prot_A-nodosum_M_contig873.4.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig873.4.1
Unique Nameprot_A-nodosum_M_contig873.4.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length219
Homology
BLAST of mRNA_A-nodosum_M_contig873.4.1 vs. uniprot
Match: A0A6H5JWI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI3_9PHAE)

HSP 1 Score: 206 bits (524), Expect = 1.110e-57
Identity = 105/214 (49.07%), Postives = 144/214 (67.29%), Query Frame = 0
Query:    7 FTRNFAAVQGGALLHSGVLVALFNCTFESNVAGEDGLAVMSLGIAENLSALSFQNNSFFCPLGKYGFTEDVNEFVEGSDTCRRSVVCSLCTDPQCEAHTG--IDMDETTVPVCELVPDGVNITGKSGMTLETLNLMPGFYRTSNQSREVLECYREEACIGGSNVGRYCAEGYAGPYCAACDEGYGSGFQYSCNSCQGSDMWAGISGAVAVLVVA 218
            F  N A   GGA LHSGVLV L   TF  N A + GLAV SLGIA N++  +F++N+++C  G+YG+  ++ E  E S TCR  VVCS C    CE + G  + +++  VP+CE    GV+ +G  G+TL  LNL+ G+YRTS +S+ VL+CY+EEACIGG++V +YC EGY G YCA CDEGY SG+Q+SC+ C G ++ + I  +VA+  VA
Sbjct:  483 FEDNLAVGSGGAYLHSGVLVELDRSTFVGNRARDAGLAVQSLGIAGNITDTTFESNTYYCSSGQYGYEYEIGE-DEVSGTCRFGVVCSSCA-ASCEDNPGSVVVVNDAHVPICETAMTGVDTSGDGGVTLPELNLLRGYYRTSAESQNVLKCYQEEACIGGTDVSQYCQEGYRGAYCAVCDEGYASGYQFSCSICDGENLRSAIGTSVALFFVA 694          
BLAST of mRNA_A-nodosum_M_contig873.4.1 vs. uniprot
Match: D7FUB6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUB6_ECTSI)

HSP 1 Score: 189 bits (480), Expect = 2.880e-54
Identity = 98/213 (46.01%), Postives = 128/213 (60.09%), Query Frame = 0
Query:    1 MVVNSSFTRNFAAVQGGALLHSGVLVALFNCTFESNVAGEDGLAVMSLGIAENLSALSFQNNSFFCPLGKYGFTEDVNEFVEGSDTCRRSVVCSLCTDPQCEAHTGID-----MDETTVPVCELVPDGVNITGKSGMTLETLNLMPGFYRTSNQSREVLECYREEACIGGSNVGRYCAEGYAGPYCAACDEGYGSGFQYSCNSCQGSDMWAGI 208
            +V + SF  NFAA+ GGALLHSGVLV +                     IAEN + ++F  N+F+C  G+YG      +  E +DTCR  VVCS C    CE    +D     +++  VP C+ V  GVN++G +G TL+TL+L  G+YRTS +S  +LEC+REEAC+GGS  G YCA GY G YCAAC+EGY SG QYSC SC G +  + I
Sbjct:  250 LVQDCSFQANFAALSGGALLHSGVLVGVHXXXXXXXXXXXXXXXXXXXXIAENFTDVTFAENTFYCAPGQYGSDAHFLD-EEVADTCRLEVVCSRCVSSPCEDDDMLDNGISVLEDNVVPHCKAVAVGVNVSGNAGTTLQTLDLESGYYRTSAESDIILECHREEACVGGSTAGEYCATGYQGAYCAACEEGYASGLQYSCKSCGGDNATSAI 461          
BLAST of mRNA_A-nodosum_M_contig873.4.1 vs. uniprot
Match: D7FWD7_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWD7_ECTSI)

HSP 1 Score: 155 bits (392), Expect = 4.610e-40
Identity = 75/198 (37.88%), Postives = 120/198 (60.61%), Query Frame = 0
Query:   12 AAVQGGALLHSGVLVALFNCTFESNVAGEDGLAVMSLGIAENLSALSFQNNSFFCPLGKYGFTEDVNEFVEGSDTCRRSVVCSLCTDPQCEA-HTGIDMDETTVPVCELVPDGVNITGKSGMTLETLNLMPGFYRTSNQSREVLECYREEACIGGSNVGRYCAEGYAGPYCAACDEGYGSGFQYSCNSCQGSDMWAGI 208
            A + GG + H+G L  +    F SN AG+DG AV S+G+ +    ++F +N+  CPLG+Y + ++  +     D+CR  + C+ C+   C+A  + + M ++T+PVC  + +G   +  SG T+ TL+L  G+YRTS +S+ V+ECY   AC GG++   YCA+GY GPYC+ C +GY  G  Y C+ C G+ M + +
Sbjct:  225 AEISGGTIFHTGYL-GMIETVFASNEAGQDGTAVFSIGVVQQALNVTFASNTLNCPLGEYAYDKEAED-----DSCRFELACARCS-ADCDAIPSSVTMADSTIPVCLELMEGTKASS-SGTTVATLDLQEGYYRTSAESQVVVECYLTGACAGGTDPENYCADGYEGPYCSVCADGYAPGTAYQCHECSGTSMGSAV 414          
BLAST of mRNA_A-nodosum_M_contig873.4.1 vs. uniprot
Match: A0A6H5JSF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSF5_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 4.180e-37
Identity = 72/196 (36.73%), Postives = 116/196 (59.18%), Query Frame = 0
Query:   14 VQGGALLHSGVLVALFNCTFESNVAGEDGLAVMSLGIAENLSALSFQNNSFFCPLGKYGFTEDVNEFVEGSDTCRRSVVCSLCTDPQCEA-HTGIDMDETTVPVCELVPDGVNITGKSGMTLETLNLMPGFYRTSNQSREVLECYREEACIGGSNVGRYCAEGYAGPYCAACDEGYGSGFQYSCNSCQGSDMWAGI 208
            + GG + H+G L  +    F SN AG+DG AV S+G+ +    ++F +N+  CP G+  + ++  +     D+CR  + C+ C+   C+A  + + M ++T+PVC    +G   +  SG T+ TL+L  G+YRTS +S+ V+ECY   AC GG++   YCA+GY GPYC+ C +GY  G  Y C+ C G+ M + +
Sbjct:  468 ISGGTIFHTGHL-GMIETVFASNEAGQDGTAVFSMGVVQKALNVAFASNTLNCPPGENAYDKEAED-----DSCRFELACARCS-ADCDAIPSSVTMADSTIPVCVESMEGTKASS-SGTTVATLDLQEGYYRTSAESQVVVECYLTSACAGGTDPKNYCADGYEGPYCSVCADGYAPGTAYQCHECSGTSMGSAV 655          
BLAST of mRNA_A-nodosum_M_contig873.4.1 vs. uniprot
Match: A0A6H5JUB2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUB2_9PHAE)

HSP 1 Score: 135 bits (339), Expect = 6.350e-33
Identity = 73/166 (43.98%), Postives = 100/166 (60.24%), Query Frame = 0
Query:   16 GGALLHSGVLVALFNCTFESNVAGEDGLAVMSLGIAENLSALSFQNNSFFCPLGKYGFTEDVNEFVEGSDTCRRSVVCSLCTDPQCEA-HTGIDMDETTVPVCELVPDGVNITGKSGMTLETLNLMPGFYRTSNQSREVLECYREEACIGGSNVGRYCAEGYAGPY 180
            GGA LHSG+LV+L + TF  N AG  GLAV SLGI ENL+  +F++N+++C  G+Y    D +E    S T R   VC+ C     E   + +  +   VP+CE +  G +  G +G T+  L L P +YRTS  SREVL+C++EEAC+GG     YCA GY G +
Sbjct:  240 GGAYLHSGLLVSLADTTFVGNRAGAAGLAVSSLGIIENLTDTTFESNTYYCQSGQYDIGADEDEV---SGTYRFDEVCTCCAVSNAEIPESMVVANNAFVPICETIMKGAS--GNAGATVAALELDPDYYRTSADSREVLQCHQEEACMGGVETSEYCASGYEGAF 400          
BLAST of mRNA_A-nodosum_M_contig873.4.1 vs. uniprot
Match: D7FTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT9_ECTSI)

HSP 1 Score: 129 bits (324), Expect = 8.900e-31
Identity = 70/167 (41.92%), Postives = 98/167 (58.68%), Query Frame = 0
Query:   61 NNSFFCPLGKYGFTEDV--NEFVEGSDTCRRSVVCSLCT---DPQCEAHTGIDMDETTVPVCELVPDGVNITGKSGMTLETLNLMPGFYRTSNQSREVLECYREEACIGGSNVGRYCAEGYAGPYCAACDEGYGSGFQYSCNSCQGSD-----MWAGISGAVAVLVV 217
            +N F+C  G++G TE +   +   G+D CR   VCS C    D + E+   + +D  T+P CE  P+G   T + G TL TL ++PGFYR+S  S ++ EC+ ++AC GGS VG YCAEGY GPYCA C  GY  G+  +C SC G       ++A   GA+A+  V
Sbjct:  513 DNDFYCEEGEFG-TETLIDKDLFGGADQCRFGRVCSRCASECDSELESAAEL-VDAETLPTCEEAPEGSRTT-RRGATLATLEILPGFYRSSETSTDIRECFHKQACEGGSAVGTYCAEGYIGPYCAVCSAGYSPGYSRTCKSCMGDSKKSALVFAAAIGALALAAV 676          
BLAST of mRNA_A-nodosum_M_contig873.4.1 vs. uniprot
Match: A0A6H5L324_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L324_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 1.420e-29
Identity = 66/162 (40.74%), Postives = 96/162 (59.26%), Query Frame = 0
Query:   62 NSFFCPLGKYGFTEDV--NEFVEGSDTCRRSVVCSLCTDPQCEAH---TGIDMDETTVPVCELVPDGVNITGKSGMTLETLNLMPGFYRTSNQSREVLECYREEACIGGSNVGRYCAEGYAGPYCAACDEGYGSGFQYSCNSCQGSDMWAGISGAVAVLVVA 218
            N F+C  G++G TE +   +   G+D CR   VCS C   +C +    T   +D  T+P CE  P+G   T + G TL TL ++PGFYR+S  S ++ EC+ ++AC GGS +G YC+EGY GPYCA C  GY  G+  +C SC G+   + +  A A+ ++A
Sbjct:  490 NDFYCEEGEFG-TETLIDKDLFGGADQCRFRRVCSRCAS-ECGSELERTAELVDADTLPTCETAPEGSRTT-RRGATLATLEVLPGFYRSSETSTDIRECFHKKACDGGSAIGTYCSEGYIGPYCAVCAAGYSPGYSRTCKSCMGNSKKSALVFAAAIGLLA 648          
BLAST of mRNA_A-nodosum_M_contig873.4.1 vs. uniprot
Match: D7FTU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU5_ECTSI)

HSP 1 Score: 124 bits (310), Expect = 6.570e-29
Identity = 67/160 (41.88%), Postives = 92/160 (57.50%), Query Frame = 0
Query:   63 SFFCPLGKYGFTEDVNEFVEGSDTCRRSVVCSLCTDPQCEAHTGIDM---DETTVPVCELVPDGVNITGKSGMTLETLNLMPGFYRTSNQSREVLECYREEACIGGSNVGRYCAEGYAGPYCAACDEGYGSGFQYSCNSCQGSDMWAG--ISGAVAVLVV 217
            SF+C  G   F+ +V   +EG D CR  +VCS C   +C +    ++   D   +P CE VP+G   T + G TL TL ++PG+YR+S  S ++ EC+ E+AC GG  VG YCA GY GPYCA C  G+  G+ +SC SC G        +  AV VLV+
Sbjct:  526 SFYCEEGT--FSTEVE--IEGEDVCRFGLVCSRCAS-ECASELEDEVTVADPDLLPACEAVPEGAQTTSRGG-TLATLEILPGYYRSSATSTDIRECFYEDACEGGKVVGEYCAAGYTGPYCAVCTAGFSPGYFHSCKSCMGDSRRRAFYVVSAVGVLVL 679          
BLAST of mRNA_A-nodosum_M_contig873.4.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI)

HSP 1 Score: 115 bits (287), Expect = 7.700e-26
Identity = 76/219 (34.70%), Postives = 115/219 (52.51%), Query Frame = 0
Query:    3 VNSSFTRNFAAVQGGALLHSGVLVALFNCTFESNVAGEDG-LAVMSLGIAENLSALSFQNNSFFCPLGKY-GFTEDVNEFVEGSDTCRRSVVCSLCTDPQCEAHTGIDMDETTVPVC-ELVPDGVNITGKSGMTLETLNLMPGFYRTSNQSREVLECYREEACIGG-SNVGRYCAEGYAGPYCAACDEGYGSGFQYSCNSCQGSDMWAGISGAVAVLVV 217
            V+++F  N AA  GGAL  +G   ++ +C+F  N + ++G  AV ++G  E+   +SF  N F CP G + G+    + F    + C+ + V     DP              VP C +L+    +  G+   TLETL++  G++R +    EVL CY  +AC+GG +    YC EGY GPYCA C EGY +   ++C +C  SD   GI+ A A+ VV
Sbjct: 1034 VDTTFEDN-AAGTGGALRLAGT-ASINSCSFVENFSDDEGGAAVSNIGTVESTENISFSANGFDCPSGTFLGYNASADLFEAVCNGCQTACVGCAFADP------------LLVPTCTDLLEHSTSSDGRD--TLETLSIQAGYWRATTSGTEVLACYHADACLGGVTGTSGYCLEGYEGPYCAICSEGYSAQMSFTCRTC--SDNAGGIALAAALAVV 1234          
BLAST of mRNA_A-nodosum_M_contig873.4.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 1.210e-24
Identity = 74/219 (33.79%), Postives = 108/219 (49.32%), Query Frame = 0
Query:    2 VVNSSFTRNFAAVQGGALLHSGVLVALFNCTFESNVAGE-DGLAVMSLGIAENLSALSFQNNSFFCPLGKY-GFTEDVNEFVEGSDTCRRSVVCSLCTDPQCEAHTGIDMDETTVPVCELVPDGVNITGKSGMTLETLNLMPGFYRTSNQSREVLECYREEACIGG-SNVGRYCAEGYAGPYCAACDEGYGSGFQYSCNSCQGSDMWAGISGAVAVLVV 217
            + NS F  N A   GGAL  +G    + NC+F  N + E +G AV ++G   +++  SF  N F CP G +   T  V+ F    + C  +  C  C          +  + +  P+C  V D     G   +TL+TL++  GF+R S  S EVL CY  +AC+GG +    YC EGY GPYC  C +GY     ++C+ C  +      +G +AV VV
Sbjct:  932 IENSVFEGNSAGT-GGALRLAGEAY-ISNCSFRENTSDEGEGAAVSNIGFISSITNASFDGNGFDCPAGTFRNVTGSVDHFEAICNGCETT--CDGC----------VFAEGSLAPICTEVMDHSTSDG-GNVTLQTLSIDRGFWRASTSSTEVLACYHADACLGGVTGASGYCEEGYEGPYCGICSDGYTEQLSFACSKCSENS-----AGGIAVAVV 1130          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig873.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JWI3_9PHAE1.110e-5749.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUB6_ECTSI2.880e-5446.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FWD7_ECTSI4.610e-4037.88Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
A0A6H5JSF5_9PHAE4.180e-3736.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUB2_9PHAE6.350e-3343.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTT9_ECTSI8.900e-3141.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L324_9PHAE1.420e-2940.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTU5_ECTSI6.570e-2941.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LSC0_ECTSI7.700e-2634.70Polymorphic Outer membrane protein G/I family n=3 ... [more]
A0A6H5K0E9_9PHAE1.210e-2433.79Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig873contigA-nodosum_M_contig873:191302..192742 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig873.4.1mRNA_A-nodosum_M_contig873.4.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig873 191302..192749 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig873.4.1 ID=prot_A-nodosum_M_contig873.4.1|Name=mRNA_A-nodosum_M_contig873.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=219bp
MVVNSSFTRNFAAVQGGALLHSGVLVALFNCTFESNVAGEDGLAVMSLGI
AENLSALSFQNNSFFCPLGKYGFTEDVNEFVEGSDTCRRSVVCSLCTDPQ
CEAHTGIDMDETTVPVCELVPDGVNITGKSGMTLETLNLMPGFYRTSNQS
REVLECYREEACIGGSNVGRYCAEGYAGPYCAACDEGYGSGFQYSCNSCQ
GSDMWAGISGAVAVLVVAG
back to top