mRNA_A-nodosum_M_contig11494.1.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig11494.1.1
Unique NamemRNA_A-nodosum_M_contig11494.1.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig11494.1.1 vs. uniprot
Match: D7FSI4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSI4_ECTSI)

HSP 1 Score: 270 bits (689), Expect = 6.710e-86
Identity = 131/184 (71.20%), Postives = 154/184 (83.70%), Query Frame = 1 
Query:    1 GSAPGAPNPHEYCSDVVKRGDYDGYLYSLLQGSE---KAFAIRAFNVETAAIKDSVKGQSYAGRMRFQWWKDSLADIFAGDPPPQPVALALADIIKKEPGLLTRRWFDRVLDARMVDLEQAQPETLVEMETYAENTASSLLYLSLEVAGIRVGSGPGTATLGHAAGHVGKAVGICTFLRALAQP 543
            G++P   +P  +CSDVVKRGDYDGYLYSLLQG++    + AIRAFNVETAAIKDSV+G    G+MR QWWKD++AD+F G+PPP PVALALA+++  + G LTRRWFDRVLDARM DL++ QPETL EMETYAENTASSLLYLSLE+AG+R G+GPG A LGHAAGHVGKA GICT LR+LA P
Sbjct:    6 GASPAPTDPFGHCSDVVKRGDYDGYLYSLLQGAQLRPASLAIRAFNVETAAIKDSVRGNVMPGKMRMQWWKDTMADVFVGEPPPLPVALALAEVVANQKGGLTRRWFDRVLDARMADLDRTQPETLEEMETYAENTASSLLYLSLELAGVRAGAGPGAAALGHAAGHVGKAAGICTLLRSLALP 189
[Close]
BLAST of mRNA_A-nodosum_M_contig11494.1.1 vs. uniprot
Match: A0A835YPK2_9STRA (Squalene/phytoene synthase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPK2_9STRA)

HSP 1 Score: 160 bits (404), Expect = 3.510e-43
Identity = 87/195 (44.62%), Postives = 123/195 (63.08%), Query Frame = 1 
Query:    4 SAPGAPNPHEYCSDVVKRGDYDGYLYSLLQGSEKA----FAIRAFNVETAAIKDSVKGQSYAGRMRFQWWKDSLADIFAGDP-------PPQPVALALADIIKKEPGLLTRRWFDRVLDARMVDLEQAQPETLVEMETYAENTASSLLYLSLEVAGIRVGSGPGTATLGHAAGHVGKAVGICTFLRALAQPSTAR 555
            + P  PNP ++C+D+V++ DYDGYL SLL     A     A+RAFNVE A+IK++V+  + +G MR QWW D +  +++G         PP+PV +AL   +++    LTRRW +R++ AR  +LE     ++ ++ETYAE+TASSLLYLSLE AG+            HAAGH+GKAVGICT LRA+   S  +
Sbjct:   28 TVPSMPNPDQHCADIVRKADYDGYLCSLLATPRTARPSLLALRAFNVEIASIKEAVRNNTRSGTMRMQWWMDVVNAVYSGGNGGDARVLPPEPVCVALNQAVQQHG--LTRRWLERMIAARRHELEAPGWTSIADLETYAEHTASSLLYLSLEAAGVA------DERAEHAAGHIGKAVGICTLLRAVQHHSAQK 214
[Close]
BLAST of mRNA_A-nodosum_M_contig11494.1.1 vs. uniprot
Match: A0A4D9CW87_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CW87_9STRA)

HSP 1 Score: 156 bits (394), Expect = 8.210e-42
Identity = 88/179 (49.16%), Postives = 114/179 (63.69%), Query Frame = 1 
Query:    4 SAPGAPNPHEYCSDVVKRGDYDGYLYSLL--QGSEKA-FAIRAFNVETAAIKDSVKGQSYAGRMRFQWWKDSLADIFAGDPPPQPVALALADIIKKEPGLLTRRWFDRVLDARMVDLEQAQPETLVEMETYAENTASSLLYLSLEVAGIRVGSGPGTATLGHAAGHVGKAVGICTFLRA 531
            S P   N  +YC ++VK+ D+D YL  LL  + S +A FA+RAFNVETA IKD  +G +  G+MR QWW++ ++ I+ G  P  PVA AL + ++     LTRRW DR+L+AR  DL   QP  + E+E YAENTASSLLYL+LE   +R        T  HAA HVG+A GI T LRA
Sbjct:   18 SGPDPANHGQYCVELVKQHDFDAYLCGLLVPRSSRRAYFALRAFNVETALIKDVARGNTLPGQMRMQWWREVISAIYQGKSPAHPVARALCEAVQAHN--LTRRWLDRLLEAREGDLGNIQPTRMEELEDYAENTASSLLYLTLEALHVR------HPTADHAASHVGRATGIATVLRA 188
[Close]
BLAST of mRNA_A-nodosum_M_contig11494.1.1 vs. uniprot
Match: UPI001B7E142F (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 isoform X1 n=2 Tax=Acipenseroidei TaxID=186622 RepID=UPI001B7E142F)

HSP 1 Score: 149 bits (377), Expect = 4.020e-39
Identity = 86/181 (47.51%), Postives = 110/181 (60.77%), Query Frame = 1 
Query:   22 NPHEYCSDVVKRGDYDGYLYSLLQGSE---KAFAIRAFNVETAAIKDSVKGQSYAGRMRFQWWKDSLADIFAGDPPPQPVALALADIIKKEPGLLTRRWFDRVLDARMVDLEQAQPETLVEMETYAENTASSLLYLSLEVAGIRVGSGPGTATLGHAAGHVGKAVGICTFLRALAQPSTAR 555
            N  +YC D+V+  DY+G+L SLL  +E    +FA+RAFNVE A IKDSV  Q   G MR Q+WK +L DI+  DPPPQPVA+ L   + K    LT+RWF R++D R  DL     + + E+E YAEN  SSL+YL LE  G++           HAA H+GKA GI T LRA    S+ R
Sbjct:   56 NNEKYCIDLVRARDYEGFLCSLLLPAEARGSSFALRAFNVELAQIKDSVS-QKTIGLMRMQFWKKTLEDIYNDDPPPQPVAIELWKAVNKHK--LTKRWFSRIIDEREKDLNDRAYQNIQELEAYAENAQSSLIYLMLEALGVK------DVHADHAASHIGKAQGIVTCLRATPYNSSRR 227
[Close]
BLAST of mRNA_A-nodosum_M_contig11494.1.1 vs. uniprot
Match: A0A821HVL0_9NEOB ((mimic poison frog) hypothetical protein (Fragment) n=1 Tax=Ranitomeya imitator TaxID=111125 RepID=A0A821HVL0_9NEOB)

HSP 1 Score: 145 bits (365), Expect = 1.180e-38
Identity = 81/177 (45.76%), Postives = 111/177 (62.71%), Query Frame = 1 
Query:   34 YCSDVVKRGDYDGYLYSLL---QGSEKAFAIRAFNVETAAIKDSVKGQSYAGRMRFQWWKDSLADIFAGDPPPQPVALALADIIKKEPGLLTRRWFDRVLDARMVDLEQAQPETLVEMETYAENTASSLLYLSLEVAGIRVGSGPGTATLGHAAGHVGKAVGICTFLRALAQPSTAR 555
            YC+++V++ DY+G+L +LL   +     FA+RAFN+E + +KDSV  Q   G MR Q+W++S+ DI+  DPP  PVAL L   ++K    LT+RW  RV+D R  +L+      L E+ETYAENT SSLLYL+LE  G+R           HAA H+GKA GI T LRA+   S+ R
Sbjct:   30 YCAELVRKRDYEGFLCTLLLPGESQSSGFALRAFNIELSQVKDSVS-QKNLGLMRMQFWRESIDDIYKEDPPHHPVALELCKAVQKHK--LTKRWLTRVIDEREKNLDDRAYRNLQELETYAENTQSSLLYLTLETLGVR------DVHADHAASHIGKAQGIITCLRAVPFHSSKR 197
[Close]
BLAST of mRNA_A-nodosum_M_contig11494.1.1 vs. uniprot
Match: A0A8B6ZD98_ORYAF (NADH dehydrogenase (Ubiquinone) complex I, assembly factor 6 n=1 Tax=Orycteropus afer afer TaxID=1230840 RepID=A0A8B6ZD98_ORYAF)

HSP 1 Score: 148 bits (373), Expect = 1.550e-38
Identity = 84/179 (46.93%), Postives = 116/179 (64.80%), Query Frame = 1 
Query:    4 SAPGAPNPHEYCSDVVKRGDYDGYLYSLLQGSEK---AFAIRAFNVETAAIKDSVKGQSYAGRMRFQWWKDSLADIFAGDPPPQPVALALADIIKKEPGLLTRRWFDRVLDARMVDLEQAQPETLVEMETYAENTASSLLYLSLEVAGIRVGSGPGTATLGHAAGHVGKAVGICTFLRA 531
            S PGA +   YC +++++ DY+GYL SLL  +E    AFA+RAFNVE A +KDSV  ++  G+MR Q+WK+++ DI+   PP QPVA+ L   IK+    LT+RW  +++D R  +L+      + E+ETYAENT SSLLYL+LE+ GI+           HAA H+GKA GI T LRA
Sbjct:   50 SGPGASSTDLYCLELLRKRDYEGYLCSLLLPAESRSAAFALRAFNVELAQVKDSVSEKTI-GQMRMQFWKNTVEDIYCDSPPHQPVAIELWKAIKRHN--LTKRWLMKIIDEREKNLDDKMYRNIQELETYAENTQSSLLYLTLEILGIK------DLHADHAASHIGKAQGIVTCLRA 219
[Close]
BLAST of mRNA_A-nodosum_M_contig11494.1.1 vs. uniprot
Match: A0A6I9JC63_CHRAS (NADH dehydrogenase (Ubiquinone) complex I, assembly factor 6 n=1 Tax=Chrysochloris asiatica TaxID=185453 RepID=A0A6I9JC63_CHRAS)

HSP 1 Score: 147 bits (372), Expect = 1.730e-38
Identity = 87/187 (46.52%), Postives = 116/187 (62.03%), Query Frame = 1 
Query:    4 SAPGAPNPHEYCSDVVKRGDYDGYLYSLLQGSEK---AFAIRAFNVETAAIKDSVKGQSYAGRMRFQWWKDSLADIFAGDPPPQPVALALADIIKKEPGLLTRRWFDRVLDARMVDLEQAQPETLVEMETYAENTASSLLYLSLEVAGIRVGSGPGTATLGHAAGHVGKAVGICTFLRALAQPSTAR 555
            S  GA     YC +++++ DY+GYL SLL  +E    AFA+RAFNVE A +KDSV  ++  G MR Q+WKD++ DI+   PP QPVA+ L  +IKK    LT+RW  R++D R  +L+      + E+ETYAENT SSLLYL LE+ G++           HAA H+GKA GI T LRA    S+ R
Sbjct:   40 SGQGASGTSLYCMELLRKRDYEGYLCSLLLPAESRSAAFALRAFNVELAQVKDSVSEKTI-GLMRMQFWKDTVEDIYQDSPPNQPVAIELWKVIKKHN--LTKRWLLRIIDEREKNLDDKVYRNIQELETYAENTQSSLLYLILELLGVK------NLHADHAASHIGKAQGIVTCLRATPYHSSRR 217
[Close]
BLAST of mRNA_A-nodosum_M_contig11494.1.1 vs. uniprot
Match: UPI001BC8B0F4 (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 isoform X3 n=1 Tax=Taeniopygia guttata TaxID=59729 RepID=UPI001BC8B0F4)

HSP 1 Score: 146 bits (368), Expect = 2.480e-38
Identity = 82/179 (45.81%), Postives = 114/179 (63.69%), Query Frame = 1 
Query:    4 SAPGAPNPHEYCSDVVKRGDYDGYLYSLL---QGSEKAFAIRAFNVETAAIKDSVKGQSYAGRMRFQWWKDSLADIFAGDPPPQPVALALADIIKKEPGLLTRRWFDRVLDARMVDLEQAQPETLVEMETYAENTASSLLYLSLEVAGIRVGSGPGTATLGHAAGHVGKAVGICTFLRA 531
            S P A    +YC+++V++ DY+G+L SLL   +    AFA+RAFNVE A IKDS+  Q   G MR Q+W+D++ DI++ +PP QPVA  L   +K+    LT+RWF +++D R  +L+      + E+ETYAENT S+LLYL+LE  G+R           HAA H+GKA GI T LRA
Sbjct:   31 SGPAAGGAVQYCAELVRKRDYEGFLCSLLLPVESRTSAFALRAFNVELAQIKDSIT-QKTTGLMRMQFWRDAVEDIYSDNPPHQPVATELWRAVKRHN--LTKRWFMKIIDEREKNLDDRAYRNIQELETYAENTQSALLYLTLETLGVR------DIHADHAASHIGKAQGIVTCLRA 200
[Close]
BLAST of mRNA_A-nodosum_M_contig11494.1.1 vs. uniprot
Match: UPI0018D64B49 (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D64B49)

HSP 1 Score: 146 bits (369), Expect = 4.050e-38
Identity = 77/170 (45.29%), Postives = 113/170 (66.47%), Query Frame = 1 
Query:   31 EYCSDVVKRGDYDGYLYSLL---QGSEKAFAIRAFNVETAAIKDSVKGQSYAGRMRFQWWKDSLADIFAGDPPPQPVALALADIIKKEPGLLTRRWFDRVLDARMVDLEQAQPETLVEMETYAENTASSLLYLSLEVAGIRVGSGPGTATLGHAAGHVGKAVGICTFLRA 531
            +YC D+V++ DY+ +L +LL        AFA+RAFNVETA+I D+V  + + G MR Q+WKD++A I+ G PP QPVA+ L+ ++ +    L++RW  R+++AR   L+    +++ E+ETYAENT+SSLLYL+LE  G++           HAA H+GKA GI T LRA
Sbjct:   42 QYCMDLVRKSDYESFLSALLLPQSARASAFALRAFNVETASINDNVT-EKHIGLMRLQFWKDAIAKIYEGAPPQQPVAMELSRVVHRHK--LSKRWLTRIIEARAETLDAKPYQSVEELETYAENTSSSLLYLTLEALGVK------DVNADHAASHIGKAQGIVTLLRA 202
[Close]
BLAST of mRNA_A-nodosum_M_contig11494.1.1 vs. uniprot
Match: A0A6P5IQN6_PHACI (NADH dehydrogenase (Ubiquinone) complex I, assembly factor 6 isoform X2 n=1 Tax=Phascolarctos cinereus TaxID=38626 RepID=A0A6P5IQN6_PHACI)

HSP 1 Score: 147 bits (370), Expect = 4.180e-38
Identity = 83/175 (47.43%), Postives = 112/175 (64.00%), Query Frame = 1 
Query:   16 APNPHEYCSDVVKRGDYDGYLYSLLQGSE---KAFAIRAFNVETAAIKDSVKGQSYAGRMRFQWWKDSLADIFAGDPPPQPVALALADIIKKEPGLLTRRWFDRVLDARMVDLEQAQPETLVEMETYAENTASSLLYLSLEVAGIRVGSGPGTATLGHAAGHVGKAVGICTFLRA 531
            AP    YC +++++ DY+GYL  LL  +E    AFA+RAFNVE A +KDS+  Q   G+MR Q+WK ++ DI++G PP QPVA+ L   +K+    LT+RW  +++D R  +L+    + + E+ETYAENT SSLLYL LEV GIR           HAA H+GKA GI T LRA
Sbjct:   54 APGSDLYCVELLRKRDYEGYLCCLLLPAEARSSAFALRAFNVELAQVKDSIS-QKTIGQMRMQFWKKAVEDIYSGSPPHQPVAIELWKAVKRHN--LTKRWLMKIIDEREKNLDDKAYQNIQELETYAENTQSSLLYLMLEVLGIR------DLHADHAASHIGKAQGIVTCLRA 219
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig11494.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSI4_ECTSI6.710e-8671.20Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YPK2_9STRA3.510e-4344.62Squalene/phytoene synthase-domain-containing prote... [more]
A0A4D9CW87_9STRA8.210e-4249.16Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
UPI001B7E142F4.020e-3947.51NADH dehydrogenase (ubiquinone) complex I, assembl... [more]
A0A821HVL0_9NEOB1.180e-3845.76(mimic poison frog) hypothetical protein (Fragment... [more]
A0A8B6ZD98_ORYAF1.550e-3846.93NADH dehydrogenase (Ubiquinone) complex I, assembl... [more]
A0A6I9JC63_CHRAS1.730e-3846.52NADH dehydrogenase (Ubiquinone) complex I, assembl... [more]
UPI001BC8B0F42.480e-3845.81NADH dehydrogenase (ubiquinone) complex I, assembl... [more]
UPI0018D64B494.050e-3845.29NADH dehydrogenase (ubiquinone) complex I, assembl... [more]
A0A6P5IQN6_PHACI4.180e-3847.43NADH dehydrogenase (Ubiquinone) complex I, assembl... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig11494contigA-nodosum_M_contig11494:1961..11781 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FSI4
PFAMsSQS_PSY
Model size934
Max annot lvl2759|Eukaryota
KEGG koko:K18163
KEGG Pathwayko04714,map04714
Hectar predicted targeting categoryother localisation
Exons4
Evalue8.42e-45
EggNOG OGsCOG1562@1|root,KOG4411@2759|Eukaryota
Ec32 ortholog descriptionIsoprenoid synthase domain
Ec32 orthologEc-11_003830.1
Descriptionmitochondrial respiratory chain complex I assembly
Cds size345
COG categoryI
BRITEko00000,ko00001,ko03029
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866553.1791067-UTR-A-nodosum_M_contig11494:1960..20661680866553.1791067-UTR-A-nodosum_M_contig11494:1960..2066Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig11494 1961..2066 +
1680866553.1899815-UTR-A-nodosum_M_contig11494:2408..25191680866553.1899815-UTR-A-nodosum_M_contig11494:2408..2519Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig11494 2409..2519 +
1680866553.2014225-UTR-A-nodosum_M_contig11494:9179..93451680866553.2014225-UTR-A-nodosum_M_contig11494:9179..9345Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig11494 9180..9345 +
1680866553.2116969-UTR-A-nodosum_M_contig11494:11230..114361680866553.2116969-UTR-A-nodosum_M_contig11494:11230..11436Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig11494 11231..11436 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866553.2198076-CDS-A-nodosum_M_contig11494:11436..117811680866553.2198076-CDS-A-nodosum_M_contig11494:11436..11781Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig11494 11437..11781 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig11494.1.1prot_A-nodosum_M_contig11494.1.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig11494 11437..11781 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig11494.1.1

>prot_A-nodosum_M_contig11494.1.1 ID=prot_A-nodosum_M_contig11494.1.1|Name=mRNA_A-nodosum_M_contig11494.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=115bp
MDVMRKNTLRHTVLERGPQSPEESQALSECVFDVASVAKGHMDAAAEALE
TARAESGGKLPTGAFAALLPGVRAAWYLETLQKFNFEAFDESLRPRSPLW
FQWRLAKAMMSERF*
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mRNA from alignment at A-nodosum_M_contig11494:1961..11781+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig11494.1.1 ID=mRNA_A-nodosum_M_contig11494.1.1|Name=mRNA_A-nodosum_M_contig11494.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=9821bp|location=Sequence derived from alignment at A-nodosum_M_contig11494:1961..11781+ (Ascophyllum nodosum dioecious)
GGAAGCGCCCCTGGCGCCCCGAATCCCCACGAGTATTGCAGCGACGTCGT
GAAGCGCGGTGACTACGATGGGTATCTCTATAGCCTGCTCCAGGGTTCTG
AGAAAGGTGAAATCCTGCTCCTTGCAGAGCATGCTAACAGTTGAGGGCAG
CATTGACATATCTGCACCCGTTCAGACAGGTATTGAACGCACGCTGTGCG
CCGCTTGGCATGGTCTTCACGCCAATGGACCTATGTGAAGAGTTGCAGAA
GTAGAGAGGACAGTAACGCCGGTTACGATAACGTTTGAACTGTTTCTAGT
ATAATACAGTTAGTACTTCCATAAGCAATGAAGCGGGCCTAATACGAGCG
AGCGCATCAGGAGCAGCGAACTTCCAGCGCTGCCTCTCGATTTACCGGTA
CCTTACATTCAGTGTAACCTCTCGCCCACTTGTCAAGCAGGTCGGCAGCT
TTCGCTATAAGAGCCTTCAACGTGGAGACCGCGGCTATCAAAGACTCAGT
GAAGGGGCAATCTTATGCCGGAAGGATGCGTTTCCAGTGGTGGAAAGACT
CTCTGGCAGGTACAGTTTTGTCCAGTATACTCCGTAGTACATAACTCACC
GATGTCATACGAGAAAAGCTGCTGTACATGTGTACCGCTGCTGTATGTAT
GTATGCACAGTACGTATTTTTATATGCAGGTCGCCTGGTAGCTCAGAGGT
ACCATGTAACCTCTGACACGTTGGGACGTGAGTTCGATCCCGGCAAGCAG
GATTTTTCTCACTGAAAAACTAAAAAATGAAAATAAAAATGCCCAACGGG
TGGAGAACGATTAAATTGTTAGTACACAAAATTCGACTTCACGGTCGACG
AGGGAAAGGAATGGCTGAATCCTTCTCGCGAGAAAAATGAAGGCAAGCAC
CGCAGAAAGAAGGTGGATGAAACATCCTGCGTTACCTTCTTCCTGTGTGA
CCCCGGCTGGTACGTCCATTGAAGTCCAGAATGAATGGGAAGAAAACACA
CACACACACACACACATGACCGCACAATCCGGACCCTGTCACCCTAGTCA
TTCTATACCACTCGCATTGATCCTCCCAAGGGGGGATCAATGATACTTGT
ATGTATGTATGTATGTATGTATGTATGTATTTATGTGTGTATGTATGTAT
GTATGTATGGTCATCACATATAGCAAGAGCAGGATCAACGGGATAAGGTT
GCCAATCCTGCTCGTGGTCAGCTGAACAGGAAAATGAATATTTCCCTGTC
CACGTTCGCGCCTGAGAATTTGGTCTCGCGAGACGGGTTCAGCAGTCCTG
TCCCGCGTCAGCCTGCTCATTTCCATACTCAGGCTGAATCTGGTGCTGTA
TACTAATTAAGGCACGCACCGCAGAAAGAAGGTGGATAGAAATCCTGTGT
GCCTTCCTGTGTGACCCGGCTGGTACGTCCAACGAACTTGATGTCCAGAA
TGAATGGGAAGAAAATACACACACACACACACGCACATACTCGTACTGGT
CTCCCTTATATGTATACTACACTGCTGTGTACTATACCTGGTACTGTGCA
CAAGAAATCCCAATTATTTGCGCGTAGCGCGCGAATAGTGCGCGCATAAC
GCGCGTCAAGGCAACCTCGCCTTTCACATAAACTTGAAAAACTCCGACAA
ACCCTTTGAATATCCGTACCTCTACCTCTGCCGCCGGTACTTTCAACATG
CCCACTTCATACCAATAGTGGGTGTGGGAAAGAGAGGCGAATATTAATTG
GTCCATGGTGATCTGCCAAGGCAGCACCCGTTCGGAACTACCTTGAGGTT
TACTGGTCCTGTGCCGGCGGACTCTCGGCAGTGAACGCCATCGGTACGCA
ATTGCGTGACCCCATAAACTCGAGACTAACCCGATGGCGTATGGCGGTTT
CATAAATGGACGCCGCCGCGGAACTCGGGAAGAATCCCGTAAGTAAGCAC
CAGATTCAGCCTGAGGATGGAGATGAGCAGGCTAACGCGGGACGGGACGG
CTGAACCCGTCTCGCGAGACCAAATTCTCAGGCACGCACGGGGACAGCGG
AATACTATTTTCCCTGTTCAGCTGACCACGAGCAGGATTCGCAACCTTAC
CCGGTTGATCCATACTCTGCTATATGTGATGACCATACATACATACATAC
ATACCTCTTCTGTTTTCTTTAGAAAAATACGAACGCATAAAAAAAACATC
CGAGAGAATCGAGTCGAAACGCTTGGTGGGAAAACTGAAAAATCGGCTCA
TTACAACGACAGTTTACTGTTGACCCAAGCACCTTTTATTGTTATGTCTG
GTGGCTCTGCATGGCGATTAATATATGTACAGTATAACGTTGAGCTTCTC
CTGACATTATACTTTGACCCAATTTTTATTTCCATCGAGGAACCCGTTTC
AATGCCATGAAGAGGCTTTGTATTTGCAGCCTTTGATGCCACCTCAACAC
ACTAGGTTACCAATCCCACCTACTGCAACGTTGCCATTCTGCCTGCTGTG
GTCACTAAGGATCTCCCATCTCTCCCCGGTTCTCGCCTACGACTTTTTTC
GCGATGCATTTTCAGCACTCTTACACCTCGTCAACCGGATTTTTATTTTT
ATTTTTTTACTCACGTTCTCACGGAAGGCAGAATAAAAGAACGCGAGTAA
AAAAAACTGATGCTGTCGAAAATCGAACTCACGAATCCGCACTATTTCAT
ATTAACAGTTATATTATCTCGGGCGACGAGTAGTACGTACAACGAAGTTA
CCACATACCTCCGATACTTTGATCATGCTATAGCTATTAATATAACCACT
TCCTACCAATGGTGGGCGTGGGAAAGAGAGGCGCATATTAATTGGTCCAT
GGTGACCTGCAAAGGCGGCACCTGTTACTGGGACTACCTTGAGGACTACT
GGCCCTGTGCCGGCGGAATCTCGGCAGTGAACGCCATCGGTACGTAATTG
CGTGACCCGATAAACTCGGACTGACCCGATGGCGTATGACGGTTTCATAA
ATGGACGCCGCCGCGGAACTCGGGAGGAATCCCGTGAGTAAGCACCAGAT
TTAGCCTGGTCTGGAGAATGAGCAGGCTGACGCGGGACGGGGCGGCCGAA
CCCGTCTCGCGAGAGCAAATCCCCAGGCGCGAACGGGGACAGATAAATGT
TCGTTTTCCCTGTTCAGCTGACCACGAGCAGGATTGGCAACCTTACCCGG
TTGATCCGTACTCTGCTGTATGTGATGACTATAAATATATACATACATAC
CTTGTACAGAAATCGTAAATCTTGTGGGAGATTTCCTTATTTGATTTGAT
TGCTATACCCCTTTCCCTCCTCCTTCATTTTATTCCGTTGTCCTTGTCCT
TGCTTTGTCCTCCTATCTGGGCTGTCTTGCACCATTTATATATGTATATG
GTTGCCTTTCTTGCCCTACGCATATTATATGTGGTTGCCCTGGTTTGTTT
TGTTTTTGTCCCTTGTGAATCCCTCCCTGGCAAAGATGTCCTCTGCAGGC
TACTGCCTCGCCCGCTTCCTTCTGTCTGCTTTCTTTTCTTTCTTTTCTTT
TCCGACCGTGTTCGCCCTCAATTTGTTTTGGTGTAACTTCCTCTATCTTG
TGACCACAACTGGATTCGTAGCGGACCAGTTAATAATGTGAGATAAAAAC
AACGTGTGCGACTTTGTGTGTTTTTTTTTAGTTTGTCTTCTTCCTACGAT
ATAGTTGAGCCTGACAGGGGTTCTGCTCCTCTTTCATTTTTGGGTAGTTA
ACTCATTCCTTTATTTCCCTTGATTGTTGTCTCCTTCTCTCCATCTGTGT
TTTATTTCGCTGTGTGTTGCACCCGTTGCCCTTGCCATTGTCTTCATGCC
TGGGTTGTATCCCACCGCTTATAGGGCTACCTTCCCTGCGTTTTTATGCG
GTTGGCTCTAGTTTGTTTCTACTGTCTGTGTGTTTTTGTTTATGTTCTCA
ATTTTATCGCGACGATGTCCTTTGCTGGCTACTTCTTGCCCGTCCTTTTC
TGTATGCTTTCCATGCTCATCTCCGATTCCCGGTTTGATTTGGTTTGGTT
CCGTCTATCTTGTGACCACGGCTGGATTCGTAGCGGATCAGTTAATGTGA
GAAAACAACAACAACAACAACAACAACCATACGAATGTATTTGGTGGATC
TGATAAATAAAGTGATGACACCGTACACACAATTAATACGAATGTATTTG
GAAACATGCCCGTATCGGGATCAAGTTGACGTCAACTGGTTAGCTGAAGG
TGGACTGGCGGAAGCGAGTACCACCACCCATGATGTAGAGCTATTCGGAA
GTCGGGCCCATCTGCTATCAACGTTGTCATGTGGATGTGATAAGCAACAC
GAAACAAATTGTAGGCCGTGGACGACAGAGTGTCGCCCGTTCTGCGTTTC
TCGGCAAAGGTGATGCCTGCATCTTCCCTAGCTGTCCGGTACCGCATGTC
AATGTAGTCGACAAAAATCCGCTTTAACGAGTCAAGGGATATTGAGAGAT
ACCGTTTCGTAAAGCCAGTCACTAGGGTGGAACTCCCTGTTTTCTCTCCC
GCCATATTGATCCTTACCAGGTATCGATTATATTTGATAGTGAAGTAGAT
GTCTCGAGAGAGATATCGAGAAGTACCGTTTCGTAACGCCAATCACTAGG
TGGAACTCCCTGTTTCCTCTCCTGCCATATTGATCATTACCAGGTATCGA
TTGTATTTGATGGCAAAGCAGATGTCTCGAGGTTTGGAACGTAAACCCCA
CCCAGAAAGCTTTATCCATACATTTTGGCCTTAGATCGGTCCCGTAGAAA
CGAAAGCTTATCCATATGCTTTGGCCTGAGATCGGTCCCGTACGGAACGC
AGTCAAACGATGACCACCACAACTTTTGTCATCTCTCTAAAATATAGCGC
GTGCCCACTGTACCACTATTAAAAGCGGGTGTGGAAAAGAGTAACGTACA
AAAAATGGTCCACGAGGTTACCTCAATAGGCAGCATCCGCTACTCGACCT
ATTCTAAGGATTACTGGCCCTGTGCCGGCGGACTCTCGGCGGTGAACGCC
ATCGTTATGCAGTTGCGTGACCTGATAAATTCGGGACTGACCCGAGGGTG
ATTGAGGGTACAGAATGACAAGGAAGAAGGGAAGCCCCGAGGGCCGAAGC
CCAAATGGTGTAGTAGCGGGAATCGTGTACTGAGTCGAGCTAGAAGGCAA
TCTAGGGAGTGCTTTTACCGGTTGACGGACTGCCACCCTCTTGAAGAGGA
CGGAGGAATGGCGTGCCTCTATTCTTCAAGGAAACACTTGGCCGGGATCC
CAGGGTTGACTCCGAGGGTGTAAGGTGACGGGTATTTTTACCCTGGTCGT
CTTTTCTTTTACTTTTTTAAATCTCACTTATAGCCGATGGACCTCATCAT
TACCATCCTGCCCGTGGTCACTAAGGATCTTCCCATCTCTCCCGGTTCAC
GCCCTACGATTTTTTATCGCGATGCAAGTTCAGCACTCTTACAACTCGTC
AACCAATGGTTGAATTTTACTTACACACGTTCCCACGCTTACCATTACGA
AAGAAAGAACACAAATCCTACTTTGGTAAGAATCGAACTCACGACTTCCG
CACTAGCAGGTGTGCAGGTTACCTACTAGACCACTCGGGCGACTAGGGTT
ACAGGGGATAAAAAAAGAAGGAGAGGGGAGCCCGTTGTCAATAGTAAGCA
CCGGATTCAGCCTGGGTATGGAGAATGAGCGGGCTGACGTGGGAAGTTAC
GACCGCAACTGTTTCGCGAGACCAAATTCTCAGACGCGAATGGGGACAGG
AAATATTGGTAGTACTTCGTCATGAAAAAAATCGTAAGGCGTGAACCGGG
AGAGATAGAAAGATCCTTAATGACCACAGGCAGGATGGTAATGATGAGGT
CCATCGGCTATAAGTGAGATTAAAGAAAAGAAAAGAAAAAGTCCGCCCGA
ACACTTCACTCAATCCGTGTACTTGCTGGGATAAATTAAAAGGATGGACG
CGACGTGGAGAAAACCCATGTTTGTGGACTTTCTTCGTCATAGTCGTCTC
GCCATCCTCTCCTTTTCCCTATGATATCCACGTTTGCTGTGTATTCTCTT
ATTAAGCGGTGTGCGTAGTCTGCCCTTCGTTTGCTTCTATTCTCCCTGTT
TGTGCCGCTGTTGATCACGAGACGATAGCGGTTCTGTGCCACAACCAAAC
GCTTCATGTGCGGATGGATATTAATGAAACTGATTTCAACCATGAAAGAG
CAAAAGAAAAACTCCATTTAGGCCTTTATCCATTAGGCGAGCAtTTTTTT
TGTCTTATTTGGGCATAAACAGCATGTGGAAAAGCATATCTGAAAAGAGG
CAATGCTCGGCGAAAAATAGGCATAATGCGCAGCATAATAACAAGCATAA
GAGCATAAGGTGTGCTACAAAACGCATAAAGGCACGCCCCGCAGCTTTAA
CTACGCGATTATGCTTGATGCATGCCAAGTCTGAAGCGTATGATACATGA
TACTGGTACAATATATTACACATAAAACATTAATAATGCATTACACTGCT
GTACAGCATCACCGCCGCGAAAATCCACCCATTTATCGCAAACAGCAAAC
AGCAAACAACAAGCAAGCACAGAGTTCAAAATTAAAAATTAAAAAGAAAA
AGACAAAAAAGAAAGCCAGCACACGCACACACACATACACAACACACAGC
AGTACAGCAGTGACGTCGTAGAAAAAAAACGCATAATTGGATGCAAAAAC
ACAAAAAAATAGCATATGCAAGACCAAAAGCGTCACCAAAAAATAGCATA
TGCCAGAGTATAATTGCTTGTGCAACGCCTGCGATTCGTAAAAAAAATAA
GCACGAAAAAAAAAAGCAGAATGGATAAAGGCCTAACTCCATTCGAGGAA
CAAGGAGTTCCACACGATCAAAATGCGTTCTTCGCGCCGCCGTTTCCAGG
AGGACAGAGCCAACCTGAAGGCTCCTGCCTGGCATGCAAACTTAAGCGCG
CTTGAGCGAGGGCGAGCCTGAGAGCAATGAAATACCCAACCTAAAAAGCT
GTATGCGAAATTATTCGCTAGAGTAGAGTTCTAATGTTGCGTTTGCGTCC
CACTTGTGATGAAAAGGTCGTTCCCTTTGAAGCCATCACGTACCGCAGTG
CAATAGAAAATGTCGATGCATTTTCCACTCGGACAGCACCACGCCACTTG
CCACGCACCGCGTCGACAGATATTTTTGCTGGCGATCCTCCGCCGCAGCC
GGTCGCGCTTGCTTTGGCGGACATAATCAAAAAGGAGCCCGGCCTGCTGA
CGCGTCGCTGGTTCGATCGTGTCCTGGACGCAAGGATGGTCGACCTTGAG
CAAGCGCAGCCAGAAACGCTTGTGGAGATGGAAACGTGAGCCAACTTACT
CCACAAACAAGTCCAACAGCAGACAGACGCCTCGGACTGCGCTACTCGGT
CGCTGCAGACGAGCATGCTCCAAGCAATTGAAATGATTTTAAACGAAGAT
GAGCTTAGCAGCGCTAGACCTTTCAAACCTGAAGGCCTATTACCAGGGCT
CTAGAGTACAGGGGGGATACATGTATGTACGCCAATACTGTTGTAATAGT
GCGCCGTAAAGTTGTTAGTTTTTTTTGCAGTACAGTGCGATGTCGAGTGC
TTCAACGCTGTTCGTTCCGCGCTGTGTTAGCCTGTTCCACTGACTTCCAG
TTATCAAGCATCTTCGCTCTATATAATGCTTGCAGCGGAAGTCTCCAACG
CCTTTTCGATTCGTGACACCATGCAGTCGATATTGTGCTCTTGATGCCTC
GTGTTAGTGTGTGTGTGTGTCTGTGTGTTTTGTGGGACATTCTTAACTAA
ACTTTAAAGTACCCGACTTTTTCCTCCTGCCGTGCTCGTATGTATGGTCA
TCACATATAGCAAGAGCAGGATCAACGAGGTAAGGTTGCCAATCCTGCTC
GTGGTCAGCTGAACAGGGAAAATGACTATTTCCTGTCCCCGTTCGATGCC
TGAGAATTTGGTCTCGCGAGACGGGCTCAGCAGTCCCGTCCCGCGTCAGC
CTGCTCATCTCCATACTCAGGCTGAATCTGGTGCTTACTACGGATTCCTC
CCGGTTTCCGCGGTGACGTCCATTTATTGAGATACGATTCGAAACGTACT
TCGAACAAAGGATTTTTCGTTCTTGTGTGTAATGAAAATAATATTTCCTT
TGCGGTTTCTCTACACGTGAGCCCACCCCGTTGCTATCTTTATGCTTCAT
TGTCTTGAGGAACTCCGTTCACCTCTCAGAGTGTTTTTTTTGTCTCGCCA
TTATGGTATGCCCTTCGATGATGATATTTCAAGTGTTTCGTCCTCGTGAG
TATGTATGTATGTATGTATGTATGGTCACACATATAGCAAGAGTATGGAC
CAACCGGGTAAGGTTGCCAATCCTGCTCGTGGTCAGCTGAACAGGGAAAA
TTAATACTTCCCTGTCCCCGTTCGCGCCTGAGAATTTGGTCTCGCGAGAC
GGGTTCGGCAGTCCCGTCCGCGTCAGCCTGCTCATTTCCATACTCAGGCT
GAATCTGGTGCTTACTTACGGATTCCTCCCGAGTTCCGCGGCGGCGTCCA
TTTCTTTATCCAAACCGCCATACGCCATCGGGTCAGTCCCGAGTTTATCG
GGTCACGCAATTGCGTACCGATGGCGTTCAGTGCCGAGAGTCCGCTGGCA
CAGGGCCAGTAAACCACAAGGCATTTCCGAACGAGTGCTGCCTTGGCAGG
TCACCATGGACCAATTAATATGCGCCTCTCTTTCCCACACCCACTATTGG
TATGAAGTGGCCATGTTGAAAGCACCGGCGATACGTCATCGAAGGCTACA
ATAAACCTACGAATACATAAATTTTTGGTACGAGCGCGATTTCGCGATTT
TTGCAGAGGGTGAGAGGCAGAGGGCACCTAAGAGATGACAGTAAAATAAC
CACCGTGCTCCCTGTTGAAACACGCGGATGCTCAAACTTTCCAGAGTTTT
CTAAGAAAGCTGAACACGGATATTCGTTTTGTTGCATTTATAAGAAATCC
TTGTACTGATACGAAGAGACTTGCAACTGCGCCCCGGATTTGTTCCATTC
ATACTCGGAAGCGCAGTTTTGCACACGACATGGTTAAGCGACACAAAGTA
CAGTCTTCCGCAGAACCTTCGGTGCGGCATGCGGACCGCCTCGGTAGCGA
AGGATATTGTTTTATGGCCGCATCCTACCCCCCCCCCCCCCTCCCCCTTG
ATGCCCATTCCATATTTCAGCTACGCAGAGAACACGGCATCCTCGCTTTT
GTACCTGTCACTCGAAGTGGCGGGGATACGTGTCGGTTCGGGACCAGGCA
CGGCAACCTTGGGACACGCAGCAGGGCACGTGGGGAAAGCAGTCGGAATC
TGCACCtTTTTGAGGGCGCTCGCGCAGCCATCAACCGCGAGAGGAGCAAG
AGGTCGTGGACACGTGTATCCTCCCCATGGACGTGATGCGCAAGAACACG
CTGCGTCACACGGTACTGGAGCGAGGCCCTCAGAGCCCCGAGGAGTCTCA
GGCGCTCTCGGAGTGCGTTTTCGACGTGGCCTCCGTGGCGAAAGGGCACA
TGGACGCCGCGGCAGAGGCGCTGGAAACAGCGCGAGCGGAGTCTGGGGGG
AAACTGCCTACGGGCGCTTTTGCGGCGCTGCTGCCGGGGGTTCGGGCCGC
GTGGTACCTGGAGACGCTGCAGAAGTTTAACTTCGAAGCGTTCGACGAGA
GTTTGAGACCGCGAAGCCCCCTTTGGTTCCAATGGCGATTGGCCAAGGCT
ATGATGTCGGAGAGGTTTTAG
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Coding sequence (CDS) from alignment at A-nodosum_M_contig11494:1961..11781+

>mRNA_A-nodosum_M_contig11494.1.1 ID=mRNA_A-nodosum_M_contig11494.1.1|Name=mRNA_A-nodosum_M_contig11494.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=345bp|location=Sequence derived from alignment at A-nodosum_M_contig11494:1961..11781+ (Ascophyllum nodosum dioecious)
ATGGACGTGATGCGCAAGAACACGCTGCGTCACACGGTACTGGAGCGAGG
CCCTCAGAGCCCCGAGGAGTCTCAGGCGCTCTCGGAGTGCGTTTTCGACG
TGGCCTCCGTGGCGAAAGGGCACATGGACGCCGCGGCAGAGGCGCTGGAA
ACAGCGCGAGCGGAGTCTGGGGGGAAACTGCCTACGGGCGCTTTTGCGGC
GCTGCTGCCGGGGGTTCGGGCCGCGTGGTACCTGGAGACGCTGCAGAAGT
TTAACTTCGAAGCGTTCGACGAGAGTTTGAGACCGCGAAGCCCCCTTTGG
TTCCAATGGCGATTGGCCAAGGCTATGATGTCGGAGAGGTTTTAG
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