prot_A-nodosum_M_contig8.5.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8.5.1
Unique Nameprot_A-nodosum_M_contig8.5.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length61
Homology
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BLAST of mRNA_A-nodosum_M_contig8.5.1 vs. uniprot
Match: D7G6N9_ECTSI (Myosin 29 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6N9_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 5.950e-8
Identity = 31/58 (53.45%), Postives = 37/58 (63.79%), Query Frame = 0 
Query:    2 SVKKGRGGTNKNALAAVAQFLQGLSGGEEEPTLRDILEEQPAGFIQARDSASTAGKAI 59
            S+K G+    KN LAA+   LQGLS GEE+PTL DIL EQ   F +  DS +  GKAI
Sbjct: 2411 SMKAGKK-NGKNTLAAMTMLLQGLSDGEEDPTLEDILSEQTGEFAEEGDSVAACGKAI 2467
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G6N9_ECTSI5.950e-853.45Myosin 29 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8contigA-nodosum_M_contig8:8396..8987 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8.5.1mRNA_A-nodosum_M_contig8.5.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8 8396..8987 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8.5.1 ID=prot_A-nodosum_M_contig8.5.1|Name=mRNA_A-nodosum_M_contig8.5.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=61bp
LSVKKGRGGTNKNALAAVAQFLQGLSGGEEEPTLRDILEEQPAGFIQARD
SASTAGKAIAT
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