prot_A-nodosum_M_contig1162.25.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1162.25.1
Unique Nameprot_A-nodosum_M_contig1162.25.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length102
Homology
BLAST of mRNA_A-nodosum_M_contig1162.25.1 vs. uniprot
Match: D7FRQ4_ECTSI (Protein YIPF n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ4_ECTSI)

HSP 1 Score: 181 bits (458), Expect = 3.300e-54
Identity = 86/101 (85.15%), Postives = 94/101 (93.07%), Query Frame = 0
Query:    1 MFGCVATAMVLNLLGEKPIDLWKTTSVLGYCLLPVIGLAAVGIVHSLKGADGHLLGLVSVVWCTFSATRLFEEYLDMRRQRYLIAYPVGLLYACFVLITVY 101
            MFGC+ATAMVLNL+GEKPIDLWKTTSVLGYCLLPVIGLAA+GIV  L+G  GH+LG V+V WCT SATRLFEEYL+MRRQRYL+AYPVGLLYACFVLITVY
Sbjct:  245 MFGCIATAMVLNLIGEKPIDLWKTTSVLGYCLLPVIGLAAMGIVTDLRGNLGHVLGFVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY 345          
BLAST of mRNA_A-nodosum_M_contig1162.25.1 vs. uniprot
Match: A0A6H5JG11_9PHAE (Protein YIPF n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG11_9PHAE)

HSP 1 Score: 181 bits (458), Expect = 3.470e-54
Identity = 86/101 (85.15%), Postives = 94/101 (93.07%), Query Frame = 0
Query:    1 MFGCVATAMVLNLLGEKPIDLWKTTSVLGYCLLPVIGLAAVGIVHSLKGADGHLLGLVSVVWCTFSATRLFEEYLDMRRQRYLIAYPVGLLYACFVLITVY 101
            MFGC+ATAMVLNL+GEKPIDLWKTTSVLGYCLLPVIGLAA+GIV  L+G  GH+LG V+V WCT SATRLFEEYL+MRRQRYL+AYPVGLLYACFVLITVY
Sbjct:  247 MFGCIATAMVLNLIGEKPIDLWKTTSVLGYCLLPVIGLAAMGIVTDLRGNLGHVLGFVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY 347          
BLAST of mRNA_A-nodosum_M_contig1162.25.1 vs. uniprot
Match: A0A835Z6H4_9STRA (Protein YIPF n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6H4_9STRA)

HSP 1 Score: 130 bits (328), Expect = 5.340e-36
Identity = 61/100 (61.00%), Postives = 78/100 (78.00%), Query Frame = 0
Query:    2 FGCVATAMVLNLLGEKPIDLWKTTSVLGYCLLPVIGLAAVGIVHSLKGADGHLLGLVSVVWCTFSATRLFEEYLDMRRQRYLIAYPVGLLYACFVLITVY 101
            FGC A ++VLNL+G++PID W+TTSVLGYCLLPV+ L+AVGI   L G  G  L   +V W   +AT+LFE+YLDMR QR+LIAYP+GLLY CFVL+ ++
Sbjct:  126 FGCGALSLVLNLMGDRPIDAWRTTSVLGYCLLPVVLLSAVGIALDLSGRVGLALAGAAVAWSCTAATKLFEQYLDMRHQRWLIAYPIGLLYCCFVLMAIF 225          
BLAST of mRNA_A-nodosum_M_contig1162.25.1 vs. uniprot
Match: A0A7S0DM30_9EUKA (Protein YIPF n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DM30_9EUKA)

HSP 1 Score: 118 bits (295), Expect = 1.490e-31
Identity = 53/101 (52.48%), Postives = 75/101 (74.26%), Query Frame = 0
Query:    1 MFGCVATAMVLNLLGEKPIDLWKTTSVLGYCLLPVIGLAAVGIVHSLKGADGHLLGLVSVVWCTFSATRLFEEYLDMRRQRYLIAYPVGLLYACFVLITVY 101
            + GC+   ++LNL+ ++ ID+++T S+LGYCLLP++ LAA  IV +LKG  G     V+++WCT +ATR  E  LDMR QRYL+AYP+ LLY+CF LITV+
Sbjct:   79 LIGCLGMYIILNLMSDRSIDIYRTASILGYCLLPIVSLAAASIVFNLKGYIGFSTTTVTILWCTVAATRFVEATLDMRPQRYLVAYPLMLLYSCFALITVF 179          
BLAST of mRNA_A-nodosum_M_contig1162.25.1 vs. uniprot
Match: W7U1N9_9STRA (Protein YIPF n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1N9_9STRA)

HSP 1 Score: 119 bits (299), Expect = 2.510e-31
Identity = 58/99 (58.59%), Postives = 76/99 (76.77%), Query Frame = 0
Query:    3 GCVATAMVLNLLGEKPIDLWKTTSVLGYCLLPVIGLAAVGIVHSLKGADGHLLGLVSVVWCTFSATRLFEEYLDMRRQRYLIAYPVGLLYACFVLITVY 101
            GC+A  +VLNLL  K ID+W+  S+LGY LLPVIGLA +GI  SLKG  G  L  +++ W T+++TRLFE+ L+M +QRYL+AYPV L+YA FVLITV+
Sbjct:  156 GCIAMYLVLNLLSPKDIDVWRVCSILGYGLLPVIGLAFLGIAVSLKGGVGQGLATLTIAWSTYASTRLFEKALNMSQQRYLVAYPVALVYAIFVLITVF 254          
BLAST of mRNA_A-nodosum_M_contig1162.25.1 vs. uniprot
Match: A0A4S8M179_DENBC (Protein YIP n=1 Tax=Dendrothele bispora (strain CBS 962.96) TaxID=1314807 RepID=A0A4S8M179_DENBC)

HSP 1 Score: 115 bits (288), Expect = 1.160e-29
Identity = 51/101 (50.50%), Postives = 76/101 (75.25%), Query Frame = 0
Query:    1 MFGCVATAMVLNLLGEKPIDLWKTTSVLGYCLLPVIGLAAVGIVHSLKGADGHLLGLVSVVWCTFSATRLFEEYLDMRRQRYLIAYPVGLLYACFVLITVY 101
            +FG ++  ++LNL+ EK ID ++ TSVLGYCLLP++G+ AV ++ +L    G+LL L+S++WCT+SA+ +F   L M  QR L+AYPVGLLY CF L++V+
Sbjct:  153 LFGSISIYLLLNLMSEKGIDAYRVTSVLGYCLLPMVGIGAVSVMMTLDDIFGYLLALISIIWCTYSASGIFVAVLRMSDQRLLVAYPVGLLYGCFALLSVF 253          
BLAST of mRNA_A-nodosum_M_contig1162.25.1 vs. uniprot
Match: D8QC94_SCHCM (Protein YIP n=2 Tax=Schizophyllaceae TaxID=5332 RepID=D8QC94_SCHCM)

HSP 1 Score: 114 bits (285), Expect = 1.170e-29
Identity = 51/101 (50.50%), Postives = 78/101 (77.23%), Query Frame = 0
Query:    1 MFGCVATAMVLNLLGEKPIDLWKTTSVLGYCLLPVIGLAAVGIVHSLKGADGHLLGLVSVVWCTFSATRLFEEYLDMRRQRYLIAYPVGLLYACFVLITVY 101
            +FG ++  ++LNL+ E+PID ++ TSVLGYCLLP++G++AV ++ +L G  G+LL  +SV+WCT+SA+ +F   L M +QR L+AYPV LLY CF L++V+
Sbjct:  106 LFGSMSLYILLNLMSERPIDAFRVTSVLGYCLLPMVGVSAVSVMVTLDGMFGYLLSFLSVLWCTYSASGIFVSVLQMSQQRVLVAYPVLLLYGCFALLSVF 206          
BLAST of mRNA_A-nodosum_M_contig1162.25.1 vs. uniprot
Match: A0A8H5GTA2_9AGAR (Protein YIP n=1 Tax=Tetrapyrgos nigripes TaxID=182062 RepID=A0A8H5GTA2_9AGAR)

HSP 1 Score: 115 bits (287), Expect = 1.680e-29
Identity = 51/101 (50.50%), Postives = 76/101 (75.25%), Query Frame = 0
Query:    1 MFGCVATAMVLNLLGEKPIDLWKTTSVLGYCLLPVIGLAAVGIVHSLKGADGHLLGLVSVVWCTFSATRLFEEYLDMRRQRYLIAYPVGLLYACFVLITVY 101
            +FG ++  ++LNL+ EK ID ++ TSVLGYCLLP++G+ AV ++ +L G  G+LL  +S++WCT+SA+ +F   L M  QR L+AYPVGLLY CF L++V+
Sbjct:  154 LFGSMSIYLLLNLMSEKGIDAYRVTSVLGYCLLPMVGIGAVSVMITLDGMFGYLLATISILWCTYSASGIFVAVLRMSEQRLLVAYPVGLLYGCFALLSVF 254          
BLAST of mRNA_A-nodosum_M_contig1162.25.1 vs. uniprot
Match: UPI001904B571 (Yip1-domain-containing protein n=1 Tax=Cantharellus anzutake TaxID=1750568 RepID=UPI001904B571)

HSP 1 Score: 113 bits (283), Expect = 1.690e-29
Identity = 50/101 (49.50%), Postives = 75/101 (74.26%), Query Frame = 0
Query:    1 MFGCVATAMVLNLLGEKPIDLWKTTSVLGYCLLPVIGLAAVGIVHSLKGADGHLLGLVSVVWCTFSATRLFEEYLDMRRQRYLIAYPVGLLYACFVLITVY 101
            + G V+  ++LNL+ E  ID ++  SVLGYCLLP++G+ A+ +V +L+G  G+LL L+S++WCT+SA+ LF   L M  QR L+AYP+GLLY CF L++V+
Sbjct:   93 LMGSVSIYVLLNLMSESGIDAYRVASVLGYCLLPMVGVGAISVVFTLEGTIGYLLSLISILWCTYSASGLFVTVLRMSDQRLLVAYPIGLLYGCFALLSVF 193          
BLAST of mRNA_A-nodosum_M_contig1162.25.1 vs. uniprot
Match: A0A0G4FG04_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FG04_VITBC)

HSP 1 Score: 114 bits (284), Expect = 2.640e-29
Identity = 54/100 (54.00%), Postives = 76/100 (76.00%), Query Frame = 0
Query:    3 GCVATAMVLNLLGEKP-IDLWKTTSVLGYCLLPVIGLAAVGIVHSLKGADGHLLGLVSVVWCTFSATRLFEEYLDMRRQRYLIAYPVGLLYACFVLITVY 101
            GC+ T ++LNL+ +K  ID+++T S+LGY LLPV+GLAA+ I+ SL+G  G +L  + ++WCT +A+R FE  L M  QRYL+AYP+ LLY CFVLITV+
Sbjct:  133 GCLGTYLLLNLMSQKEAIDVFRTASILGYGLLPVVGLAAISIIFSLRGTLGTILSPLCIIWCTATASRFFETALLMHHQRYLVAYPICLLYTCFVLITVF 232          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1162.25.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRQ4_ECTSI3.300e-5485.15Protein YIPF n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5JG11_9PHAE3.470e-5485.15Protein YIPF n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A835Z6H4_9STRA5.340e-3661.00Protein YIPF n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A7S0DM30_9EUKA1.490e-3152.48Protein YIPF n=1 Tax=Amorphochlora amoebiformis Ta... [more]
W7U1N9_9STRA2.510e-3158.59Protein YIPF n=3 Tax=Monodopsidaceae TaxID=425072 ... [more]
A0A4S8M179_DENBC1.160e-2950.50Protein YIP n=1 Tax=Dendrothele bispora (strain CB... [more]
D8QC94_SCHCM1.170e-2950.50Protein YIP n=2 Tax=Schizophyllaceae TaxID=5332 Re... [more]
A0A8H5GTA2_9AGAR1.680e-2950.50Protein YIP n=1 Tax=Tetrapyrgos nigripes TaxID=182... [more]
UPI001904B5711.690e-2949.50Yip1-domain-containing protein n=1 Tax=Cantharellu... [more]
A0A0G4FG04_VITBC2.640e-2954.00Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006977Yip1 domainPFAMPF04893Yip1coord: 3..98
e-value: 5.3E-7
score: 29.7
NoneNo IPR availablePANTHERPTHR21236:SF2PROTEIN YIPFcoord: 1..101
IPR045231Protein Yip1/4-likePANTHERPTHR21236GOLGI MEMBRANE PROTEIN YIP1coord: 1..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1162contigA-nodosum_M_contig1162:185663..186490 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1162.25.1mRNA_A-nodosum_M_contig1162.25.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1162 185568..186521 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1162.25.1 ID=prot_A-nodosum_M_contig1162.25.1|Name=mRNA_A-nodosum_M_contig1162.25.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=102bp
MFGCVATAMVLNLLGEKPIDLWKTTSVLGYCLLPVIGLAAVGIVHSLKGA
DGHLLGLVSVVWCTFSATRLFEEYLDMRRQRYLIAYPVGLLYACFVLITV
Y*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006977Yip1_dom
IPR045231Yip1/4-like