_M_contig9600.7.1 vs. uniprot
Match: K9YSC3_DACSA (Flavoprotein, HI0933 family n=2 Tax=Cyanobacteria TaxID=1117 RepID=K9YSC3_DACSA) HSP 1 Score: 157 bits (397), Expect = 1.060e-43 Identity = 73/140 (52.14%), Postives = 107/140 (76.43%), Query Frame = 1
Query: 10 ELLAFRTQNAKKAVHSFCPLGGVGGTADSPGVPRRLWQRLALAAGVTAGEKWAEVAKAKLVALAQQLTVCEFEVVGKGSFKEEFVTCGGVSLSELDMRTMESRGVPGLYFAGEVVDIDGVTGGYNFQSAWTTGWVAGSAI 429
+L+A + Q ++ V SF P+ +PRRLW++LALA+G++A ++WAEV+K +++ LA +L + +++ GKG FKEEFVTCGGV L E++ +TMES+ V GLYFAGE++DIDG+TGG+NFQ+AWTTGW+AG+ I
Sbjct: 274 QLMAQKEQTPRRQVVSFSPVS----------IPRRLWEKLALASGISATQRWAEVSKKQIITLANELIMGNYQIQGKGVFKEEFVTCGGVDLKEVNFKTMESKLVAGLYFAGEILDIDGITGGFNFQNAWTTGWLAGNGI 403
BLAST of mRNA_A-nodosum_M_contig9600.7.1 vs. uniprot
Match: K9WJR4_9CYAN (Flavoprotein, HI0933 family n=5 Tax=Oscillatoriales TaxID=1150 RepID=K9WJR4_9CYAN) HSP 1 Score: 157 bits (398), Expect = 1.210e-43 Identity = 79/142 (55.63%), Postives = 103/142 (72.54%), Query Frame = 1
Query: 13 LLAFRTQNAKKAVHSFCPLGGVGGTADSPGVPRRLWQRLALAAGVTAGEKWAEVAKAKLVALAQQLTVCEFEVVGKGSFKEEFVTCGGVSLSELDMRTMESRGVPGLYFAGEVVDIDGVTGGYNFQSAWTTGWVAGSAIGAR 438
LLA ++Q ++ V + CP+ +P+RLW+ L + G+ A E+WAEV+K L L Q+L ++ + GKG FKEEFVTCGGVSL E+D +TMESR VPGLYFAGE++DIDGVTGG+NFQSAWTTGW+AG A+G R
Sbjct: 298 LLAVKSQLPRRQVTTSCPVP----------IPKRLWESLVASVGIGAEERWAEVSKKALNQLIQELIQGQYSIKGKGIFKEEFVTCGGVSLKEVDFKTMESRLVPGLYFAGEILDIDGVTGGFNFQSAWTTGWLAGQAMGNR 429
BLAST of mRNA_A-nodosum_M_contig9600.7.1 vs. uniprot
Match: A0A0F5YCR6_9CYAN (Flavoprotein n=1 Tax=Limnoraphis robusta CS-951 TaxID=1637645 RepID=A0A0F5YCR6_9CYAN) HSP 1 Score: 157 bits (398), Expect = 1.330e-43 Identity = 78/142 (54.93%), Postives = 104/142 (73.24%), Query Frame = 1
Query: 7 DELLAFRTQNAKKAVHSFCPLGGVGGTADSPGVPRRLWQRLALAAGVTAGEKWAEVAKAKLVALAQQLTVCEFEVVGKGSFKEEFVTCGGVSLSELDMRTMESRGVPGLYFAGEVVDIDGVTGGYNFQSAWTTGWVAGSAIG 432
+ELLA ++Q +++ V S CP+ +PRRLW++L LA G+ ++W EV+ + L Q+LT +F++ GKG FKEEFVTCGGVSL E+D +TMESR P LYFAGE++DIDGVTGG+NFQSAWTTGW+AG A+G
Sbjct: 302 EELLAVKSQLSQRVVSSSCPVL----------IPRRLWKQLTLAVGIDEQKRWGEVSNKVINQLIQELTQGKFQINGKGVFKEEFVTCGGVSLKEVDFKTMESRCCPNLYFAGEILDIDGVTGGFNFQSAWTTGWLAGQAMG 433 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9600.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig9600.7.1 >prot_A-nodosum_M_contig9600.7.1 ID=prot_A-nodosum_M_contig9600.7.1|Name=mRNA_A-nodosum_M_contig9600.7.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=148bp AIDELLAFRTQNAKKAVHSFCPLGGVGGTADSPGVPRRLWQRLALAAGVTback to top mRNA from alignment at A-nodosum_M_contig9600:11246..12120+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig9600.7.1 ID=mRNA_A-nodosum_M_contig9600.7.1|Name=mRNA_A-nodosum_M_contig9600.7.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=875bp|location=Sequence derived from alignment at A-nodosum_M_contig9600:11246..12120+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig9600:11246..12120+ >mRNA_A-nodosum_M_contig9600.7.1 ID=mRNA_A-nodosum_M_contig9600.7.1|Name=mRNA_A-nodosum_M_contig9600.7.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=444bp|location=Sequence derived from alignment at A-nodosum_M_contig9600:11246..12120+ (Ascophyllum nodosum dioecious)back to top |