prot_A-nodosum_M_contig114.8.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig114.8.1
Unique Nameprot_A-nodosum_M_contig114.8.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length101
Homology
BLAST of mRNA_A-nodosum_M_contig114.8.1 vs. uniprot
Match: A0A6H5L5E9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5E9_9PHAE)

HSP 1 Score: 175 bits (443), Expect = 1.810e-53
Identity = 83/99 (83.84%), Postives = 90/99 (90.91%), Query Frame = 0
Query:    2 AVAPFWVEPTKLILDPILLFFELAFVARIILSWYPALDLNKVPQNLVAWPTEPILKPTRAIVPPAFGVDVSPIVWVMICSFLHEILLGQQGILNLISNK 100
            A AP WV PTKL+LDP LLFFE AFVARI+LSWYP LDLN  PQNLVAWPTEPIL+PTRAI+PPAFGVD+SPIVWVMICS +HEILLGQQGILNL+SNK
Sbjct:  123 AEAPAWVGPTKLVLDPTLLFFEFAFVARIVLSWYPKLDLNSAPQNLVAWPTEPILRPTRAIIPPAFGVDISPIVWVMICSLVHEILLGQQGILNLMSNK 221          
BLAST of mRNA_A-nodosum_M_contig114.8.1 vs. uniprot
Match: D8LHQ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ4_ECTSI)

HSP 1 Score: 175 bits (443), Expect = 2.300e-53
Identity = 83/99 (83.84%), Postives = 90/99 (90.91%), Query Frame = 0
Query:    2 AVAPFWVEPTKLILDPILLFFELAFVARIILSWYPALDLNKVPQNLVAWPTEPILKPTRAIVPPAFGVDVSPIVWVMICSFLHEILLGQQGILNLISNK 100
            A AP WV PTKL+LDP LL+FE AFVARI+LSWYP LDLN  PQNLVAWPTEPILKPTRAI+PPAFGVD+SPIVWVMICS +HEILLGQQGILNL+SNK
Sbjct:  131 AEAPAWVGPTKLVLDPTLLYFEFAFVARIVLSWYPKLDLNSAPQNLVAWPTEPILKPTRAIIPPAFGVDISPIVWVMICSLVHEILLGQQGILNLMSNK 229          
BLAST of mRNA_A-nodosum_M_contig114.8.1 vs. uniprot
Match: A0A836CA21_9STRA (YGGT family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA21_9STRA)

HSP 1 Score: 151 bits (382), Expect = 1.290e-44
Identity = 71/99 (71.72%), Postives = 81/99 (81.82%), Query Frame = 0
Query:    2 AVAPFWVEPTKLILDPILLFFELAFVARIILSWYPALDLNKVPQNLVAWPTEPILKPTRAIVPPAFGVDVSPIVWVMICSFLHEILLGQQGILNLISNK 100
            A  P WV PT+  LDP LL+ E AF+ RI+LSWYP  DLNK PQNLVAWPTEPILKPTRA+VPPAFGVD+SPIVWVMI SF+ EIL GQQGI N++S +
Sbjct:   91 ADVPGWVGPTRAALDPFLLYMEFAFLCRIVLSWYPQTDLNKAPQNLVAWPTEPILKPTRAVVPPAFGVDISPIVWVMILSFVREILFGQQGIFNMLSQQ 189          
BLAST of mRNA_A-nodosum_M_contig114.8.1 vs. uniprot
Match: A0A7S2V560_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V560_9STRA)

HSP 1 Score: 135 bits (340), Expect = 2.010e-38
Identity = 63/99 (63.64%), Postives = 79/99 (79.80%), Query Frame = 0
Query:    2 AVAPFWVEPTKLILDPILLFFELAFVARIILSWYPALDLNKVPQNLVAWPTEPILKPTRAIVPPAFGVDVSPIVWVMICSFLHEILLGQQGILNLISNK 100
            A AP WV PTKLILDP+L    LA +AR++LSWYP++ L+K P + +  PTEP+L+ TR +VPPAFGVDVSPIVW+MI SF HEILLGQQG+L ++ NK
Sbjct:   78 AAAPVWVAPTKLILDPLLNIVSLAMLARVVLSWYPSISLDKAPFSYLKAPTEPVLQVTREVVPPAFGVDVSPIVWIMISSFFHEILLGQQGLLTILQNK 176          
BLAST of mRNA_A-nodosum_M_contig114.8.1 vs. uniprot
Match: A0A7S3UWL9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWL9_HETAK)

HSP 1 Score: 133 bits (335), Expect = 1.330e-37
Identity = 61/97 (62.89%), Postives = 77/97 (79.38%), Query Frame = 0
Query:    2 AVAPFWVEPTKLILDPILLFFELAFVARIILSWYPALDLNKVPQNLVAWPTEPILKPTRAIVPPAFGVDVSPIVWVMICSFLHEILLGQQGILNLIS 98
            A  P WVEPT  +L P L  F LA +ARI+LSWYP++DLN+ P NLVAWPTEP+L  TR +VPPAFGVD+SPIVW+M+ SF++E+ LG QGIL L++
Sbjct:   78 AEVPAWVEPTSTVLGPFLAVFSLAMLARIVLSWYPSIDLNEAPFNLVAWPTEPLLAFTRGVVPPAFGVDISPIVWLMVASFVNEVALGPQGILTLLA 174          
BLAST of mRNA_A-nodosum_M_contig114.8.1 vs. uniprot
Match: W7TNB9_9STRA (Integral membrane protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNB9_9STRA)

HSP 1 Score: 122 bits (306), Expect = 2.410e-33
Identity = 55/100 (55.00%), Postives = 72/100 (72.00%), Query Frame = 0
Query:    1 MAVAPFWVEPTKLILDPILLFFELAFVARIILSWYPALDLNKVPQNLVAWPTEPILKPTRAIVPPAFGVDVSPIVWVMICSFLHEILLGQQGILNLISNK 100
            +  A  WV P K +++P+L    +AF+ RI+LSWYP +DLNK+P NL+AWPTEP L  TR +VPPAFGVD+SPI+W    +FL EIL+  QGIL L+  K
Sbjct:   71 LLAASSWVSPAKAVIEPLLDLGGVAFLVRIVLSWYPQVDLNKLPANLIAWPTEPFLSVTRLVVPPAFGVDISPIIWFAFLNFLREILVSDQGILTLLQQK 170          
BLAST of mRNA_A-nodosum_M_contig114.8.1 vs. uniprot
Match: A0A7S2PCB6_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PCB6_9STRA)

HSP 1 Score: 122 bits (306), Expect = 2.700e-33
Identity = 53/90 (58.89%), Postives = 70/90 (77.78%), Query Frame = 0
Query:    7 WVEPTKLILDPILLFFELAFVARIILSWYPALDLNKVPQNLVAWPTEPILKPTRAIVPPAFGVDVSPIVWVMICSFLHEILLGQQGILNL 96
            WVEP K +LDP L     A + R+++SWYP  ++N+VP N+V WPTEP+L+ TR +VPPAFGVD+SPIVW+ + +FLHEI LGQQG+L L
Sbjct:   79 WVEPLKNVLDPSLNLLSFAMLCRVVISWYPETNVNEVPYNIVVWPTEPLLRVTRGVVPPAFGVDISPIVWLGVFTFLHEIFLGQQGLLTL 168          
BLAST of mRNA_A-nodosum_M_contig114.8.1 vs. uniprot
Match: A0A7S2GHS6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GHS6_9STRA)

HSP 1 Score: 122 bits (305), Expect = 3.420e-33
Identity = 50/91 (54.95%), Postives = 69/91 (75.82%), Query Frame = 0
Query:    7 WVEPTKLILDPILLFFELAFVARIILSWYPALDLNKVPQNLVAWPTEPILKPTRAIVPPAFGVDVSPIVWVMICSFLHEILLGQQGILNLI 97
            W  PT+ I DP+LL  +   + R+I+SWYP ++LNK+P N++ WPTEP L+PTR ++PPAFGVD+SPIVW+ I SF  EI  GQQG+ N++
Sbjct:   80 WAGPTRAICDPLLLVGQTVMLFRVIISWYPEINLNKLPYNIITWPTEPFLRPTRKVIPPAFGVDISPIVWIAILSFFREIFFGQQGVFNML 170          
BLAST of mRNA_A-nodosum_M_contig114.8.1 vs. uniprot
Match: A0A7S1FZ37_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FZ37_9STRA)

HSP 1 Score: 120 bits (301), Expect = 1.340e-32
Identity = 53/90 (58.89%), Postives = 71/90 (78.89%), Query Frame = 0
Query:    7 WVEPTKLILDPILLFFELAFVARIILSWYPALDLNKVPQNLVAWPTEPILKPTRAIVPPAFGVDVSPIVWVMICSFLHEILLGQQGILNL 96
            WV P + +LDP+L     A + RI++SWYP  +L+ +P +L  WPTEP+L+PTRA+VPPAFGVD+SP+VW+ I +FLHEILLGQQG+L L
Sbjct:   74 WVVPLQSVLDPLLNLLSFAMLCRIVISWYPNTNLSTLPYSLAVWPTEPLLRPTRAVVPPAFGVDISPMVWLGIFTFLHEILLGQQGLLTL 163          
BLAST of mRNA_A-nodosum_M_contig114.8.1 vs. uniprot
Match: A0A7S3W2L2_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3W2L2_9SPIT)

HSP 1 Score: 120 bits (301), Expect = 1.680e-32
Identity = 56/94 (59.57%), Postives = 67/94 (71.28%), Query Frame = 0
Query:    7 WVEPTKLILDPILLFFELAFVARIILSWYPALDLNKVPQNLVAWPTEPILKPTRAIVPPAFGVDVSPIVWVMICSFLHEILLGQQGILNLISNK 100
            WV PTKL+L P+   F L F+ R ILSW+P  DLN  P N+ AWPTEPILK TR ++PP  GVD++PIVWV I SF  EILLG QG+L +I  K
Sbjct:   80 WVGPTKLVLGPLFTIFTLLFLFRTILSWFPKYDLNAFPYNIAAWPTEPILKGTRKVIPPVAGVDITPIVWVAIISFFSEILLGPQGLLTIIQRK 173          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig114.8.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L5E9_9PHAE1.810e-5383.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHQ4_ECTSI2.300e-5383.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CA21_9STRA1.290e-4471.72YGGT family-domain-containing protein n=1 Tax=Trib... [more]
A0A7S2V560_9STRA2.010e-3863.64Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3UWL9_HETAK1.330e-3762.89Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
W7TNB9_9STRA2.410e-3355.00Integral membrane protein n=2 Tax=Nannochloropsis ... [more]
A0A7S2PCB6_9STRA2.700e-3358.89Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2GHS6_9STRA3.420e-3354.95Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1FZ37_9STRA1.340e-3258.89Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S3W2L2_9SPIT1.680e-3259.57Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003425CCB3/YggTPFAMPF02325YGGTcoord: 18..87
e-value: 2.7E-15
score: 56.5
IPR003425CCB3/YggTPANTHERPTHR33219YLMG HOMOLOG PROTEIN 2, CHLOROPLASTICcoord: 13..99
NoneNo IPR availablePANTHERPTHR33219:SF11PROTEIN COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, CHLOROPLASTICcoord: 13..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig114contigA-nodosum_M_contig114:146888..152429 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig114.8.1mRNA_A-nodosum_M_contig114.8.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig114 146358..152550 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig114.8.1 ID=prot_A-nodosum_M_contig114.8.1|Name=mRNA_A-nodosum_M_contig114.8.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=101bp
MAVAPFWVEPTKLILDPILLFFELAFVARIILSWYPALDLNKVPQNLVAW
PTEPILKPTRAIVPPAFGVDVSPIVWVMICSFLHEILLGQQGILNLISNK
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003425CCB3/YggT