mRNA_A-nodosum_M_contig9600.5.2 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig9600.5.2 vs. uniprot
Match: A0A835ZA93_9STRA (HI0933 family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA93_9STRA) HSP 1 Score: 135 bits (341), Expect = 1.450e-35 Identity = 74/163 (45.40%), Postives = 88/163 (53.99%), Query Frame = 1
Query: 4 IAQGCPRGSKQLIGPFSSLFGPADAAAWFRERGVALKTEGDGRMFPQSDDSQTIIDCLQ-------------------------------------------------------GKRIYAISCDYVLQATGAARGGHVWAKQLGHAVSPAVPSLFTLTVKDPR 327
IAQG PRGS+QL+GP S+ FGP DAAAWFRERGV LKTE DGRMFP +D SQT+IDCL G Y +S D+VL ATG++R G+ WA+QLGH +SP VPSLFT T++DPR
Sbjct: 59 IAQGYPRGSRQLLGPLSAAFGPRDAAAWFRERGVNLKTEADGRMFPVTDSSQTVIDCLAAAARAAGVRCASTSPLIALARESHPESATMGFEIDVVSGSSGAPLQHAALAPPRGGGSGYTLSADFVLLATGSSREGYKWAEQLGHTISPPVPSLFTFTIRDPR 221
BLAST of mRNA_A-nodosum_M_contig9600.5.2 vs. uniprot
Match: A0A6H5K9K1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9K1_9PHAE) HSP 1 Score: 132 bits (333), Expect = 2.140e-34 Identity = 80/176 (45.45%), Postives = 90/176 (51.14%), Query Frame = 1
Query: 1 LIAQGCPRGSKQLIGPFSSLFGPADAAAWFRERGVALKTEGDGRMFPQSDDSQTIIDCLQG-------------------------------------------------------------KRIYAISCDYVL------QATGAARGGHVWAKQLGHAVSPAVPSLFTLTVKDPR 327
LIA+G PRGSKQLIGPF SLFGP DAAAWF RGV LKTEGDGRMFP +DDSQTIIDCL+ ++ +S + ATGAAR GH WAK+LGHAVSP VPSLFTLT++DPR
Sbjct: 6 LIAKGYPRGSKQLIGPFKSLFGPDDAAAWFGSRGVTLKTEGDGRMFPVTDDSQTIIDCLEEAARKASVEVVTSARVTSVLRAEPAEAGNATDGADGVEAQPQQQPPRFELEFATATPLPPAVRKALGVSAAGIAIAGEGSGATGAAREGHGWAKKLGHAVSPPVPSLFTLTIRDPR 181
BLAST of mRNA_A-nodosum_M_contig9600.5.2 vs. uniprot
Match: UPI001881E821 (NAD(P)/FAD-dependent oxidoreductase n=1 Tax=Leptolyngbya cf. ectocarpi LEGE 11479 TaxID=1828722 RepID=UPI001881E821) HSP 1 Score: 110 bits (275), Expect = 1.680e-26 Identity = 61/134 (45.52%), Postives = 74/134 (55.22%), Query Frame = 1
Query: 4 IAQGCPRGSKQLIGPFSSLFGPADAAAWFRERGVALKTEGDGRMFPQSDDSQTIIDCLQGKRIYA----------------------------ISCDYVLQATGAARGGHVWAKQLGHAVSPAVPSLFTLTVKD 321
+ Q PRG K L GPFS F P D AW+++RGV LKTE DGRMFP +DDS TI+DCL+ I A + CD +L ATG++ GH A+ LGH + P VPSLFT TVKD
Sbjct: 64 LVQHYPRGGKALRGPFSR-FQPQDTIAWYQQRGVKLKTEADGRMFPVTDDSDTIVDCLRKAAIKAGVTIKTRSPVRSVNKTDSGFGLGFKDGDVRCDRILLATGSSPQGHRIARSLGHTIEPPVPSLFTFTVKD 196
BLAST of mRNA_A-nodosum_M_contig9600.5.2 vs. uniprot
Match: U9VMR9_9CYAN (Hi0933 family n=1 Tax=Leptolyngbya sp. Heron Island J TaxID=1385935 RepID=U9VMR9_9CYAN) HSP 1 Score: 110 bits (275), Expect = 1.830e-26 Identity = 62/134 (46.27%), Postives = 74/134 (55.22%), Query Frame = 1
Query: 4 IAQGCPRGSKQLIGPFSSLFGPADAAAWFRERGVALKTEGDGRMFPQSDDSQTIIDCLQGKRIYA----------------------------ISCDYVLQATGAARGGHVWAKQLGHAVSPAVPSLFTLTVKD 321
+ Q PRGSK L G FS F P D AW+++RGV LKTE DGRMFP +DDS TIIDCL + A +SCD +L ATG++ GH AK LGH + P VPSLFT T+KD
Sbjct: 67 LVQNYPRGSKALRGAFSR-FQPKDTIAWYQQRGVKLKTEADGRMFPVTDDSGTIIDCLMQTALRAGVTIKTRSPVKQVTATHPGFLIGLKDGEVSCDRILLATGSSPQGHRIAKSLGHRIEPPVPSLFTFTIKD 199
BLAST of mRNA_A-nodosum_M_contig9600.5.2 vs. uniprot
Match: A0A847HXD0_9DEIN (NAD(P)/FAD-dependent oxidoreductase n=1 Tax=Deinococcales bacterium TaxID=2478479 RepID=A0A847HXD0_9DEIN) HSP 1 Score: 110 bits (274), Expect = 2.280e-26 Identity = 63/139 (45.32%), Postives = 73/139 (52.52%), Query Frame = 1
Query: 1 LIAQGCPRGSKQLIGPFSSLFGPADAAAWFRERGVALKTEGDGRMFPQSDDSQTIIDCLQGKRIYA------------------------------ISCDYVLQATGAARGGHVWAKQLGHAVSPAVPSLFTLTVKDPR 327
L+ +G PRG++ L GPF+ FGP D AWFR RGVALKTE DGRMFP +DDS TI+DCL A + D VL ATG A G+ WA LGH + P VPSLFT V D R
Sbjct: 57 LLVRGYPRGARALRGPFTR-FGPRDTVAWFRARGVALKTEPDGRMFPTTDDSATIVDCLVETARAAGVELRTRAPVTGVEAGTQAAFRVELRDGTSLPADRVLLATGGAPAGYRWAAALGHTIEPPVPSLFTFDVSDAR 194
BLAST of mRNA_A-nodosum_M_contig9600.5.2 vs. uniprot
Match: A0A6I5PX31_9CYAN (Aminoacetone oxidase family FAD-binding enzyme (Fragment) n=1 Tax=Leptolyngbya sp. SIO3F4 TaxID=2607780 RepID=A0A6I5PX31_9CYAN) HSP 1 Score: 105 bits (262), Expect = 4.230e-26 Identity = 61/135 (45.19%), Postives = 73/135 (54.07%), Query Frame = 1
Query: 4 IAQGCPRGSKQLIGPFSSLFGPADAAAWFRERGVALKTEGDGRMFPQSDDSQTIIDCL------QGKRIYAIS----------------------CDYVLQATGAARGGHVWAKQLGHAVSPAVPSLFTLTVKDP 324
+ Q PRG K L G FS F P D AW+++RGV LKTE DGRMFP +DDS TI+ CL +G I S CD +L ATG++ GH AK LGH + P VPSLFT T+KDP
Sbjct: 63 LVQNYPRGGKALRGAFSR-FQPQDTIAWYQQRGVKLKTEADGRMFPVTDDSATIVTCLMKSAAKEGVTIQTRSPVKQVTKTTSGFKVSLKDSKVLCDRILLATGSSPQGHRIAKSLGHTIEPPVPSLFTFTIKDP 196
BLAST of mRNA_A-nodosum_M_contig9600.5.2 vs. uniprot
Match: A0A8J7JAB2_9CYAN (NAD(P)/FAD-dependent oxidoreductase n=1 Tax=Lusitaniella coriacea LEGE 07157 TaxID=945747 RepID=A0A8J7JAB2_9CYAN) HSP 1 Score: 107 bits (268), Expect = 1.770e-25 Identity = 63/139 (45.32%), Postives = 74/139 (53.24%), Query Frame = 1
Query: 1 LIAQGCPRGSKQLIGPFSSLFGPADAAAWFRERGVALKTEGDGRMFPQSDDSQTIIDCL------------QGKRIYAI------------------SCDYVLQATGAARGGHVWAKQLGHAVSPAVPSLFTLTVKDPR 327
L+ Q PRG K L G FS F P D AWF ERGV LKTE DGRMFP +DDS+TII+CL G R+ ++ D VL ATG+ + WAK LGH + P VPSLFT +KDPR
Sbjct: 60 LLVQNYPRGGKVLRGAFSR-FQPQDTVAWFEERGVRLKTEADGRMFPVTDDSETIINCLLESAQEAGVQIRTGVRVESVCKDSEGKFEIGLRGGEMLQQDRVLLATGSNPSAYQWAKDLGHTIIPPVPSLFTFKIKDPR 197
BLAST of mRNA_A-nodosum_M_contig9600.5.2 vs. uniprot
Match: A0A2T2W2P6_9CYAN (Aminoacetone oxidase family FAD-binding enzyme n=4 Tax=Cyanobacteria TaxID=1117 RepID=A0A2T2W2P6_9CYAN) HSP 1 Score: 106 bits (265), Expect = 5.670e-25 Identity = 65/131 (49.62%), Postives = 76/131 (58.02%), Query Frame = 1
Query: 19 PRGSKQLIGPFSSLFGPADAAAWFRERGVALKTEGDGRMFPQSDDSQTIIDCLQGK------RIY---AIS--------------------CDYVLQATGAARGGHVWAKQLGHAVSPAVPSLFTLTVKDP 324
PRGSK L GPFS F P D AWF +RGV LKTE DGRMFP +DDS TI+DCL G+ RIY AI+ CD +L ATG++ G+ A +LGH + P VPSLFT TV DP
Sbjct: 79 PRGSKVLRGPFSR-FQPQDTVAWFEQRGVRLKTEADGRMFPTTDDSGTIVDCLLGEARRLGIRIYTGQAIAHIQPDETGFGLTTRAGAEWRCDQLLLATGSSPNGYRLALKLGHDLVPPVPSLFTFTVPDP 208
BLAST of mRNA_A-nodosum_M_contig9600.5.2 vs. uniprot
Match: A0A7W1U1K6_9BACT (NAD(P)/FAD-dependent oxidoreductase n=1 Tax=Parachlamydiaceae bacterium TaxID=2052176 RepID=A0A7W1U1K6_9BACT) HSP 1 Score: 106 bits (264), Expect = 6.260e-25 Identity = 60/133 (45.11%), Postives = 73/133 (54.89%), Query Frame = 1
Query: 4 IAQGCPRGSKQLIGPFSSLFGPADAAAWFRERGVALKTEGDGRMFPQSDDSQTIIDCL------------------------QGKRIY-----AISCDYVLQATGAARGGHVWAKQLGHAVSPAVPSLFTLTV 315
+ Q PRG K LIGPF F P D WF RGV LKTE DGRMFP +DDSQTIIDCL +G ++ + CD +L ATG++ GH WA++LGH+V +VPSLFT V
Sbjct: 63 LTQNYPRGDKALIGPFHR-FQPRDTVQWFESRGVMLKTENDGRMFPVTDDSQTIIDCLLLEAQRLGVSIRLKQRIERIVKQDKGFELHFAGGETLFCDGLLLATGSSPQGHQWAQELGHSVKSSVPSLFTFNV 194
BLAST of mRNA_A-nodosum_M_contig9600.5.2 vs. uniprot
Match: UPI001C010508 (NAD(P)/FAD-dependent oxidoreductase n=1 Tax=Leptothoe kymatousa TaxID=2651727 RepID=UPI001C010508) HSP 1 Score: 106 bits (264), Expect = 6.800e-25 Identity = 62/135 (45.93%), Postives = 75/135 (55.56%), Query Frame = 1
Query: 4 IAQGCPRGSKQLIGPFSSLFGPADAAAWFRERGVALKTEGDGRMFPQSDDSQTIIDCLQG---------------KRIYA-------------ISCDYVLQATGAARGGHVWAKQLGHAVSPAVPSLFTLTVKDP 324
+ Q PRG K L G FS F P D AW+R+RGV LKTE DGRMFP +DDS TI+DCL K++ A ++CD +L ATG + GH A LGHA++ VPSLFT TVKDP
Sbjct: 68 LVQNYPRGGKALRGAFSR-FQPQDTIAWYRQRGVKLKTEADGRMFPVTDDSGTIVDCLVKAARTAGVTIKTRAAVKQVTATEPGFVLSLKTGKVACDRILCATGGSPQGHRIAHSLGHAIASPVPSLFTFTVKDP 201 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9600.5.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig9600.5.2 >prot_A-nodosum_M_contig9600.5.2 ID=prot_A-nodosum_M_contig9600.5.2|Name=mRNA_A-nodosum_M_contig9600.5.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=110bp LIAQGCPRGSKQLIGPFSSLFGPADAAAWFRERGVALKTEGDGRMFPQSDback to top mRNA from alignment at A-nodosum_M_contig9600:6735..7612+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig9600.5.2 ID=mRNA_A-nodosum_M_contig9600.5.2|Name=mRNA_A-nodosum_M_contig9600.5.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=878bp|location=Sequence derived from alignment at A-nodosum_M_contig9600:6735..7612+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig9600:6735..7612+ >mRNA_A-nodosum_M_contig9600.5.2 ID=mRNA_A-nodosum_M_contig9600.5.2|Name=mRNA_A-nodosum_M_contig9600.5.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=330bp|location=Sequence derived from alignment at A-nodosum_M_contig9600:6735..7612+ (Ascophyllum nodosum dioecious)back to top |