prot_A-nodosum_M_contig11494.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig11494.1.1
Unique Nameprot_A-nodosum_M_contig11494.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length115
Homology
BLAST of mRNA_A-nodosum_M_contig11494.1.1 vs. uniprot
Match: D7FSI4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSI4_ECTSI)

HSP 1 Score: 154 bits (390), Expect = 5.130e-44
Identity = 78/113 (69.03%), Postives = 91/113 (80.53%), Query Frame = 0
Query:    2 DVMRKNTLRHTVLERGPQSPEESQALSECVFDVASVAKGHMDAAAEALETARAESGGKLPTGAFAALLPGVRAAWYLETLQKFNFEAFDESLRPRSPLWFQWRLAKAMMSERF 114
            DVMR+  LRH VLERGPQ  +E+ AL+ECVF VASVAKGH++AA E L  AR E+GGKLP GAFAALLPGVR AWYLETLQ   F AFDESLRP+SP  FQ RL +A+++E+F
Sbjct:  211 DVMRRFLLRHAVLERGPQDDKEAHALAECVFAVASVAKGHIEAAEEGLAAAREETGGKLPAGAFAALLPGVRVAWYLETLQACGFNAFDESLRPQSPFKFQLRLGRAVITEKF 323          
BLAST of mRNA_A-nodosum_M_contig11494.1.1 vs. uniprot
Match: A0A835YPK2_9STRA (Squalene/phytoene synthase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPK2_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 2.150e-22
Identity = 56/116 (48.28%), Postives = 75/116 (64.66%), Query Frame = 0
Query:    3 VMRKNTLRHTVLERGPQSPEESQALSECVFDVASVAKGHMDAAAEALETARAESGGKLPTG----AFAALLPGVRAAWYLETLQKFNFEAFDESLRPRSPLWFQWRLAKAMMSERF 114
            ++RK+ +  TVL  G ++  E++AL+ C +DVA VAKGHM            E G +L +G    AF ALLPGVRAAWYLE L+K  F AFD SL PRS + FQ+R+A+A M+ +F
Sbjct:  222 LLRKHLVASTVLFNGARTEAEAEALAACFYDVACVAKGHM------------EQGQELASGLSNDAFRALLPGVRAAWYLEALEKAGFNAFDASLTPRSWIPFQFRVARAAMTHKF 325          
BLAST of mRNA_A-nodosum_M_contig11494.1.1 vs. uniprot
Match: A0A1B6L007_9HEMI (Uncharacterized protein (Fragment) n=2 Tax=Graphocephala atropunctata TaxID=36148 RepID=A0A1B6L007_9HEMI)

HSP 1 Score: 57.4 bits (137), Expect = 2.540e-8
Identity = 37/104 (35.58%), Postives = 53/104 (50.96%), Query Frame = 0
Query:    2 DVMRKNTLRHTVLERGPQSPEESQALSECVFDVASVAKGHMDAAAEALETARAESGGKLPTGAFAALLPGVRAAWYLETLQKFNFEAFDESLRPRSPLWFQWRL 105
            DV+ ++ + H  + RG +     Q + + VFDVA+ AK H+D A    +        KLP  A   LLP    +WYLE LQK +F+ F   L+ R+ L   W L
Sbjct:   10 DVLTRHGVAHETIMRGSRD----QPVRDVVFDVATRAKQHLDKARSLQD--------KLPKEAHVLLLPAAATSWYLEKLQKLDFDVFHPKLQRRNHL-LPWTL 100          
BLAST of mRNA_A-nodosum_M_contig11494.1.1 vs. uniprot
Match: A0A804ITU8_MUSAM ((wild Malaysian banana) hypothetical protein n=3 Tax=Musa acuminata subsp. malaccensis TaxID=214687 RepID=A0A804ITU8_MUSAM)

HSP 1 Score: 56.2 bits (134), Expect = 6.820e-7
Identity = 40/108 (37.04%), Postives = 54/108 (50.00%), Query Frame = 0
Query:    2 DVMRKNTLRHTVLERGPQSPEESQALSECVFDVASVAKGHMDAAAEALETARAESGGKLPTGAFAALLPGVRAAWYLETLQKFNFEAFDESL----RPRSPLWFQWRL 105
            DV  ++ L  T   R     E  +ALS+ VF+VASVA  H+  A E            +PT A   LLP V A   L+TL++ NF  FD  +    +  SPLW+Q +L
Sbjct:  196 DVASRHGLLITAHGRSEIKMESGEALSDAVFEVASVASLHLQKARELAPA--------VPTEALPVLLPAVPAQVLLDTLRQRNFNVFDSRILGGVQGVSPLWYQLKL 295          
BLAST of mRNA_A-nodosum_M_contig11494.1.1 vs. uniprot
Match: A0A4S8KEY0_MUSBA (Uncharacterized protein n=1 Tax=Musa balbisiana TaxID=52838 RepID=A0A4S8KEY0_MUSBA)

HSP 1 Score: 55.5 bits (132), Expect = 1.490e-6
Identity = 39/108 (36.11%), Postives = 54/108 (50.00%), Query Frame = 0
Query:    2 DVMRKNTLRHTVLERGPQSPEESQALSECVFDVASVAKGHMDAAAEALETARAESGGKLPTGAFAALLPGVRAAWYLETLQKFNFEAFDESL----RPRSPLWFQWRL 105
            DV  ++ L  T   R     E  +ALS+ VF+VASVA  H+  A E            +P+ A   LLP V A   L+TL++ NF  FD  +    +  SPLW+Q +L
Sbjct:  366 DVASRHGLLITAHGRSEIKMESGEALSDAVFEVASVASLHLQKARELASA--------VPSEALPVLLPAVPAQVLLDTLRRRNFNVFDSRILGGVQGVSPLWYQLKL 465          
BLAST of mRNA_A-nodosum_M_contig11494.1.1 vs. uniprot
Match: A0A444D1P2_ENSVE (Uncharacterized protein n=2 Tax=Ensete ventricosum TaxID=4639 RepID=A0A444D1P2_ENSVE)

HSP 1 Score: 52.8 bits (125), Expect = 1.180e-5
Identity = 38/108 (35.19%), Postives = 52/108 (48.15%), Query Frame = 0
Query:    2 DVMRKNTLRHTVLERGPQSPEESQALSECVFDVASVAKGHMDAAAEALETARAESGGKLPTGAFAALLPGVRAAWYLETLQKFNFEAFDESL----RPRSPLWFQWRL 105
            DV  ++ L      R     E  +ALS+ VF+VASVA  H+  A E            +P  A   LLP V A   L+TL++ NF  FD  +    +  SPLW+Q +L
Sbjct:  208 DVASRHGLLIAAHGRSEIKMESGEALSDAVFEVASVASLHLQKARELAPA--------VPAEALPVLLPAVPAQVLLDTLRRRNFNVFDSRILGGVQGVSPLWYQLKL 307          
BLAST of mRNA_A-nodosum_M_contig11494.1.1 vs. uniprot
Match: A0A835R452_VANPL (Uncharacterized protein n=2 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835R452_VANPL)

HSP 1 Score: 52.4 bits (124), Expect = 1.580e-5
Identity = 37/109 (33.94%), Postives = 56/109 (51.38%), Query Frame = 0
Query:    1 MDVMRKNTLRHTVLERGPQSPEESQALSECVFDVASVAKGHMDAAAEALETARAESGGKLPTGAFAALLPGVRAAWYLETLQKFNFEAFDESLRPR----SPLWFQWRL 105
            ++V +K+ L  T   R     E  + L++ VF+VA+VA+ H+  + +   T        +P  A   LLP V A   L++LQK +F  FD SL       SPLW+Q +L
Sbjct:  194 VEVAKKHGLLATQNGRAGIRMESDEHLADAVFEVAAVARAHLQKSRDLAAT--------VPAEAKPILLPAVPAQVLLDSLQKAHFNVFDSSLARGVLGVSPLWYQLKL 294          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig11494.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FSI4_ECTSI5.130e-4469.03Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YPK2_9STRA2.150e-2248.28Squalene/phytoene synthase-domain-containing prote... [more]
A0A1B6L007_9HEMI2.540e-835.58Uncharacterized protein (Fragment) n=2 Tax=Graphoc... [more]
A0A804ITU8_MUSAM6.820e-737.04(wild Malaysian banana) hypothetical protein n=3 T... [more]
A0A4S8KEY0_MUSBA1.490e-636.11Uncharacterized protein n=1 Tax=Musa balbisiana Ta... [more]
A0A444D1P2_ENSVE1.180e-535.19Uncharacterized protein n=2 Tax=Ensete ventricosum... [more]
A0A835R452_VANPL1.580e-533.94Uncharacterized protein n=2 Tax=Vanilla planifolia... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR21181:SF13NADH DEHYDROGENASE (UBIQUINONE) COMPLEX I, ASSEMBLY FACTOR 6coord: 1..112
NoneNo IPR availablePANTHERPTHR21181FAMILY NOT NAMEDcoord: 1..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig11494contigA-nodosum_M_contig11494:11437..11781 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig11494.1.1mRNA_A-nodosum_M_contig11494.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig11494 1961..11781 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig11494.1.1 ID=prot_A-nodosum_M_contig11494.1.1|Name=mRNA_A-nodosum_M_contig11494.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=115bp
MDVMRKNTLRHTVLERGPQSPEESQALSECVFDVASVAKGHMDAAAEALE
TARAESGGKLPTGAFAALLPGVRAAWYLETLQKFNFEAFDESLRPRSPLW
FQWRLAKAMMSERF*
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