prot_A-nodosum_M_contig9550.3.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig9550.3.1
Unique Nameprot_A-nodosum_M_contig9550.3.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length134
Homology
BLAST of mRNA_A-nodosum_M_contig9550.3.1 vs. uniprot
Match: D7G282_ECTSI (3-isopropylmalate dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G282_ECTSI)

HSP 1 Score: 251 bits (640), Expect = 4.480e-80
Identity = 122/133 (91.73%), Postives = 129/133 (96.99%), Query Frame = 0
Query:    2 SDSILLAAIGGPKWDNNPRELRPETGLLAMRKELGLFANLRPAKVMKELMDASTLKPEIVEGVDIMVVRELTGDVYFGEPKGIDELPTGERVGYNNMIYMEHEVERIARVAYEVALKRGKRLCSVDKANVLDV 134
            SDSILLAAIGGPKWD NPRELRPETGLLAMR +LGLFANLRPAKVMKEL+DAS+LKPEIVEGVDIMVVRELTGDVYFG PKGIDELP+GERVGYNNMIY EHEVERIA+VAY+VA+KRGKRLCSVDKANVLDV
Sbjct:  113 SDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDV 245          
BLAST of mRNA_A-nodosum_M_contig9550.3.1 vs. uniprot
Match: A0A835ZK29_9STRA (3-isopropylmalate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK29_9STRA)

HSP 1 Score: 231 bits (588), Expect = 1.710e-72
Identity = 111/133 (83.46%), Postives = 123/133 (92.48%), Query Frame = 0
Query:    2 SDSILLAAIGGPKWDNNPRELRPETGLLAMRKELGLFANLRPAKVMKELMDASTLKPEIVEGVDIMVVRELTGDVYFGEPKGIDELPTGERVGYNNMIYMEHEVERIARVAYEVALKRGKRLCSVDKANVLDV 134
            SDS+LL+AIGGPKWD NPRE RPETGLLAMRK LGLFANLRPAKV+++L+DASTLKPEIV+GVDIMVVRELTGDVYFG PKGI+   +GER GYNNMIY EHEVERIARVA++VA KRGKR+CSVDKANVLDV
Sbjct:  109 SDSVLLSAIGGPKWDGNPREQRPETGLLAMRKGLGLFANLRPAKVVRQLLDASTLKPEIVDGVDIMVVRELTGDVYFGTPKGIETTESGERFGYNNMIYYEHEVERIARVAFDVARKRGKRVCSVDKANVLDV 241          
BLAST of mRNA_A-nodosum_M_contig9550.3.1 vs. uniprot
Match: A0A7S1G269_9STRA (3-isopropylmalate dehydrogenase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G269_9STRA)

HSP 1 Score: 224 bits (570), Expect = 8.920e-71
Identity = 111/134 (82.84%), Postives = 121/134 (90.30%), Query Frame = 0
Query:    2 SDSILLAAIGGPKWDNNPRELRPETGLLAMRKELGLFANLRPAKVMKELMDASTLKPEIVEGVDIMVVRELTGDVYFGEPKGIDELP-TGERVGYNNMIYMEHEVERIARVAYEVALKRGKRLCSVDKANVLDV 134
            SDS+LLA IGGPKWD NPRELRPE+GLL MRKE+GLFANLRPAKVM +L+DASTLK EIVEGVD+MVVRELTGDVYFG PKGID  P TGERVGYNNMIY E EV RIA+VA +VA+KRGK+LCSVDKANVLDV
Sbjct:  111 SDSVLLACIGGPKWDGNPRELRPESGLLKMRKEMGLFANLRPAKVMSQLVDASTLKREIVEGVDVMVVRELTGDVYFGAPKGIDTDPVTGERVGYNNMIYSESEVRRIAKVAGDVAMKRGKKLCSVDKANVLDV 244          
BLAST of mRNA_A-nodosum_M_contig9550.3.1 vs. uniprot
Match: A0A7S2RSG3_9STRA (3-isopropylmalate dehydrogenase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RSG3_9STRA)

HSP 1 Score: 226 bits (577), Expect = 1.150e-70
Identity = 109/133 (81.95%), Postives = 121/133 (90.98%), Query Frame = 0
Query:    2 SDSILLAAIGGPKWDNNPRELRPETGLLAMRKELGLFANLRPAKVMKELMDASTLKPEIVEGVDIMVVRELTGDVYFGEPKGIDELPTGERVGYNNMIYMEHEVERIARVAYEVALKRGKRLCSVDKANVLDV 134
            SDS+LLA IGGPKWD NPR+ RPETGLLAMRK +GLFANLRPAKV+ +L+DASTLK EIVEGVDIMVVRELTGDVYFGEPKGID L  GERVGYNNMIY E E++RIARVAY+V+LKR K+LCS+DKANVLDV
Sbjct:  122 SDSVLLACIGGPKWDGNPRDKRPETGLLAMRKNMGLFANLRPAKVLPQLVDASTLKREIVEGVDIMVVRELTGDVYFGEPKGIDTLEDGERVGYNNMIYKESEIDRIARVAYDVSLKRRKQLCSIDKANVLDV 254          
BLAST of mRNA_A-nodosum_M_contig9550.3.1 vs. uniprot
Match: A0A7S1G2F4_9STRA (3-isopropylmalate dehydrogenase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G2F4_9STRA)

HSP 1 Score: 224 bits (570), Expect = 9.470e-70
Identity = 111/134 (82.84%), Postives = 121/134 (90.30%), Query Frame = 0
Query:    2 SDSILLAAIGGPKWDNNPRELRPETGLLAMRKELGLFANLRPAKVMKELMDASTLKPEIVEGVDIMVVRELTGDVYFGEPKGIDELP-TGERVGYNNMIYMEHEVERIARVAYEVALKRGKRLCSVDKANVLDV 134
            SDS+LLA IGGPKWD NPRELRPE+GLL MRKE+GLFANLRPAKVM +L+DASTLK EIVEGVD+MVVRELTGDVYFG PKGID  P TGERVGYNNMIY E EV RIA+VA +VA+KRGK+LCSVDKANVLDV
Sbjct:  111 SDSVLLACIGGPKWDGNPRELRPESGLLKMRKEMGLFANLRPAKVMSQLVDASTLKREIVEGVDVMVVRELTGDVYFGAPKGIDTDPVTGERVGYNNMIYSESEVRRIAKVAGDVAMKRGKKLCSVDKANVLDV 244          
BLAST of mRNA_A-nodosum_M_contig9550.3.1 vs. uniprot
Match: A0A7R9W554_9STRA (3-isopropylmalate dehydrogenase (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W554_9STRA)

HSP 1 Score: 218 bits (555), Expect = 3.070e-69
Identity = 109/133 (81.95%), Postives = 119/133 (89.47%), Query Frame = 0
Query:    2 SDSILLAAIGGPKWDNNPRELRPETGLLAMRKELGLFANLRPAKVMKELMDASTLKPEIVEGVDIMVVRELTGDVYFGEPKGIDELPTGERVGYNNMIYMEHEVERIARVAYEVALKRGKRLCSVDKANVLDV 134
            SDS+LLA IGG KWDNNPRELRPETGLL MRKE+GLFANLRPAKV+ +L+DASTLK EIVEGVD+MVVRELTGDVYFG PKGIDE   GERVGYNNMIY E E++RIARVA +VA KRG +LCSVDKANVLDV
Sbjct:   61 SDSVLLACIGGYKWDNNPRELRPETGLLKMRKEMGLFANLRPAKVLSQLVDASTLKREIVEGVDVMVVRELTGDVYFGTPKGIDERD-GERVGYNNMIYSESEIDRIARVAGDVASKRGGKLCSVDKANVLDV 192          
BLAST of mRNA_A-nodosum_M_contig9550.3.1 vs. uniprot
Match: A0A7S3Q524_9STRA (3-isopropylmalate dehydrogenase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q524_9STRA)

HSP 1 Score: 216 bits (551), Expect = 6.980e-67
Identity = 108/133 (81.20%), Postives = 119/133 (89.47%), Query Frame = 0
Query:    2 SDSILLAAIGGPKWDNNPRELRPETGLLAMRKELGLFANLRPAKVMKELMDASTLKPEIVEGVDIMVVRELTGDVYFGEPKGIDELPTGERVGYNNMIYMEHEVERIARVAYEVALKRGKRLCSVDKANVLDV 134
            SDS+LLA IGG KWD NPRELRPETGLL MRKE+GLFANLRPAKV+ +L+DASTLK E+VEGVD+MVVRELTGDVYFGEPKGID +  GERVGYNNMIY E E+ERIARVA +VA KRG +LCSVDKANVLDV
Sbjct:  106 SDSVLLACIGGYKWDANPRELRPETGLLKMRKEMGLFANLRPAKVIDQLIDASTLKREVVEGVDVMVVRELTGDVYFGEPKGIDVI-NGERVGYNNMIYSESEIERIARVAGDVASKRGGKLCSVDKANVLDV 237          
BLAST of mRNA_A-nodosum_M_contig9550.3.1 vs. uniprot
Match: A0A7S0Z0Z5_9CRYP (3-isopropylmalate dehydrogenase n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z0Z5_9CRYP)

HSP 1 Score: 214 bits (546), Expect = 1.730e-66
Identity = 103/133 (77.44%), Postives = 119/133 (89.47%), Query Frame = 0
Query:    2 SDSILLAAIGGPKWDNNPRELRPETGLLAMRKELGLFANLRPAKVMKELMDASTLKPEIVEGVDIMVVRELTGDVYFGEPKGIDELPTGERVGYNNMIYMEHEVERIARVAYEVALKRGKRLCSVDKANVLDV 134
            SDS LLAAIGGPKWD NPRELRPETGLL MRKELGLFANLRPA V+ +L+DASTLKPE+++GVDIMVVRELTGDVYFG PKGI+E   GER G+NNM Y E E+ RIA+VA+++A+KRGK++CSVDKANVLDV
Sbjct:   90 SDSCLLAAIGGPKWDKNPRELRPETGLLKMRKELGLFANLRPATVLDQLVDASTLKPEVIKGVDIMVVRELTGDVYFGAPKGIEERD-GERFGFNNMCYKESEIRRIAKVAFDLAMKRGKKVCSVDKANVLDV 221          
BLAST of mRNA_A-nodosum_M_contig9550.3.1 vs. uniprot
Match: A0A7S0BHP4_9RHOD (3-isopropylmalate dehydrogenase n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BHP4_9RHOD)

HSP 1 Score: 212 bits (539), Expect = 2.420e-66
Identity = 102/133 (76.69%), Postives = 118/133 (88.72%), Query Frame = 0
Query:    2 SDSILLAAIGGPKWDNNPRELRPETGLLAMRKELGLFANLRPAKVMKELMDASTLKPEIVEGVDIMVVRELTGDVYFGEPKGIDELPTGERVGYNNMIYMEHEVERIARVAYEVALKRGKRLCSVDKANVLDV 134
            +DSILLAAIGGPKWD  PRE RPETGLL +RK LGL+ANLRPAK +K+L+DAS+LK E+VEGVDIMVVRELTGDVYFGEPKG+ E   GERVGYNNMIY EHEV RI ++AY++++KR K+LCSVDKANVLDV
Sbjct:   14 TDSILLAAIGGPKWDGLPREKRPETGLLGLRKGLGLYANLRPAKSIKQLLDASSLKREVVEGVDIMVVRELTGDVYFGEPKGV-ETKNGERVGYNNMIYYEHEVTRIGKIAYDISMKRTKKLCSVDKANVLDV 145          
BLAST of mRNA_A-nodosum_M_contig9550.3.1 vs. uniprot
Match: B7G1X8_PHATC (3-isopropylmalate dehydrogenase n=2 Tax=Naviculales TaxID=38748 RepID=B7G1X8_PHATC)

HSP 1 Score: 214 bits (546), Expect = 4.590e-66
Identity = 105/133 (78.95%), Postives = 120/133 (90.23%), Query Frame = 0
Query:    2 SDSILLAAIGGPKWDNNPRELRPETGLLAMRKELGLFANLRPAKVMKELMDASTLKPEIVEGVDIMVVRELTGDVYFGEPKGIDELPTGERVGYNNMIYMEHEVERIARVAYEVALKRGKRLCSVDKANVLDV 134
            SDS+LLA IGG KWD+NPRELRPE+GLL MRKE+GLFANLRPAKV+ +L+DASTLK E+VEGVD+MVVRELTGDVYFG PKGI+ +  GERVGYNNMIY E E++RIARVA +VA KRGK+LCSVDKANVLDV
Sbjct:  110 SDSVLLACIGGYKWDSNPRELRPESGLLKMRKEMGLFANLRPAKVLPQLIDASTLKREVVEGVDVMVVRELTGDVYFGTPKGIETI-NGERVGYNNMIYSESEIDRIARVAGDVASKRGKKLCSVDKANVLDV 241          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9550.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G282_ECTSI4.480e-8091.733-isopropylmalate dehydrogenase n=2 Tax=Ectocarpus... [more]
A0A835ZK29_9STRA1.710e-7283.463-isopropylmalate dehydrogenase n=1 Tax=Tribonema ... [more]
A0A7S1G269_9STRA8.920e-7182.843-isopropylmalate dehydrogenase n=1 Tax=Corethron ... [more]
A0A7S2RSG3_9STRA1.150e-7081.953-isopropylmalate dehydrogenase n=1 Tax=Rhizochrom... [more]
A0A7S1G2F4_9STRA9.470e-7082.843-isopropylmalate dehydrogenase n=1 Tax=Corethron ... [more]
A0A7R9W554_9STRA3.070e-6981.953-isopropylmalate dehydrogenase (Fragment) n=1 Tax... [more]
A0A7S3Q524_9STRA6.980e-6781.203-isopropylmalate dehydrogenase n=1 Tax=Chaetocero... [more]
A0A7S0Z0Z5_9CRYP1.730e-6677.443-isopropylmalate dehydrogenase n=1 Tax=Hemiselmis... [more]
A0A7S0BHP4_9RHOD2.420e-6676.693-isopropylmalate dehydrogenase n=1 Tax=Rhodosorus... [more]
B7G1X8_PHATC4.590e-6678.953-isopropylmalate dehydrogenase n=2 Tax=Naviculale... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024084Isopropylmalate dehydrogenase-like domainSMARTSM01329Iso_dh_2coord: 1..134
e-value: 1.9E-7
score: -111.3
IPR024084Isopropylmalate dehydrogenase-like domainPFAMPF00180Iso_dhcoord: 1..133
e-value: 1.1E-42
score: 146.5
NoneNo IPR availableGENE3D3.40.718.10Isopropylmalate Dehydrogenasecoord: 1..134
e-value: 4.2E-39
score: 136.5
NoneNo IPR availablePANTHERPTHR42979:SF13-ISOPROPYLMALATE DEHYDROGENASEcoord: 1..133
NoneNo IPR availableSUPERFAMILY53659Isocitrate/Isopropylmalate dehydrogenase-likecoord: 2..133
IPR004429Isopropylmalate dehydrogenasePANTHERPTHR429793-ISOPROPYLMALATE DEHYDROGENASEcoord: 1..133

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9550contigA-nodosum_M_contig9550:13558..15842 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9550.3.1mRNA_A-nodosum_M_contig9550.3.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig9550 13558..15842 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig9550.3.1 ID=prot_A-nodosum_M_contig9550.3.1|Name=mRNA_A-nodosum_M_contig9550.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=134bp
ESDSILLAAIGGPKWDNNPRELRPETGLLAMRKELGLFANLRPAKVMKEL
MDASTLKPEIVEGVDIMVVRELTGDVYFGEPKGIDELPTGERVGYNNMIY
MEHEVERIARVAYEVALKRGKRLCSVDKANVLDV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024084IsoPropMal-DH-like_dom
IPR004429Isopropylmalate_DH