prot_A-nodosum_M_contig1110.6.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1110.6.1
Unique Nameprot_A-nodosum_M_contig1110.6.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length117
Homology
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BLAST of mRNA_A-nodosum_M_contig1110.6.1 vs. uniprot
Match: D7FMC6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMC6_ECTSI)

HSP 1 Score: 156 bits (394), Expect = 3.900e-47
Identity = 81/114 (71.05%), Postives = 96/114 (84.21%), Query Frame = 0 
Query:    3 SRPLQDAQDFLAEGIFRSLLGGVTEIIATTDGLAKTQDALLATSQALLEELRLHDTAHQADVINGRVEKIRETSAALSRIAGRLAALRRRADILEADLEADGCVAGNNMGELRL 116
            +R L+DA+D LAEGIFRSL+GGVT++IATTD LA+TQD LLATS+ LLEELRLHDTA QAD I  R +KIR+T AAL R+  RLAALRRRA +LEA+LEADGCVAG+ + EL L
Sbjct:    4 ARSLEDAEDMLAEGIFRSLIGGVTDMIATTDRLARTQDDLLATSRGLLEELRLHDTARQADAIEARADKIRQTCAALERVTDRLAALRRRAQVLEAELEADGCVAGDGVSELCL 117
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BLAST of mRNA_A-nodosum_M_contig1110.6.1 vs. uniprot
Match: A0A6H5J974_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J974_9PHAE)

HSP 1 Score: 139 bits (350), Expect = 1.620e-40
Identity = 72/102 (70.59%), Postives = 86/102 (84.31%), Query Frame = 0 
Query:   15 EGIFRSLLGGVTEIIATTDGLAKTQDALLATSQALLEELRLHDTAHQADVINGRVEKIRETSAALSRIAGRLAALRRRADILEADLEADGCVAGNNMGELRL 116
            +GIFRSL+GGVT++IATTD LA+TQD LLATS+ LLEELRLHDTA QAD I  R +KIR+T AAL R+  RLAALRRRA +LEA+LEADGCVAG+ + +L L
Sbjct:   10 QGIFRSLIGGVTDMIATTDSLAQTQDDLLATSRGLLEELRLHDTARQADAIETRADKIRQTCAALERVTDRLAALRRRAQVLEAELEADGCVAGDGVSDLCL 111
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1110.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FMC6_ECTSI3.900e-4771.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J974_9PHAE1.620e-4070.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 79..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1110contigA-nodosum_M_contig1110:70053..73572 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1110.6.1mRNA_A-nodosum_M_contig1110.6.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1110 69791..73800 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1110.6.1 ID=prot_A-nodosum_M_contig1110.6.1|Name=mRNA_A-nodosum_M_contig1110.6.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=117bp
MSSRPLQDAQDFLAEGIFRSLLGGVTEIIATTDGLAKTQDALLATSQALL
EELRLHDTAHQADVINGRVEKIRETSAALSRIAGRLAALRRRADILEADL
EADGCVAGNNMGELRL*
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