prot_A-nodosum_M_contig1124.15.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1124.15.1
Unique Nameprot_A-nodosum_M_contig1124.15.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length105
Homology
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BLAST of mRNA_A-nodosum_M_contig1124.15.1 vs. uniprot
Match: A0A6H5JMW0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMW0_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 3.900e-6
Identity = 26/55 (47.27%), Postives = 33/55 (60.00%), Query Frame = 0 
Query:    8 LEQGKEVCLPYAALDMRVDKTCPLYWVTWEVDREADAIEIIVPKLPQKASRETIL 62
            L+ G E C P AAL +RVDKTCP+YW  W    +AD    I   +PQ+ +R  IL
Sbjct:   26 LDPGTERCTPEAALYLRVDKTCPIYWTRWNKKSKADLD--ICCDIPQRGTRVKIL 78
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BLAST of mRNA_A-nodosum_M_contig1124.15.1 vs. uniprot
Match: D7FYZ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYZ0_ECTSI)

HSP 1 Score: 53.5 bits (127), Expect = 5.140e-6
Identity = 27/55 (49.09%), Postives = 33/55 (60.00%), Query Frame = 0 
Query:    8 LEQGKEVCLPYAALDMRVDKTCPLYWVTWEVDREADAIEIIVPKLPQKASRETIL 62
            LE G E C P AAL +RVDKTCP+YW  W    +AD    I   +PQ+ +R  IL
Sbjct:  400 LEPGTERCTPEAALYLRVDKTCPIYWTRWNKKSKADLD--ICCDIPQRGTRVKIL 452
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1124.15.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JMW0_9PHAE3.900e-647.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYZ0_ECTSI5.140e-649.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1124contigA-nodosum_M_contig1124:143940..144254 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1124.15.1mRNA_A-nodosum_M_contig1124.15.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1124 143940..144254 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1124.15.1 ID=prot_A-nodosum_M_contig1124.15.1|Name=mRNA_A-nodosum_M_contig1124.15.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=105bp
ATILTNTLEQGKEVCLPYAALDMRVDKTCPLYWVTWEVDREADAIEIIVP
KLPQKASRETILKILTGSIHGTQHPVVGSRVCQRRRDRGRDAAGNALIVS
PGKTV
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