prot_A-nodosum_M_contig840.11.16 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig840.11.16
Unique Nameprot_A-nodosum_M_contig840.11.16
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length1240
Homology
BLAST of mRNA_A-nodosum_M_contig840.11.16 vs. uniprot
Match: D7FKD5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKD5_ECTSI)

HSP 1 Score: 601 bits (1549), Expect = 1.010e-194
Identity = 398/995 (40.00%), Postives = 539/995 (54.17%), Query Frame = 0
Query:   19 QGTRVDCLFDDDYFRGTVDATDVDGEKRDLFRVCFDDGDVRDDVPEEDMKLPLEPGIRVQCLFGDDEVYFDGAIGQDNGDATYLVKFDDGDVLVAAPRRDIQIASPPTHHKSAKGDADQAKDVHGYTGNLEDACYEREGHMEEGQDGDAVGSVGSTAEDANSQEYWAHERGDMEYSEAKTGPVD-SHLKQTVPDRQHQDAGN-----------ALNSERNTSCAH-DCSGGEGHGVSDGERGTYSNREDRGDKAERTAGDDNSEGAPHFCSGRQERFIQ--ERSPAFIPAAQNPVHAYIEALAAATPRLMEDAPPDFRLWAVSYQMVALEDQLREQEAKGETWNDSILFVEGVLGGSN-TLSGRKFHSRRYDNGSCGYDGGR--TRGTTLKAGAVAPSFPTNLELRKMVENLSTLRIRQMALVRLCYGDSSLDMVQALCDLAEGYAKEGLWPQVSNHMTKVADILARLHGPEKIDDGGAFGTREGG---------WRNLESTCGDTFLHNLQAEERSSKLLFPTTDRYTNPALCSSLRSAGCARLIMRVFELVRTASATSDD-GQVVRVNLEALLLAHPDESLRSTGPDIFGN-DLPTACGWGVVVDVLRERSRLFVDLNLKVLEGVMPKHAGAVRIAFRRVDPEGLGIANAQEFLSELLEASHVSGFFSDADVYGLQSALKERIEADSVPTNINRESPPITWEEVLALIVLAEDPHTNVGNRQTRENRGRHSLLGIRVRLLTGRSQAHTNSLPAAYSNLSTALFELKRWAHREEIGHASLAKPFSTSCVLCVSFIRHSQKSKIKAKKLAEGWVQGDEGQDVFREECRRLLEECQRRTEVIFREEVEVKTWQTLVAYRAQTIAQELEGQGRDLEFAEKHLLRAWEILESRHGRYHTDVGAACISLGNLAIARNRQNEAENWFRRVLENFERCFLEERTPVNASIEATLGKLMVGRGHQIERGGERSPDKRASRRKLLLEVTRLLEKAATFYSERV 984
            +GTRVDCLF D+YFRG VD TD  G     +RV FDDGD+R+D P ED++LPLE G RV+C+F  ++ YFDG I  DNGDATY V FDDGDVL AAPR DI++ S  +H +SA   A  A+D +      E   ++         + ++ G+  +  +D NS+   A        +  +  PV+ +H     P R  +  G+           A  S+  +S  H   S GE   + D    +++ RE RG                   S R E   +  + S  ++P + NP+HA++EALAAA PRL+ +APPDFRL A+S+++  LE+QLR+QEA+GE W+  +   E  L  ++ +L GR     R D       GG    R TT + GA APSFP + ELR++ E+LSTLR++Q+ALVRLCYGD+SL+MVQA+ DLA+GYAKE LWPQVSNHM + ADILAR  G     +G       GG         ++      GD         +R+  L FPT +RY++PALC SL  A  ARL++ + + +R +     + GQV R N EA L  H D++LRS    +     +P+ CGWG  +  LR  S LF DLNLK++EGV  K A  VR+AF+ VDP+G G A +                                                    E+LAL+V  ++  T V  R     +   SLL +RV+ LTGR + HTN L AA  NLS AL EL+R    E  G   +    + +  L ++  RH + S IKAKKLAE W+QG EGQD++++EC+RL+ EC+RR EV+ R E+E +TWQ LVAYR++ + +EL G+G++L+ AE +L+R WEILESRHGR   DVGAAC+SLG+LA+ R R NEA +WFRR L  FE                                              L E T L+EKAATFYSERV
Sbjct:   11 KGTRVDCLFGDEYFRGKVDDTDGSGSS---YRVIFDDGDIREDAPPEDLELPLEQGCRVECMFEGEDGYFDGVISIDNGDATYKVDFDDGDVLDAAPRHDIRVLSW-SHEESAPSKAVTAEDNNTNVAEQEGTGFDTRYSDRSHNEAESEGNREAQKDDENSKVISA--------AHGELPPVEETHDSPRQPQRFSEVDGSEDGYGRAGDEPAGTSQHGSSPRHLGSSSGEPQRIHD----SWTGRELRG-----------------TLSNRNEPTTELVQASSLYVPTSPNPLHAHLEALAAAAPRLLAEAPPDFRLSAISHRIAVLEEQLRQQEARGEAWHLPVFSAETPLHPADPSLRGRLERQGRSDPEQATGSGGEGSPRATTARGGAAAPSFPAHAELRQVAEDLSTLRMKQIALVRLCYGDASLEMVQAIADLADGYAKEDLWPQVSNHMARAADILARDKGSRVPGNGFFITATPGGGTYVDPRLRFKGHSGLRGDEPRGGYPEGQRARGLAFPTENRYSDPALCRSLTQARSARLLLELLKGLRLSVVEGGERGQVERENFEAFLSTHKDKALRSARHRLLLEAQMPSNCGWGAALGCLRRNSPLFADLNLKIMEGVQQKQAAKVRLAFQAVDPDGTGCAES----------------------------------------------------EILALMVADDEEETAVEGRVGVAWQRLRSLLHVRVQTLTGRCETHTNRLAAASRNLSEALAELERLGLGEASGSVPVLNALTDA--LALTHRRHQEMSSIKAKKLAETWIQGKEGQDLWKQECKRLVLECRRRLEVVPRAEIEERTWQALVAYRSKILTRELGGKGKELDTAEDYLVRVWEILESRHGRNDPDVGAACVSLGSLAVIRRRLNEAIDWFRRALGTFE---------------------------------------------ALEEATGLMEKAATFYSERV 873          
BLAST of mRNA_A-nodosum_M_contig840.11.16 vs. uniprot
Match: A0A6H5JCV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCV6_9PHAE)

HSP 1 Score: 298 bits (762), Expect = 9.730e-83
Identity = 261/789 (33.08%), Postives = 346/789 (43.85%), Query Frame = 0
Query:   19 QGTRVDCLFDDDYFRGTVDATDVDGEKRDLFRVCFDDGDVRDDVPEEDMKLPLEPGIRVQCLFGDDEVYFDGAIGQDNGDATYLVKFDDGDVLVAAPRRDIQIASPPTHHKSAKGDADQAKD----VHGYTGNLEDACYEREGHMEEGQDGDAVGSVGSTAEDANSQEYWA---------------------HERGDMEYSEAKTGPVDSHLKQTVPDR------------------QHQDAGNALNSERNTSCAHD-CSGGEGHGVSDGERGTYSNREDRGDKAERTAGDDNSEGAPH----FCSGRQ------------ERFIQERSPAFIPAAQNPVHAYIEALAAATPRLMEDAPPDFRLWAVSYQMVALEDQLREQ------------EAKGETWNDSILFVEGVLGGSN-TLSGRKFHSRRY--------DNGSCGYDGGRTRGTTLKAGAVAPSFPTNLELRKMVENLSTLRIRQ----------------------------------MALVRLCYGDSSLDMVQALCDLAEGYAKEGLWPQ-----------------------------------------------------------------VSNHMTKVADILARLHGPEKIDDGGAFGTREGGWRNLESTC---------GDTFLHNLQAEERSSKLLFPTTDR----YTNPALCSSLRSAGCARLIMRVFELVRTASATSDD-GQVVRVNLEALLLAHPDESLRSTGPDIFGN-DLPTACGWGVVVDVLRERSRLFVDLNLKV 612
            +GTRVDCLF D+YFRG VD TD  G     +RV FDDGD+R+D P ED+++PLE G RV+C+F  ++ YFDG I  DNGDATY V FDDGDVL AAPR DI++ S P H +S   +A  A+D    V    G   D  Y    H E     ++ G+  +   D NS+   A                      E G  E    +TG   +   Q                        + D G A  + R+    HD CS      V +    T S  ED G          +S G P      C+GR                +Q  S  ++P + NP+HA++EALAAA P L+ +APPDFRL A S+++ ALE+QLR+Q            EA+GE W+  +   +  L  ++ +L GR     R           GS G   G +R T  + GA APSFP + ELR++VE+LSTLR++Q                                  +ALVRLCYGD+SL+MVQA+ DLA+GYAKE LWPQ                                                                 VSNHM + ADILAR  G      G       GG   ++            GD         +R+  L FPT +R    Y++PALC S+  A  ARL++ + + +R +     + GQV R   E  L  H D++LRS  P +     +P  CGWG  +  LR  S  F DLNLKV
Sbjct:   11 KGTRVDCLFGDEYFRGKVDDTDGGGSS---YRVIFDDGDIREDAPPEDLEIPLEQGCRVECMFEGEDGYFDGVISTDNGDATYKVDFDDGDVLDAAPRHDIRVLSWP-HEESVPTNAVTAEDNYTNVTEQEGKALDTGYSNRSHNE----AESEGNREAQKNDDNSKGISAAHGELPPREETHDPPHRPQRFSEVGGSEDGYGRTGDEPAGTSQHXXXXXXXXXXXXXXXXXXXXSVNYGDNGIAQET-RDCDFGHDICSR-----VKETRSSTRSGEEDPG----------SSSGEPQRNHDSCTGRNLWGTPSNRDEPTAELVQAPS-LYVPTSPNPLHAHLEALAAAAPHLLAEAPPDFRLSATSHRIAALEEQLRQQVGGVLWPCGKGGEARGEAWHLPVFSAKTPLHPADPSLCGRPERQGRSIPEQVSAEATGSGGE--GSSRATKARGGAAAPSFPAHTELRQVVEDLSTLRMKQARSAQLAPVKLMAARETVAAAIMMSRSVFSYIAQIALVRLCYGDASLEMVQAIADLADGYAKEDLWPQASNSVVVGLSTLHRERSRSTRVHPSWVVRRAKRQGEDSVMPLFQVGDEEPTEVLAAVPSVDELLQVSNHMARAADILARDKGSRFPGTGFFIAATPGGGTYVDPRLRFEEHSGLRGDEPRGGCTEGQRARGLAFPTENRCCARYSDPALCRSITPARAARLLLELLKGLRLSVVEGGERGQVEREKFEVFLSTHEDKALRSARPRLLLEAQMPGNCGWGAALGCLRRNSPFFNDLNLKV 772          
BLAST of mRNA_A-nodosum_M_contig840.11.16 vs. uniprot
Match: A0A6H5J7A2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7A2_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 1.370e-26
Identity = 56/95 (58.95%), Postives = 73/95 (76.84%), Query Frame = 0
Query:  834 EVEVKTWQTLVAYRAQTIAQELEGQGRDLEFAEKHLLRAWEILESRHGRYHTDVGAACISLGNLAIARNRQNEAENWFRRVLENFERCFLEERTP 928
            ++E +TWQ LVAYR++ + +EL G+G++L+ AE +L+RAWEILESR GR   DVGAACISLGNLA+ R R NEA +WFRR LE FE   L  ++P
Sbjct:   20 QIEERTWQALVAYRSKVLTRELGGKGKELDTAEDYLVRAWEILESRQGRNDPDVGAACISLGNLAVIRRRLNEAIDWFRRALETFEVKRLRPQSP 114          
BLAST of mRNA_A-nodosum_M_contig840.11.16 vs. uniprot
Match: A0A835Z0D6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0D6_9STRA)

HSP 1 Score: 108 bits (271), Expect = 2.250e-24
Identity = 54/100 (54.00%), Postives = 68/100 (68.00%), Query Frame = 0
Query:   22 RVDCLFDD-DYFRGTVDATDVDGEKRDLFRVCFDDGDVRDDVPEEDMKLPLEPGIRVQCLFGDDEVYFDGAIGQDNGDATYLVKFDDGDVLVAAPRRDIQ 120
            RVDCLFDD +Y+RG+V A + DG     +R+ FDDGD+R D P  D+  PL PG RV C F  +  YF G IG DNGD TY +++DDGD L +A RRDI+
Sbjct:   10 RVDCLFDDGEYYRGSVAAANADG----TYRIVFDDGDIRHDAPLSDLLSPLLPGTRVSCYFPSEADYFPGVIGADNGDGTYHIRYDDGDELESASRRDIR 105          
BLAST of mRNA_A-nodosum_M_contig840.11.16 vs. uniprot
Match: A0A482RRR4_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RRR4_9ARCH)

HSP 1 Score: 89.4 bits (220), Expect = 2.250e-14
Identity = 115/549 (20.95%), Postives = 225/549 (40.98%), Query Frame = 0
Query:  409 VENLSTLRIRQMALVRLCYGDSSLDMVQALCDLAEGYAKEGLWPQVSNHMTKVADILARLHGPEKIDDGGAFGTREGGW-------------RNLESTCGD---TFLHNLQAEERSSKLLFPTTDRYTNPALCSSLRSAGCARLIMRVFELVRTASATSDDGQVVRVNLEALLLAHPDESLRSTGPDIFGNDLPTACGWGVVVDVLRERS---RLFVDLNLKVLEGVMPKHAGAVRIAFRRVDPEGLGIANAQEFLSELLEASHVSGFFSDADVYGLQSALKERI------EADSVPT----NINRESP----PITWEEVLALIVLAEDPHTNVGNRQTRENRGRHSLLGIRVRLLTGRSQAHTNSLPAAYSNLSTALFELKRWAHREEIGHASLAKPFSTSCVLCVSFIRHSQKSKIKAKKLAEGWV-QGDEGQDVFREECRRLLEECQRRTEVIFREEVEVKTWQTLVAYRAQTI--AQELEGQGRDLEFAEKHLLRAWEILESRHGRYHTDVGAACISLGNLAIARNRQNEAENWFRRVLENFERC 921
            +E L   R R +A+V+LCYG SS+ MV+A  DLA  YA +G W Q   H+    + L ++    K         +                 +++ + CG    +F+  L  +         T D +  P                ++F+ + T  +T       ++ L+ L  ++  E +RS+      N+      WG +V+  R +    + +VD    +L   +P+    + + FR  DP+   +A+  +  + +          S+  ++ L +A +  +         SV T    N+ ++      P+T+EE + + ++A   + +          G + +L  +V  + G    H   L  A   L  AL EL+      E+    L    +   +         +K+++ A+  AE WV + ++G+   R   R +  +   ++ +I   E+E+   +  +  R + +  + E E     LE A ++L++++EI+E  HG  H  VG AC+++ ++           +W  R +  FE+C
Sbjct:    1 MERLVEGRARVIAMVKLCYGQSSVVMVRAYIDLANAYALQGQWQQAEEHIMTALEKLVQIEAVSKQSANTQHSRKLALSAARRICVVFSCLRKHVVNNCGQIKASFVKELLHDMGDIMASTDTVDTHALPHPS-------------KLFQSLSTFFSTPSS----KLPLKQLTQSYFAE-VRSSN----SNNKTEIKTWGEIVEFFRTKCDVMKQYVDCAYTLL---LPQTKALLTLPFRLCDPQTRNLAHPVQLANAIQHFPSTLKAISNVKLHKLLAACRVEVPLLVNAHTGSVQTLPQPNVPQQGVFYELPMTFEEYICIYIVACSENID----------GMYGMLRAQVLTIKGVCSLHLQRLEVAEDVLLKALQELENVGLEGELMACELYNSIAQLMITKHHQWLDGKKTRLHAE--AETWVIEEEQGRKTVRMMLRAIKSQYDYKSNIISVAEMELMARKQAIQKRTRDLFDSDESESTKPSLEAAYRYLVKSFEIVEGVHG-VHAIVGTACVAVASVQNLLRDYENTRDWLLRAIRVFEKC 511          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig840.11.16 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FKD5_ECTSI1.010e-19440.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCV6_9PHAE9.730e-8333.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J7A2_9PHAE1.370e-2658.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z0D6_9STRA2.250e-2454.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A482RRR4_9ARCH2.250e-1420.95Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.30.140coord: 68..124
e-value: 1.7E-7
score: 32.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 181..199
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..281
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 246..267
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 212..230
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 761..940
e-value: 2.3E-9
score: 39.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig840contigA-nodosum_M_contig840:147742..165476 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig840.11.16mRNA_A-nodosum_M_contig840.11.16Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig840 147734..165495 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig840.11.16 ID=prot_A-nodosum_M_contig840.11.16|Name=mRNA_A-nodosum_M_contig840.11.16|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1240bp
MVDTITNATCIMSRSSFVQGTRVDCLFDDDYFRGTVDATDVDGEKRDLFR
VCFDDGDVRDDVPEEDMKLPLEPGIRVQCLFGDDEVYFDGAIGQDNGDAT
YLVKFDDGDVLVAAPRRDIQIASPPTHHKSAKGDADQAKDVHGYTGNLED
ACYEREGHMEEGQDGDAVGSVGSTAEDANSQEYWAHERGDMEYSEAKTGP
VDSHLKQTVPDRQHQDAGNALNSERNTSCAHDCSGGEGHGVSDGERGTYS
NREDRGDKAERTAGDDNSEGAPHFCSGRQERFIQERSPAFIPAAQNPVHA
YIEALAAATPRLMEDAPPDFRLWAVSYQMVALEDQLREQEAKGETWNDSI
LFVEGVLGGSNTLSGRKFHSRRYDNGSCGYDGGRTRGTTLKAGAVAPSFP
TNLELRKMVENLSTLRIRQMALVRLCYGDSSLDMVQALCDLAEGYAKEGL
WPQVSNHMTKVADILARLHGPEKIDDGGAFGTREGGWRNLESTCGDTFLH
NLQAEERSSKLLFPTTDRYTNPALCSSLRSAGCARLIMRVFELVRTASAT
SDDGQVVRVNLEALLLAHPDESLRSTGPDIFGNDLPTACGWGVVVDVLRE
RSRLFVDLNLKVLEGVMPKHAGAVRIAFRRVDPEGLGIANAQEFLSELLE
ASHVSGFFSDADVYGLQSALKERIEADSVPTNINRESPPITWEEVLALIV
LAEDPHTNVGNRQTRENRGRHSLLGIRVRLLTGRSQAHTNSLPAAYSNLS
TALFELKRWAHREEIGHASLAKPFSTSCVLCVSFIRHSQKSKIKAKKLAE
GWVQGDEGQDVFREECRRLLEECQRRTEVIFREEVEVKTWQTLVAYRAQT
IAQELEGQGRDLEFAEKHLLRAWEILESRHGRYHTDVGAACISLGNLAIA
RNRQNEAENWFRRVLENFERCFLEERTPVNASIEATLGKLMVGRGHQIER
GGERSPDKRASRRKLLLEVTRLLEKAATFYSERVEENLRIRSFSDTDAET
SPAAGGHIFFAPSNLDVVGSWLDPQTACFARRAAELWIQVADLHESVSGG
AVRGADGGNGDAEGGGGNGSEVDAGVRTKMLVQAARATEISRGACSVALA
KVLQKLGEVRQVTNFTVRQSYRSVRGARLAKATETTPGRERHFPAPTRSI
PIGTADKTPAPRALRLPYQPPRRPPLAERKHLKIKTTALTNRIHVYRIAI
STDASCTSGVESHPNIFLRYPGALAGACVNLQLDIQWCI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf