prot_A-nodosum_M_contig12090.1.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig12090.1.2
Unique Nameprot_A-nodosum_M_contig12090.1.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length261
Homology
BLAST of mRNA_A-nodosum_M_contig12090.1.2 vs. uniprot
Match: A0A6H5L0C0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0C0_9PHAE)

HSP 1 Score: 317 bits (813), Expect = 4.330e-104
Identity = 170/238 (71.43%), Postives = 190/238 (79.83%), Query Frame = 0
Query:   22 GCTFYSLRDHT----GDGTL-ASFDAISEIVKAGPGAATAAVQGFLKSSIAKVEELGPLGPLYFGGLYVLAEVLIIPALPLTTTAGFLFGVPGGTAVVLISATIAAVISFQLGRTLLRKQIEGLLEENPKFRVIDKAIAKEGFKIILCLRLSPIFPFALSNYLYGATSVDFLEFMGGTLIGFFPGTLAYVYGGTVGKGLMDGGGMSFPWYGNVAVIVFVAFLLKTVGDIATNAIEEIE 254
            G  +Y L DHT    G G   A+ ++  E  KAG  A + AVQ FL SS+ KVEELGPLG +YFG LYVLAEVLIIPA+PLT  AGFLFG  GGTAVVL SATIAA ISFQLGRTLLR+Q+EGLLEENPKFR +DKAIAKEGFK+IL LRLSPIFPFALSNYLYG TSVDFLE+M GTL+GFFPGTLAYVYGGT+GK + DGGG   PWYG VA     A+LLKTVG+IAT A+EE+E
Sbjct:  181 GALYYGLHDHTLGGGGGGPFSATVESAVETAKAGHSAPSTAVQAFLSSSVTKVEELGPLGVVYFGLLYVLAEVLIIPAIPLTAAAGFLFGAAGGTAVVLTSATIAAAISFQLGRTLLRQQVEGLLEENPKFRALDKAIAKEGFKVILLLRLSPIFPFALSNYLYGVTSVDFLEYMMGTLLGFFPGTLAYVYGGTLGKVVTDGGGTGLPWYGYVAGAALTAYLLKTVGEIATAAVEEME 418          
BLAST of mRNA_A-nodosum_M_contig12090.1.2 vs. uniprot
Match: A0A835ZF34_9STRA (Snare associated Golgi protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF34_9STRA)

HSP 1 Score: 233 bits (593), Expect = 6.700e-74
Identity = 121/189 (64.02%), Postives = 145/189 (76.72%), Query Frame = 0
Query:   69 VEELGPLGPLYFGGLYVLAEVLIIPALPLTTTAGFLFGVPGGTAVVLISATIAAVISFQLGRTLLRKQIEGLLEENPKFRVIDKAIAKEGFKIILCLRLSPIFPFALSNYLYGATSVDFLEFMGGTLIGFFPGTLAYVYGGTVGKGLMDGG-GMSFPWYGNVAVIVFVAFLLKTVGDIATNAIEEIEPG 256
            ++  GP+G LYFG LYV+AEVL IPALPLT ++G+LFG+ GGT VV+ SATIAA ISF LGRT LRK +E LL +N KF+ ID AI +EGFKIIL LRLSPIFPFA+SNYLYG TSV F E++G +++GF PGT+AYVYGG     L+DGG G   PWYG    +V VA  +K VGDIAT A+ EIEPG
Sbjct:    2 IQSAGPMGYLYFGALYVIAEVLAIPALPLTASSGYLFGLVGGTTVVICSATIAAGISFLLGRTFLRKWVEELLGDNAKFKAIDSAIGREGFKIILLLRLSPIFPFAISNYLYGITSVPFWEYLGASMLGFLPGTIAYVYGGGQLGSLVDGGDGGGLPWYGYALGLVAVAATIKLVGDIATKAVAEIEPG 190          
BLAST of mRNA_A-nodosum_M_contig12090.1.2 vs. uniprot
Match: A0A448YYH2_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YYH2_9STRA)

HSP 1 Score: 221 bits (564), Expect = 8.490e-67
Identity = 114/186 (61.29%), Postives = 140/186 (75.27%), Query Frame = 0
Query:   70 EELGPLGPLYFGGLYVLAEVLIIPALPLTTTAGFLFGVPGGTAVVLISATIAAVISFQLGRTLLRKQIEGLLEENPKFRVIDKAIAKEGFKIILCLRLSPIFPFALSNYLYGATSVDFLEFMGGTLIGFFPGTLAYVYGGTVGKGLM-DGGGMSFPWYGNVAVIVFVAFLLKTVGDIATNAIEEIE 254
            E +GPLG  YFG  Y +AE+L IPA+PLT +AG+LFG   GTAVVL+SA++AA +SF +GRT LR+ +EGLLEENP+F  +DKAI +EGFK++L LRLSPIFPFALSNYLYGATS++F  F GGTL+GF PGT+AYVY G VGK L  D GG ++PWY     +   A  LK V D AT  + EIE
Sbjct:  206 ESMGPLGVAYFGVAYCIAEILAIPAIPLTASAGYLFGPVQGTAVVLLSASVAAGVSFWIGRTFLREYVEGLLEENPRFGKLDKAIGREGFKLMLLLRLSPIFPFALSNYLYGATSINFSAFFGGTLLGFAPGTIAYVYTGYVGKALTGDAGGDAYPWYVYGGGLALFAAFLKVVADEATRVVREIE 391          
BLAST of mRNA_A-nodosum_M_contig12090.1.2 vs. uniprot
Match: A0A7R9WRQ5_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WRQ5_9STRA)

HSP 1 Score: 213 bits (542), Expect = 3.700e-65
Identity = 107/193 (55.44%), Postives = 141/193 (73.06%), Query Frame = 0
Query:   62 LKSSIAKVEELGPLGPLYFGGLYVLAEVLIIPALPLTTTAGFLFGVPGGTAVVLISATIAAVISFQLGRTLLRKQIEGLLEENPKFRVIDKAIAKEGFKIILCLRLSPIFPFALSNYLYGATSVDFLEFMGGTLIGFFPGTLAYVYGGTVGKGLMDGGGMSFPWYGNVAVIVFVAFLLKTVGDIATNAIEEIE 254
            L+  +  V  +GPLG +YFG  Y +AE+L IPA+PLT +AG+LFG   GT VVL+SA+IAA ISF +GRTLLR  +EG+L++ PKF  IDKAI KEGFK++  LRLSP+FPFALSNYLYGA+S++F  F  GTL+GF PGT+AYVY G VGK L   G   +PWY  V  +  ++ L+K + D AT  ++E++
Sbjct:   73 LERVVDAVASMGPLGAVYFGVAYTIAEILAIPAIPLTASAGYLFGPVQGTGVVLVSASIAAAISFLIGRTLLRDYVEGVLQDFPKFAKIDKAIGKEGFKLMFLLRLSPVFPFALSNYLYGASSINFSAFFWGTLLGFAPGTMAYVYTGYVGKALTTEGSEVYPWYFYVGGLALLSGLIKVLADTATRIVDELD 265          
BLAST of mRNA_A-nodosum_M_contig12090.1.2 vs. uniprot
Match: A0A7S1FUG6_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FUG6_9STRA)

HSP 1 Score: 209 bits (532), Expect = 3.350e-64
Identity = 107/196 (54.59%), Postives = 140/196 (71.43%), Query Frame = 0
Query:   59 QGFLKSSIAKVEELGPLGPLYFGGLYVLAEVLIIPALPLTTTAGFLFGVPGGTAVVLISATIAAVISFQLGRTLLRKQIEGLLEENPKFRVIDKAIAKEGFKIILCLRLSPIFPFALSNYLYGATSVDFLEFMGGTLIGFFPGTLAYVYGGTVGKGLMDGGGMSFPWYGNVAVIVFVAFLLKTVGDIATNAIEEIE 254
            Q  L  ++ ++E  G +G LYFG +Y +AE+L IPA+PLT +AG+LFGV  GTAVVL++A++AA +SF LGR  LR  +E +LE+NP+F+ +D AI KEGFK++L LRLSPIFPFALSNYLYG TSV F  +  GT++GF PGTLAYVY G  GK L    GM+ PWY     +   A  +K + DIAT  IE++E
Sbjct:   25 QQLLTDAVVQIEAAGAMGYLYFGVIYTIAEILAIPAIPLTASAGYLFGVLPGTAVVLVAASVAASVSFLLGRYALRGAVEKILEDNPRFKAMDAAIGKEGFKLMLLLRLSPIFPFALSNYLYGVTSVRFWPYFWGTMLGFAPGTLAYVYTGEFGKALTMDAGMAAPWYIYAGGLALGACGIKIIADIATRTIEDME 220          
BLAST of mRNA_A-nodosum_M_contig12090.1.2 vs. uniprot
Match: A0A7S4I716_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I716_9STRA)

HSP 1 Score: 213 bits (543), Expect = 5.900e-64
Identity = 115/207 (55.56%), Postives = 146/207 (70.53%), Query Frame = 0
Query:   55 TAAVQGF-------LKSSIAKVEELGPLGPLYFGGLYVLAEVLIIPALPLTTTAGFLFGVPGGTAVVLISATIAAVISFQLGRTLLRKQIEGLLEENPKFRVIDKAIAKEGFKIILCLRLSPIFPFALSNYLYGATSVDFLEFMGGTLIGFFPGTLAYVYGGTVGKGLMDGGGMSFPWYGNVAVIVFVAFLLKTVGDIATNAIEEIE 254
            T AVQ F       L++ +  VE +GP G LYFG +Y +AE+L IPA+PLT +AG+LFGV  GTAVVL SA+IAA ISF +GRTLLR  +E +LE+ PKF+ IDKAI +EGFK++L LRLSPIFPFALSNYLYGATS+ F  +  GT++GF PGT+AYVY G +GK L      + PWY     +  +A  LK V D+AT  IE ++
Sbjct:  169 TMAVQRFFSDPNASLEAVVKSVEAMGPSGFLYFGIIYTVAEILAIPAIPLTASAGYLFGVTEGTAVVLASASIAAAISFIIGRTLLRTYVESVLEDYPKFKKIDKAIGREGFKLMLLLRLSPIFPFALSNYLYGATSIGFWPYFFGTMLGFTPGTIAYVYTGEIGKALTLDSATAEPWYVYAGGMTLLAGCLKVVADVATGIIENLD 375          
BLAST of mRNA_A-nodosum_M_contig12090.1.2 vs. uniprot
Match: A0A7S1FUT1_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FUT1_9STRA)

HSP 1 Score: 209 bits (532), Expect = 1.950e-62
Identity = 107/196 (54.59%), Postives = 140/196 (71.43%), Query Frame = 0
Query:   59 QGFLKSSIAKVEELGPLGPLYFGGLYVLAEVLIIPALPLTTTAGFLFGVPGGTAVVLISATIAAVISFQLGRTLLRKQIEGLLEENPKFRVIDKAIAKEGFKIILCLRLSPIFPFALSNYLYGATSVDFLEFMGGTLIGFFPGTLAYVYGGTVGKGLMDGGGMSFPWYGNVAVIVFVAFLLKTVGDIATNAIEEIE 254
            Q  L  ++ ++E  G +G LYFG +Y +AE+L IPA+PLT +AG+LFGV  GTAVVL++A++AA +SF LGR  LR  +E +LE+NP+F+ +D AI KEGFK++L LRLSPIFPFALSNYLYG TSV F  +  GT++GF PGTLAYVY G  GK L    GM+ PWY     +   A  +K + DIAT  IE++E
Sbjct:  163 QQLLTDAVVQIEAAGAMGYLYFGVIYTIAEILAIPAIPLTASAGYLFGVLPGTAVVLVAASVAASVSFLLGRYALRGAVEKILEDNPRFKAMDAAIGKEGFKLMLLLRLSPIFPFALSNYLYGVTSVRFWPYFWGTMLGFAPGTLAYVYTGEFGKALTMDAGMAAPWYIYAGGLALGACGIKIIADIATRTIEDME 358          
BLAST of mRNA_A-nodosum_M_contig12090.1.2 vs. uniprot
Match: A0A7S0CCP1_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CCP1_9STRA)

HSP 1 Score: 203 bits (516), Expect = 3.070e-62
Identity = 101/190 (53.16%), Postives = 138/190 (72.63%), Query Frame = 0
Query:   65 SIAKVEELGPLGPLYFGGLYVLAEVLIIPALPLTTTAGFLFGVPGGTAVVLISATIAAVISFQLGRTLLRKQIEGLLEENPKFRVIDKAIAKEGFKIILCLRLSPIFPFALSNYLYGATSVDFLEFMGGTLIGFFPGTLAYVYGGTVGKGLMDGGGMSFPWYGNVAVIVFVAFLLKTVGDIATNAIEEIE 254
            ++ +++++GP G  YFG +Y +AE+L IPA+PLT +AG+LFGV  GT +VL+SA+IAA ISF +GRTLLR  +EG+L E PK + +D+AI+ +GFKI+L +R++PIFPFALSNYLYG TSV F  +  GT++GF PGT AYVY G VGK L  G   + PWY     +   +  LK  GDIA++ I+ IE
Sbjct:    3 TVTQIQDMGPSGVAYFGFIYTIAEILAIPAIPLTASAGYLFGVRDGTLIVLLSASIAASISFFIGRTLLRSYVEGILGEYPKLQKLDRAISSQGFKIMLLVRIAPIFPFALSNYLYGVTSVKFWPYFWGTMLGFAPGTFAYVYSGVVGKILTSGDDAAQPWYVYAGGLALFSGFLKIGGDIASDIIDNIE 192          
BLAST of mRNA_A-nodosum_M_contig12090.1.2 vs. uniprot
Match: A0A7S2K1V4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K1V4_9STRA)

HSP 1 Score: 207 bits (527), Expect = 3.820e-62
Identity = 104/165 (63.03%), Postives = 130/165 (78.79%), Query Frame = 0
Query:   62 LKSSIAKVEELGPLGPLYFGGLYVLAEVLIIPALPLTTTAGFLFGVPGGTAVVLISATIAAVISFQLGRTLLRKQIEGLLEENPKFRVIDKAIAKEGFKIILCLRLSPIFPFALSNYLYGATSVDFLEFMGGTLIGFFPGTLAYVYGGTVGKGLMDGGGMSFPWY 226
            L++ +++VE +G LG LYFG  Y +AE+L IPA PLT +AG+LFG+ GGT +VL+SA+IAA ISF +GRT LR  +EGLLE+ PKF+ +DKAI KEGFK+IL LRLSP+FPFALSNYLYG TSV F+E+  GTL+GF PGT+AYVY G VGK L    G + PWY
Sbjct:  156 LENIVSQVETMGNLGFLYFGIFYTIAEILAIPAFPLTCSAGYLFGLQGGTTIVLLSASIAASISFLIGRTALRSYVEGLLEKYPKFKAMDKAIGKEGFKLILLLRLSPLFPFALSNYLYGVTSVRFVEYFWGTLLGFLPGTMAYVYSGDVGKALTLDSGNAQPWY 320          
BLAST of mRNA_A-nodosum_M_contig12090.1.2 vs. uniprot
Match: K0R4C6_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R4C6_THAOC)

HSP 1 Score: 201 bits (511), Expect = 1.500e-59
Identity = 105/180 (58.33%), Postives = 134/180 (74.44%), Query Frame = 0
Query:   78 LYFGGLYVLAEVLIIPALPLTTTAGFLFGVPGGTAVVLISATIAAVISFQLGRTLLRKQIEGLLEENPKFRVIDKAIAKEGFKIILCLRLSPIFPFALSNYLYGATSVDFLEFMGGTLIGFFPGTLAYVYGGTVGKGLMDGGGMSFPWY---GNVAVIVFVAFLLKTVGDIATNAIEEIE 254
            LYFG  YVLAE+L IPA PLT  +G+LFG   GTA  L SA IAA +SF +G+TLLR  +E +L+ENPKFR +D+AI KEGFK+++ LRLSP+FPFALSNYLYGA+S+ F  +  GT++GF PGT AYVYGG +GK L  GG  + PWY   G +AVIV    L+K +GD+AT+ I+ +E
Sbjct:  167 LYFGIFYVLAEILAIPAFPLTAASGYLFGAFPGTATCLFSAAIAASVSFVIGKTLLRGYVEDVLDENPKFRSMDRAIEKEGFKLMVLLRLSPLFPFALSNYLYGASSIRFPSYFFGTILGFAPGTFAYVYGGVIGKELTVGGDSAQPWYVYAGGMAVIVG---LIKVIGDVATSVIDAME 343          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig12090.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0C0_9PHAE4.330e-10471.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZF34_9STRA6.700e-7464.02Snare associated Golgi protein-domain-containing p... [more]
A0A448YYH2_9STRA8.490e-6761.29Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7R9WRQ5_9STRA3.700e-6555.44Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S1FUG6_9STRA3.350e-6454.59Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A7S4I716_9STRA5.900e-6455.56Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A7S1FUT1_9STRA1.950e-6254.59Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A7S0CCP1_9STRA3.070e-6253.16Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S2K1V4_9STRA3.820e-6263.03Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
K0R4C6_THAOC1.500e-5958.33Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032816SNARE associated Golgi proteinPFAMPF09335SNARE_assoccoord: 92..210
e-value: 5.7E-24
score: 84.9
NoneNo IPR availablePANTHERPTHR46826FAMILY NOT NAMEDcoord: 56..254

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig12090contigA-nodosum_M_contig12090:2841..9390 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig12090.1.2mRNA_A-nodosum_M_contig12090.1.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig12090 2185..9687 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig12090.1.2 ID=prot_A-nodosum_M_contig12090.1.2|Name=mRNA_A-nodosum_M_contig12090.1.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=261bp
MKPARKSLATTVTRRVSDCRPGCTFYSLRDHTGDGTLASFDAISEIVKAG
PGAATAAVQGFLKSSIAKVEELGPLGPLYFGGLYVLAEVLIIPALPLTTT
AGFLFGVPGGTAVVLISATIAAVISFQLGRTLLRKQIEGLLEENPKFRVI
DKAIAKEGFKIILCLRLSPIFPFALSNYLYGATSVDFLEFMGGTLIGFFP
GTLAYVYGGTVGKGLMDGGGMSFPWYGNVAVIVFVAFLLKTVGDIATNAI
EEIEPGWRDD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032816SNARE_assoc