prot_A-nodosum_M_contig89.22.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig89.22.1
Unique Nameprot_A-nodosum_M_contig89.22.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length65
Homology
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BLAST of mRNA_A-nodosum_M_contig89.22.1 vs. uniprot
Match: D7FJS3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJS3_ECTSI)

HSP 1 Score: 63.5 bits (153), Expect = 2.620e-10
Identity = 36/55 (65.45%), Postives = 40/55 (72.73%), Query Frame = 0 
Query:   11 RLSVYAQEICAIQQQLSDEPQQGGETAPPPYGQRTRVTPERLALVIREQCKNFYQ 65
            + S  A+EI A+Q QLS+EP QGGE A  PYGQR RVTP RLA VIREQ K F Q
Sbjct:  244 KTSRQAEEIHAMQVQLSEEPLQGGE-ATAPYGQRARVTPGRLAFVIREQMKTFNQ 297
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BLAST of mRNA_A-nodosum_M_contig89.22.1 vs. uniprot
Match: A0A6H5KNK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNK5_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 4.540e-9
Identity = 32/44 (72.73%), Postives = 34/44 (77.27%), Query Frame = 0 
Query:   22 IQQQLSDEPQQGGETAPPPYGQRTRVTPERLALVIREQCKNFYQ 65
            +Q QLS+EP QGGE AP PYGQR RVTP RLA VIREQ K F Q
Sbjct:    1 MQVQLSEEPLQGGE-APAPYGQRARVTPGRLAFVIREQMKTFNQ 43
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig89.22.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FJS3_ECTSI2.620e-1065.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KNK5_9PHAE4.540e-972.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D6.10.140.1350coord: 1..65
e-value: 7.9E-6
score: 27.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig89contigA-nodosum_M_contig89:164651..165746 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig89.22.1mRNA_A-nodosum_M_contig89.22.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig89 164651..165757 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig89.22.1 ID=prot_A-nodosum_M_contig89.22.1|Name=mRNA_A-nodosum_M_contig89.22.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=65bp
MWEMVESFEKRLSVYAQEICAIQQQLSDEPQQGGETAPPPYGQRTRVTPE
RLALVIREQCKNFYQ
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