prot_A-nodosum_M_contig11456.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig11456.1.1
Unique Nameprot_A-nodosum_M_contig11456.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length346
Homology
BLAST of mRNA_A-nodosum_M_contig11456.1.1 vs. uniprot
Match: A0A6H5KSK1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSK1_9PHAE)

HSP 1 Score: 230 bits (586), Expect = 4.460e-68
Identity = 117/175 (66.86%), Postives = 132/175 (75.43%), Query Frame = 0
Query:  162 VKRSRCFDEREQASKTLSTSVALQDRGAMATSLFLFNEQYVVKPPKSSIEFGWHTDEQEQLAMCIFPPGVPPPVYVSVWLALDDCDAANGCLEVCSQPSWDSQRTRPSVDEDQPGVVCLPSKAGDAVVFLSNLWHRSGPNRTVRPRRVFYSQYATDVIRATPSDPQPLRLAVPCL 336
             +RS   DE + A +    S A  DRG     L LFNEQYVVKPP+SSIEFGWHTDE+EQLAMC+F PG  PPVYVSVWLALDDCDA NGCLEV  Q    +++  PS +ED   VVCLP+KAGDAVVFLSNLWHRSGPN+T  PRRVFY+QY  D IRA PSDP+PL LAVPC+
Sbjct:  156 AERSAAADE-DDALRNPDASGA-GDRG----ELLLFNEQYVVKPPRSSIEFGWHTDEREQLAMCVFAPGAGPPVYVSVWLALDDCDAVNGCLEVYPQARNQTRQQTPS-EEDDASVVCLPAKAGDAVVFLSNLWHRSGPNQTDNPRRVFYAQYCLDAIRAAPSDPRPLSLAVPCM 323          
BLAST of mRNA_A-nodosum_M_contig11456.1.1 vs. uniprot
Match: D7FYI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYI8_ECTSI)

HSP 1 Score: 170 bits (431), Expect = 2.190e-47
Identity = 80/113 (70.80%), Postives = 90/113 (79.65%), Query Frame = 0
Query:  224 MCIFPPGVPPPVYVSVWLALDDCDAANGCLEVCSQPSWDSQRTRPSVDEDQPGVVCLPSKAGDAVVFLSNLWHRSGPNRTVRPRRVFYSQYATDVIRATPSDPQPLRLAVPCL 336
            MC+F PG  PPVYVSVWLALDDCDA NGCLEV  Q    +++  PS +ED   VVCLP+KAGDAVVFLSNLWHRSGPN+T  PRRVFY+QY  D IRA PSDP+PL LAVPC+
Sbjct:    1 MCVFAPGARPPVYVSVWLALDDCDAVNGCLEVYPQARDQTRQQTPS-EEDDACVVCLPAKAGDAVVFLSNLWHRSGPNQTDNPRRVFYAQYCLDAIRAAPSDPRPLSLAVPCM 112          
BLAST of mRNA_A-nodosum_M_contig11456.1.1 vs. uniprot
Match: A0A329RNE0_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RNE0_9STRA)

HSP 1 Score: 138 bits (347), Expect = 9.970e-35
Identity = 72/177 (40.68%), Postives = 97/177 (54.80%), Query Frame = 0
Query:  164 RSRCFDEREQASKTLSTSVALQDRGAMATSLFLFNEQYVVKPPKSSIEFGWHTDEQEQLAMCIFPPGVPPPVYVSVWLALDDCDAANGCLEVCSQPSWDSQRTRPSVDEDQPGVVC-----LPSKAGDAVVFLSNLWHRSGPNRTVRPRRVFYSQYATDVIRATPSDPQPLRLAVPC 335
            +S+  D    AS       A+  +   +  +F FNE YVVKPP+S +EF WH D+ EQLAMC+    +PP  YVS W ALDD    NG L+  S  ++           D+  + C     + +KAGD + FLSN+WH S  N +  PRR FY+QY+ + I A P DP PL  A+PC
Sbjct:  100 KSKFVDVEMFASLLFEKLPAIAGQLMASCDMFFFNEHYVVKPPRSHVEFRWHRDDDEQLAMCVHRDEIPP--YVSAWCALDDVAEVNGALQFVSLDAFSGS--------DEENLKCHASEPVAAKAGDVLFFLSNVWHYSSSNESDGPRRAFYAQYSRERITARPKDPSPLSFAIPC 266          
BLAST of mRNA_A-nodosum_M_contig11456.1.1 vs. uniprot
Match: A0A2P4YTF9_9STRA (Uncharacterized protein n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YTF9_9STRA)

HSP 1 Score: 136 bits (342), Expect = 6.570e-34
Identity = 68/157 (43.31%), Postives = 91/157 (57.96%), Query Frame = 0
Query:  182 VALQDRGAMATSLFLFNEQYVVKPPKSSIEFGWHTDEQEQLAMCIFPPGVPPPVYVSVWLALDDCDAANGCLEVCSQPSWDSQRTRPSVDEDQPGVVCLPSKAGDAVVFLSNLWHRSGPNRTVRPRRVFYSQYATDVIRATPSDPQPLRLAVPCLCM 338
            +A +D     T +F FNE YVVKPP+S +EF WH D+ EQLAMC+    + P  YVS W ALDD  + NG L+  S          PS DE+      + +KAGD + F+SN+WH S  N +   RR FY+QY+ + I A P+D  PL  A+PC  +
Sbjct:  150 MAARDESQTKTGIFFFNEHYVVKPPRSQVEFRWHRDDDEQLAMCVHRESIHP--YVSAWCALDDVTSLNGALQFVSLDV-------PSGDEESFFSEPVTAKAGDVIFFMSNVWHCSSSNESDGVRRAFYAQYSHETITARPNDSAPLSFAIPCRAL 297          
BLAST of mRNA_A-nodosum_M_contig11456.1.1 vs. uniprot
Match: H3GIQ3_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GIQ3_PHYRM)

HSP 1 Score: 132 bits (331), Expect = 2.490e-32
Identity = 65/142 (45.77%), Postives = 83/142 (58.45%), Query Frame = 0
Query:  194 LFLFNEQYVVKPPKSSIEFGWHTDEQEQLAMCIFPPGVPPPVYVSVWLALDDCDAANGCLEVCSQPSWDSQRTRPSVDEDQPGVVCLPSKAGDAVVFLSNLWHRSGPNRTVRPRRVFYSQYATDVIRATPSDPQPLRLAVPC 335
            +F FNE YVVKPPKS +EF WH D+ EQLAMC+    + P  YVS W ALDD  +ANG L+  S                      +P+KAGD + FLSN+WH S  N +  PRR FY+QY+++ I A P +  PL  A+PC
Sbjct:  133 VFFFNEHYVVKPPKSHVEFRWHRDDDEQLAMCVDRETIRP--YVSAWCALDDVSSANGALQFVSLDESGDLGEETVEKLQLRACAPVPAKAGDVLFFLSNVWHCSSSNESDAPRRAFYAQYSSEKITARPKEVTPLSFAIPC 272          
BLAST of mRNA_A-nodosum_M_contig11456.1.1 vs. uniprot
Match: A0A5D6Y8T2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y8T2_9STRA)

HSP 1 Score: 133 bits (335), Expect = 1.230e-31
Identity = 75/182 (41.21%), Postives = 99/182 (54.40%), Query Frame = 0
Query:  175 SKTLSTSVALQDRGAMATSLFLFNEQYVVKPPKSSIEFGWHTDEQEQLAMCIFPPGVPPPVYVSVWLALDDCDAANGCLEVCSQPSWDS-QRTRPSVDEDQPGVVC----------LPSKAGDAVVFLSNLWHRSGPNRTVRPRRVFYSQYATDVIRATPSDPQPLRLAVPCLCMEDRDQKG 345
            SK+ +T+       A+   L+ FNE YVVKPP+S++EF WH D+ EQLAMC+    VPP  YVS W ALDD   ANG L   SQ   +    T    DE+   + C          + + AG  V FLS++WH S  N +   RR FY+QY+   I A+ SDP PL  A+PCL     + +G
Sbjct:  138 SKSDATTRRRVSGAALNDQLYFFNEHYVVKPPRSAVEFRWHQDDAEQLAMCVHRAAVPP--YVSAWCALDDVTTANGPLRFVSQSRLNGVASTWGDSDEEVDSIPCAALDAVASGPIVASAGTVVFFLSDVWHCSSSNGSDAVRRAFYAQYSPVRITASASDPWPLSFAIPCLLPRPAEHQG 317          
BLAST of mRNA_A-nodosum_M_contig11456.1.1 vs. uniprot
Match: A0A3M6V7U2_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V7U2_9STRA)

HSP 1 Score: 129 bits (323), Expect = 3.210e-31
Identity = 69/161 (42.86%), Postives = 88/161 (54.66%), Query Frame = 0
Query:  182 VALQDRGAMATSLFLFNEQYVVKPPKSSIEFGWHTDEQEQLAMCIFPPGVPPPVYVSVWLALDDCDAANGCLEVCSQPSWDSQRTRPSVDEDQPGVVCLPSK------AGDAVVFLSNLWHRSGPNRTVRPRRVFYSQYATDVIRATPSDPQPLRLAVPCL 336
            +A  D+  +AT +F  NE YV+KPPKS +EF WH D+ EQLAMC+    +    YVSVW ALDD    NG L   S          P  D+D      L +       AGD V FLSN+WH S  N +   RR FY+QY+ + I + P DP PL  A+PC+
Sbjct:  121 LAAFDKSEVATDMFFSNEHYVIKPPKSHVEFRWHRDDDEQLAMCVHRESIH--TYVSVWCALDDVTTVNGPLRFVSL------NVLPESDKDNVESRKLHASGPVTAAAGDVVFFLSNVWHCSSSNESNTFRRAFYAQYSRETITSRPKDPSPLSFAIPCI 273          
BLAST of mRNA_A-nodosum_M_contig11456.1.1 vs. uniprot
Match: W2RFZ8_PHYPN (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2RFZ8_PHYPN)

HSP 1 Score: 129 bits (323), Expect = 3.280e-31
Identity = 64/153 (41.83%), Postives = 86/153 (56.21%), Query Frame = 0
Query:  186 DRGAMATSLFLFNEQYVVKPPKSSIEFGWHTDEQEQLAMCIFPPGVPPPVYVSVWLALDDCDAANGCLEVCSQPSW---DSQRTRPSVDEDQPGVVCLPSKAGDAVVFLSNLWHRSGPNRTVRPRRVFYSQYATDVIRATPSDPQPLRLAVPC 335
            ++    T +F FNE YVVKPP+S +EF WH D+ EQLAMC+    +P   Y+S W ALDD    NG L+          D +  +    E       + +KAGD + FLSN+WH S  N +   RR FY+QY+ + I A P+DP PL  A+PC
Sbjct:  125 EKAETGTDMFFFNEHYVVKPPRSHVEFRWHRDDDEQLAMCVHRDEIP--AYISAWCALDDVTEVNGALQFVPLDELSGSDEESLKRHASEP------MTAKAGDVLFFLSNVWHFSSSNESDGARRAFYAQYSRERITARPNDPSPLSFAIPC 269          
BLAST of mRNA_A-nodosum_M_contig11456.1.1 vs. uniprot
Match: A0A6A4A515_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A4A515_9STRA)

HSP 1 Score: 127 bits (320), Expect = 1.130e-30
Identity = 65/144 (45.14%), Postives = 83/144 (57.64%), Query Frame = 0
Query:  192 TSLFLFNEQYVVKPPKSSIEFGWHTDEQEQLAMCIFPPGVPPPVYVSVWLALDDCDAANGCLEVCSQPSWDSQRTRPSVDEDQPGVVCLPSKAGDAVVFLSNLWHRSGPNRTVRPRRVFYSQYATDVIRATPSDPQPLRLAVPC 335
            T +F FNE YVVKPPKS +EF WH D+ EQLAM +    + P  YVS W ALDD   ANG L+  S             +  +     + +KAGD + FLSN+WH S  N +  PRR FY+QY+ + I A P+D  PL  A+PC
Sbjct:  135 TEVFFFNEHYVVKPPKSHVEFRWHRDDDEQLAMSVHRETIVP--YVSAWCALDDVTEANGALQFVSLDGPSELGNDKVENLQRRASEPVTAKAGDVLFFLSNVWHCSSSNESDAPRRAFYAQYSRERITARPTDAVPLSFAIPC 276          
BLAST of mRNA_A-nodosum_M_contig11456.1.1 vs. uniprot
Match: A0A836CGX5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGX5_9STRA)

HSP 1 Score: 129 bits (323), Expect = 3.810e-30
Identity = 75/150 (50.00%), Postives = 86/150 (57.33%), Query Frame = 0
Query:  194 LFLFNEQYVVKPPKSSIEFGWHTDEQEQLAMCIF--PPGVPPPVYVSVWLALDDCDAANGCLEVCSQPSWDSQRTRPSVD--EDQPGVVCLPSKAGDAVVFLSNLWHRSGPNRTVRPRRVFYSQYATDVIRATPSDPQPLRLAVPCLCME 339
            L LFNEQY+ KPP+S++ F WH D  EQLAM +   P   P   Y SVW+ALDD  A NGCL V   P+  S    P  D        V LP +AGDAV F S+LWH SGPN T R RR FY+QY+   I A  S   PL  AVPC   E
Sbjct:  139 LVLFNEQYICKPPRSAVNFRWHRDADEQLAMVLATAPHQAPALHYYSVWVALDDAAADNGCLVVL--PASSSAHAAPEQDGAAADAEAVALPVRAGDAVAFTSDLWHCSGPNVTRRARRAFYAQYSAAPIMAGGS---PLSFAVPCTDFE 283          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig11456.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSK1_9PHAE4.460e-6866.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYI8_ECTSI2.190e-4770.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A329RNE0_9STRA9.970e-3540.68Uncharacterized protein n=1 Tax=Phytophthora cacto... [more]
A0A2P4YTF9_9STRA6.570e-3443.31Uncharacterized protein n=2 Tax=Phytophthora palmi... [more]
H3GIQ3_PHYRM2.490e-3245.77Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A5D6Y8T2_9STRA1.230e-3141.21Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A3M6V7U2_9STRA3.210e-3142.86Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
W2RFZ8_PHYPN3.280e-3141.83Uncharacterized protein n=10 Tax=Phytophthora TaxI... [more]
A0A6A4A515_9STRA1.130e-3045.14Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A836CGX5_9STRA3.810e-3050.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.620q2cbj1_9rhob like domaincoord: 162..332
e-value: 2.8E-28
score: 100.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..114
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..56
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..105
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..56
NoneNo IPR availablePANTHERPTHR20883:SF34PHYTANOYL-COA DIOXYGENASEcoord: 280..338
coord: 189..259
NoneNo IPR availablePANTHERPTHR20883PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1coord: 280..338
coord: 189..259
NoneNo IPR availableSUPERFAMILY51197Clavaminate synthase-likecoord: 194..322
IPR008775Phytanoyl-CoA dioxygenasePFAMPF05721PhyHcoord: 198..309
e-value: 8.9E-16
score: 58.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig11456contigA-nodosum_M_contig11456:4035..6738 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig11456.1.1mRNA_A-nodosum_M_contig11456.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig11456 3970..7014 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig11456.1.1 ID=prot_A-nodosum_M_contig11456.1.1|Name=mRNA_A-nodosum_M_contig11456.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=346bp
MTKYMSRRNNGNRHLRGKGPLLSTAGAGQKPATDQGKVLTSTDDERGTAT
DGWSEHHASTVQGAIFQTLARLAMDALAAHRSARENINPRNSQRASNNSP
APNPSSCGFDGAIATAAGAEPSPYHANVNPFATPTFFGVPPSNHSIADRC
GSAECEPPVSGVKRSRCFDEREQASKTLSTSVALQDRGAMATSLFLFNEQ
YVVKPPKSSIEFGWHTDEQEQLAMCIFPPGVPPPVYVSVWLALDDCDAAN
GCLEVCSQPSWDSQRTRPSVDEDQPGVVCLPSKAGDAVVFLSNLWHRSGP
NRTVRPRRVFYSQYATDVIRATPSDPQPLRLAVPCLCMEDRDQKG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008775Phytyl_CoA_dOase