prot_A-nodosum_M_contig8989.3.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8989.3.1
Unique Nameprot_A-nodosum_M_contig8989.3.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length258
Homology
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BLAST of mRNA_A-nodosum_M_contig8989.3.1 vs. uniprot
Match: A0A6H5KNI2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI2_9PHAE)

HSP 1 Score: 167 bits (422), Expect = 2.590e-43
Identity = 88/185 (47.57%), Postives = 122/185 (65.95%), Query Frame = 0 
Query:    1 MSWKGGLSMISVVIEDARGGQRDPNIGLTHNPSGLKIQLLGTIITVASPPNMMFKDGFHAGYSDDL-VNGLRHLRYNLNKLDVHLEQHARGGQESLLRVENMKEKRLALSQVGAIMDEEDFQFISALGGAWLGLSHTPKIKADSSVWWEGSKTPFVSIRLLVRRARLSS---VRVEEDAAYAEMA 181
            M W GGL M++ VI+DA GG+  P+I LT +PSG+ I+ LG  + +A+PP     DGF A     + VN +R LR ++  LD H+++HARGG E L  V+N+K+KR  L QVGAI+++E F+++ ALGG W+ + H P  K  S VW  GS TP +  R+L+RRARL+    + VEEDA YAE A
Sbjct: 2821 MRWDGGLVMVTAVIKDAVGGKAIPHIDLTQSPSGMTIEALGVKVRIAAPPEAKNMDGFSAACGGAVGVNSMRRLRGHVQNLDGHIDEHARGGDEGLRWVDNLKQKRTVLRQVGAILEDE-FRYLPALGGLWMRVRHLPSAKTASDVWNTGSATPTIEYRVLMRRARLADEGGLTVEEDAGYAEAA 3004
[Close]
BLAST of mRNA_A-nodosum_M_contig8989.3.1 vs. uniprot
Match: D7FWI3_ECTSI (Global transcription factor group n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWI3_ECTSI)

HSP 1 Score: 166 bits (421), Expect = 3.450e-43
Identity = 86/185 (46.49%), Postives = 122/185 (65.95%), Query Frame = 0 
Query:    1 MSWKGGLSMISVVIEDARGGQRDPNIGLTHNPSGLKIQLLGTIITVASPPNMMFKDGFHAGYSDDL-VNGLRHLRYNLNKLDVHLEQHARGGQESLLRVENMKEKRLALSQVGAIMDEEDFQFISALGGAWLGLSHTPKIKADSSVWWEGSKTPFVSIRLLVRRARLSS---VRVEEDAAYAEMA 181
            M W GGL M++ V++DA+GG+  P+I LT +PSG+ ++ LG  I +A+PP     DGF A     + VN +R LR  L KLD H+++HARGG E L  V+N+ +KR  L QVGAI+++E F+++ ALGG W+ + H P  K+ S VW  GS TP +  R+L+RRA L+    + VEED+ YAE A
Sbjct: 2095 MQWDGGLVMVTAVVKDAKGGKAIPDIDLTQSPSGMTMEALGVKIRIAAPPEAKNNDGFSAACGGAVGVNSMRRLRGQLQKLDGHIDEHARGGDEGLRWVDNLNQKRTVLRQVGAILEDE-FRYLPALGGLWMRVRHLPSAKSGSGVWNTGSATPTIEFRVLMRRALLADEGGLTVEEDSGYAEAA 2278
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8989.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KNI2_9PHAE2.590e-4347.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWI3_ECTSI3.450e-4346.49Global transcription factor group n=1 Tax=Ectocarp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8989contigA-nodosum_M_contig8989:9084..9857 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8989.3.1mRNA_A-nodosum_M_contig8989.3.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8989 8776..10236 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8989.3.1 ID=prot_A-nodosum_M_contig8989.3.1|Name=mRNA_A-nodosum_M_contig8989.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=258bp
MSWKGGLSMISVVIEDARGGQRDPNIGLTHNPSGLKIQLLGTIITVASPP
NMMFKDGFHAGYSDDLVNGLRHLRYNLNKLDVHLEQHARGGQESLLRVEN
MKEKRLALSQVGAIMDEEDFQFISALGGAWLGLSHTPKIKADSSVWWEGS
KTPFVSIRLLVRRARLSSVRVEEDAAYAEMAAAASAAEMAAAASAAEMIA
AASAAEAAAEVVETIAGEGNTPSGSFVWGEEQRRQAARLFESLPLAPTAR
MFSLLDD*
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