prot_A-nodosum_M_contig1073.18.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1073.18.2
Unique Nameprot_A-nodosum_M_contig1073.18.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length185
Homology
BLAST of mRNA_A-nodosum_M_contig1073.18.2 vs. uniprot
Match: D7FPB2_ECTSI (Proteasome subunit alpha type n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPB2_ECTSI)

HSP 1 Score: 348 bits (893), Expect = 4.160e-120
Identity = 176/183 (96.17%), Postives = 179/183 (97.81%), Query Frame = 0
Query:    1 MSRDSNYDHQITIFSPQGRLYQIEYAFKAAMGSGLTSVSVRGKDTSVMVTQKKVPDRLIDPTSVTNIFKITEKIGCLMTGMIADSRVLVQRLRYEAHEFRFKNGYDCPAHVLARRIADIAQVYTQQASMRALACVAMLIAVDDEKGPQLFK--VDPAGHYFPYKATSSGSKEQEAMNWLEKKV 181
            MSRDSNYDHQIT+FSPQGRLYQIEYAFKAAMG GLTSVSVRGK+TSVMVTQKKVPDRLIDPTSVTNIFKIT+KIGCLMTGMIADSRVLVQRLRYEAHEFRFK GYDCPAHVLARRIADIAQVYTQQASMRALACVAMLIAVDDEKGPQLFK  VDPAGHYFPYKATSSGSKEQEAMNWLEKKV
Sbjct:    1 MSRDSNYDHQITVFSPQGRLYQIEYAFKAAMGPGLTSVSVRGKETSVMVTQKKVPDRLIDPTSVTNIFKITDKIGCLMTGMIADSRVLVQRLRYEAHEFRFKYGYDCPAHVLARRIADIAQVYTQQASMRALACVAMLIAVDDEKGPQLFKGVVDPAGHYFPYKATSSGSKEQEAMNWLEKKV 183          
BLAST of mRNA_A-nodosum_M_contig1073.18.2 vs. uniprot
Match: A0A835YUN1_9STRA (Proteasome subunit alpha type n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUN1_9STRA)

HSP 1 Score: 305 bits (782), Expect = 3.210e-103
Identity = 147/184 (79.89%), Postives = 164/184 (89.13%), Query Frame = 0
Query:    1 MSRDSNYDHQITIFSPQGRLYQIEYAFKAAMGSGLTSVSVRGKDTSVMVTQKKVPDRLIDPTSVTNIFKITEKIGCLMTGMIADSRVLVQRLRYEAHEFRFKNGYDCPAHVLARRIADIAQVYTQQASMRALACVAMLIAVDDEKGPQLFKVDPAGHYFPYKATSSGSKEQEAMNWLEKKVTLL 184
            MSRDSNYDH ITIFSPQGRLYQIEYAFKAA  SGLTSV+VRGKD  V+VTQKKVPDRLIDP SVTN+F++T+++GCLMTGM AD+R  VQRLRYEAHEFRFK GYD P   LARR ADI QVYTQQAS+RALACVA+L+AVDDEKGPQ+FKVDPAGH+FPYKA +SG+KEQEA+NW EKKV  L
Sbjct:    1 MSRDSNYDHHITIFSPQGRLYQIEYAFKAASSSGLTSVAVRGKDACVVVTQKKVPDRLIDPASVTNLFRVTDRVGCLMTGMTADARASVQRLRYEAHEFRFKYGYDVPVGTLARRFADICQVYTQQASLRALACVALLVAVDDEKGPQVFKVDPAGHFFPYKAAASGAKEQEAVNWFEKKVDTL 184          
BLAST of mRNA_A-nodosum_M_contig1073.18.2 vs. uniprot
Match: A0A7S2XVL7_9STRA (Proteasome subunit alpha type n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVL7_9STRA)

HSP 1 Score: 275 bits (702), Expect = 5.090e-91
Identity = 130/180 (72.22%), Postives = 156/180 (86.67%), Query Frame = 0
Query:    2 SRDSNYDHQITIFSPQGRLYQIEYAFKAAMGSGLTSVSVRGKDTSVMVTQKKVPDRLIDPTSVTNIFKITEKIGCLMTGMIADSRVLVQRLRYEAHEFRFKNGYDCPAHVLARRIADIAQVYTQQASMRALACVAMLIAVDDEKGPQLFKVDPAGHYFPYKATSSGSKEQEAMNWLEKKV 181
            +RDSNYD  I+IFSPQGRLYQIEYA KAA  SGLTS++VRG +T  +VTQKKVPDRLIDP SVT+++++  KIGCLMTGM AD+RV+VQRLRYEA E+RFK+GYD P HVLARR+AD++QVYTQ A +RA+A   +L  VDDEKGP LF++DPAGHY P+KATS+G+KEQEAMNWLEKKV
Sbjct:    3 ARDSNYDRYISIFSPQGRLYQIEYAKKAANSSGLTSIAVRGAETCALVTQKKVPDRLIDPESVTSLYQVNNKIGCLMTGMTADARVVVQRLRYEAAEYRFKHGYDVPVHVLARRLADLSQVYTQHAGIRAMAATTILAGVDDEKGPMLFRIDPAGHYLPFKATSAGAKEQEAMNWLEKKV 182          
BLAST of mRNA_A-nodosum_M_contig1073.18.2 vs. uniprot
Match: A0A7S2WQZ1_9STRA (Proteasome subunit alpha type n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WQZ1_9STRA)

HSP 1 Score: 267 bits (683), Expect = 3.940e-88
Identity = 130/180 (72.22%), Postives = 153/180 (85.00%), Query Frame = 0
Query:    2 SRDSNYDHQITIFSPQGRLYQIEYAFKAAMGSGLTSVSVRGKDTSVMVTQKKVPDRLIDPTSVTNIFKITEKIGCLMTGMIADSRVLVQRLRYEAHEFRFKNGYDCPAHVLARRIADIAQVYTQQASMRALACVAMLIAVDDEKGPQLFKVDPAGHYFPYKATSSGSKEQEAMNWLEKKV 181
            SRDSNYD  ITIFSPQGRLYQ+EYA KAA  +GLT+V+VRG ++  MV QKKVPDRLIDP+SVT +++ITEKIGCLMTG+ AD RV V RLR EAHEF+F  GYD P HVLA+RIADI+QVYTQ+AS+R LAC  +L +VDDEKGPQLFK+D AG +FPYKAT++GSK  EAMNWLEK+V
Sbjct:    3 SRDSNYDRHITIFSPQGRLYQVEYAIKAAENTGLTAVAVRGANSCAMVIQKKVPDRLIDPSSVTYVYQITEKIGCLMTGLTADCRVQVTRLRQEAHEFKFNYGYDMPVHVLAKRIADISQVYTQEASLRMLACNVILSSVDDEKGPQLFKIDSAGSFFPYKATAAGSKAAEAMNWLEKRV 182          
BLAST of mRNA_A-nodosum_M_contig1073.18.2 vs. uniprot
Match: K8YP06_NANGC (Proteasome subunit alpha type n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8YP06_NANGC)

HSP 1 Score: 266 bits (679), Expect = 1.450e-87
Identity = 132/179 (73.74%), Postives = 151/179 (84.36%), Query Frame = 0
Query:    3 RDSNYDHQITIFSPQGRLYQIEYAFKAAMGSGLTSVSVRGKDTSVMVTQKKVPDRLIDPTSVTNIFKITEKIGCLMTGMIADSRVLVQRLRYEAHEFRFKNGYDCPAHVLARRIADIAQVYTQQASMRALACVAMLIAVDDEKGPQLFKVDPAGHYFPYKATSSGSKEQEAMNWLEKKV 181
            RDS YDH ITIFSPQGRLYQIEYAFKAA   GLTSV+VRGK+   +VTQKKVPDRLIDP+SV+NI++IT+K+G +MTGM  DSR  V RLR EAHEFRFK GYD P HVLA+RIADIAQ    QASMRALA V ML+ VDDE+GPQL+KVDPAGH+FP+KAT++G K+ EA NWLEKKV
Sbjct:    4 RDSQYDHHITIFSPQGRLYQIEYAFKAANSEGLTSVAVRGKECVAVVTQKKVPDRLIDPSSVSNIYQITDKVGAVMTGMTTDSRAQVTRLRQEAHEFRFKYGYDIPVHVLAKRIADIAQ----QASMRALATVCMLVGVDDERGPQLYKVDPAGHFFPFKATAAGVKQDEATNWLEKKV 178          
BLAST of mRNA_A-nodosum_M_contig1073.18.2 vs. uniprot
Match: A0A4D9D8R2_9STRA (PROTEASOME_ALPHA_1 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8R2_9STRA)

HSP 1 Score: 279 bits (714), Expect = 2.190e-86
Identity = 136/179 (75.98%), Postives = 155/179 (86.59%), Query Frame = 0
Query:    3 RDSNYDHQITIFSPQGRLYQIEYAFKAAMGSGLTSVSVRGKDTSVMVTQKKVPDRLIDPTSVTNIFKITEKIGCLMTGMIADSRVLVQRLRYEAHEFRFKNGYDCPAHVLARRIADIAQVYTQQASMRALACVAMLIAVDDEKGPQLFKVDPAGHYFPYKATSSGSKEQEAMNWLEKKV 181
            RDS YDH ITIFSPQGRLYQIEYAFKAA   GLTSV+VRGK+   +VTQKKVPDRLIDP+SV+NI++IT+K+G +MTGM  DSR  V RLR EAHEFRFK GYD P HVLA+RIADIAQVYTQQASMRALA V ML+ VDDE+GPQL+KVDPAGH+FP+KAT++G K+ EA NWLEKKV
Sbjct:   29 RDSQYDHHITIFSPQGRLYQIEYAFKAANSEGLTSVAVRGKECVAVVTQKKVPDRLIDPSSVSNIYQITDKLGAVMTGMTTDSRAQVTRLRQEAHEFRFKYGYDIPVHVLAKRIADIAQVYTQQASMRALATVCMLVGVDDERGPQLYKVDPAGHFFPFKATAAGVKQDEATNWLEKKV 207          
BLAST of mRNA_A-nodosum_M_contig1073.18.2 vs. uniprot
Match: A0A7S2VZ72_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2VZ72_9STRA)

HSP 1 Score: 259 bits (663), Expect = 4.620e-85
Identity = 129/182 (70.88%), Postives = 153/182 (84.07%), Query Frame = 0
Query:    1 MSRDSNYDHQITIFSPQGRLYQIEYAFKAAMG-SGLTSVSVRGKDTSVMVTQKKVPDRLIDPTSVTNIFKITEKIGCLMTGMIADSRVLVQRLRYEAHEFRFKNGYDCPAHVLARRIADIAQVYTQQASMRALACVAMLIAVDDEKGPQLFKVDPAGHYFPYKATSSGSKEQEAMNWLEKKV 181
            MSRDSNYDH I+IFSPQGRLYQ+EYAFKAA   SGLT V++RGKDT  +VTQKK+PDRL+DP SVT+IF IT KIGCL+TG++ D +  +QR RYEA +F+F+NGY  P HVLARRIADIAQV TQ ASMR LA V +LI VDDE+GPQ+FKVD AGH+ P+ AT+SGSKEQEA+N+LEK V
Sbjct:    1 MSRDSNYDHHISIFSPQGRLYQMEYAFKAASSASGLTGVAIRGKDTCCVVTQKKIPDRLMDPKSVTHIFNITPKIGCLITGIMPDCKAQIQRARYEAADFQFQNGYSIPVHVLARRIADIAQVNTQSASMRPLATVCLLIGVDDERGPQVFKVDCAGHFLPFLATASGSKEQEAVNFLEKSV 182          
BLAST of mRNA_A-nodosum_M_contig1073.18.2 vs. uniprot
Match: A0A7S2C157_9STRA (Proteasome subunit alpha type n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C157_9STRA)

HSP 1 Score: 259 bits (661), Expect = 1.030e-84
Identity = 124/180 (68.89%), Postives = 149/180 (82.78%), Query Frame = 0
Query:    1 MSRDSNYDHQITIFSPQGRLYQIEYAFKAAMGSGLTSVSVRGKDTSVMVTQKKVPDRLIDPTSVTNIFKITEKIGCLMTGMIADSRVLVQRLRYEAHEFRFKNGYDCPAHVLARRIADIAQVYTQQASMRALACVAMLIAVDDEKGPQLFKVDPAGHYFPYKATSSGSKEQEAMNWLEKK 180
            MSRD+NYD  ITIFSPQGRLYQ+EYA KAA  +GLT+V+VRG D+  +V QKKVPDRLIDPTSVT +++IT KIGCLMTG+ AD RV V R+R EAH+++F  GYD P HVLA+RIADI QVYTQ+AS+R LAC  ++ +VDDE GPQ+FK+D AG YFP+KAT+SGSK  EA NWLEKK
Sbjct:    9 MSRDANYDRHITIFSPQGRLYQVEYALKAADSTGLTAVAVRGADSCALVIQKKVPDRLIDPTSVTYVYEITPKIGCLMTGLTADCRVQVTRMRQEAHQYKFDYGYDMPVHVLAKRIADICQVYTQEASLRMLACNVIIASVDDELGPQIFKIDAAGSYFPFKATASGSKHMEATNWLEKK 188          
BLAST of mRNA_A-nodosum_M_contig1073.18.2 vs. uniprot
Match: F0W2W5_9STRA (Proteasome subunit alpha type n=2 Tax=Albugo TaxID=65356 RepID=F0W2W5_9STRA)

HSP 1 Score: 256 bits (654), Expect = 9.130e-84
Identity = 125/175 (71.43%), Postives = 147/175 (84.00%), Query Frame = 0
Query:    7 YDHQITIFSPQGRLYQIEYAFKAAMGSGLTSVSVRGKDTSVMVTQKKVPDRLIDPTSVTNIFKITEKIGCLMTGMIADSRVLVQRLRYEAHEFRFKNGYDCPAHVLARRIADIAQVYTQQASMRALACVAMLIAVDDEKGPQLFKVDPAGHYFPYKATSSGSKEQEAMNWLEKKV 181
            YD  ITIFSP+GRLYQIEYAFKA  GSGLTSV+VRG D+ V +TQKKV D+LIDP SVT+IF+IT +IGCLMTGM AD++  VQRLRYEA+EF FK GY  P +VLA+R ADIAQVYTQ ASMRA   V MLI +DDEKGPQL+K+DPAGH++ YKATS+G  EQ+A+N+LEKKV
Sbjct:    6 YDRHITIFSPEGRLYQIEYAFKAVQGSGLTSVAVRGMDSCVFITQKKVQDKLIDPESVTHIFQITAEIGCLMTGMYADAKAQVQRLRYEANEFAFKFGYSVPCYVLAKRAADIAQVYTQHASMRAFGVVTMLIGIDDEKGPQLYKIDPAGHFWGYKATSAGKNEQQALNYLEKKV 180          
BLAST of mRNA_A-nodosum_M_contig1073.18.2 vs. uniprot
Match: H3G9M2_PHYRM (Proteasome subunit alpha type n=26 Tax=Oomycota TaxID=4762 RepID=H3G9M2_PHYRM)

HSP 1 Score: 256 bits (653), Expect = 1.300e-83
Identity = 124/175 (70.86%), Postives = 149/175 (85.14%), Query Frame = 0
Query:    7 YDHQITIFSPQGRLYQIEYAFKAAMGSGLTSVSVRGKDTSVMVTQKKVPDRLIDPTSVTNIFKITEKIGCLMTGMIADSRVLVQRLRYEAHEFRFKNGYDCPAHVLARRIADIAQVYTQQASMRALACVAMLIAVDDEKGPQLFKVDPAGHYFPYKATSSGSKEQEAMNWLEKKV 181
            YD  ITIFSP+GRLYQIEYAF+AA  S LTSV+VRGKD++V VTQKKV D+LI+P SVTN+F+IT +IGCLMTG+ ADS+  VQRLR+EAHEF  K GY  P HVLA+RIAD+AQVYTQ ASMRA   + ML++VD+EKGPQLFK+DPAGH++ YKATS+G KEQEA N+LEKK+
Sbjct:    6 YDRHITIFSPEGRLYQIEYAFRAAKESTLTSVAVRGKDSAVFVTQKKVQDKLIEPDSVTNVFQITPEIGCLMTGLYADSKAQVQRLRFEAHEFENKFGYKIPCHVLAKRIADVAQVYTQHASMRAFGVITMLVSVDEEKGPQLFKIDPAGHFWGYKATSAGVKEQEAQNYLEKKI 180          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1073.18.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPB2_ECTSI4.160e-12096.17Proteasome subunit alpha type n=1 Tax=Ectocarpus s... [more]
A0A835YUN1_9STRA3.210e-10379.89Proteasome subunit alpha type n=1 Tax=Tribonema mi... [more]
A0A7S2XVL7_9STRA5.090e-9172.22Proteasome subunit alpha type n=1 Tax=Fibrocapsa j... [more]
A0A7S2WQZ1_9STRA3.940e-8872.22Proteasome subunit alpha type n=2 Tax=Rhizochromul... [more]
K8YP06_NANGC1.450e-8773.74Proteasome subunit alpha type n=2 Tax=Nannochlorop... [more]
A0A4D9D8R2_9STRA2.190e-8675.98PROTEASOME_ALPHA_1 domain-containing protein n=1 T... [more]
A0A7S2VZ72_9STRA4.620e-8570.88Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S2C157_9STRA1.030e-8468.89Proteasome subunit alpha type n=1 Tax=Dictyocha sp... [more]
F0W2W5_9STRA9.130e-8471.43Proteasome subunit alpha type n=2 Tax=Albugo TaxID... [more]
H3G9M2_PHYRM1.300e-8370.86Proteasome subunit alpha type n=26 Tax=Oomycota Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000426Proteasome alpha-subunit, N-terminal domainSMARTSM00948Proteasome_A_N_2coord: 7..29
e-value: 2.8E-10
score: 50.1
IPR000426Proteasome alpha-subunit, N-terminal domainPFAMPF10584Proteasome_A_Ncoord: 7..29
e-value: 3.3E-13
score: 49.0
IPR000426Proteasome alpha-subunit, N-terminal domainPROSITEPS00388PROTEASOME_ALPHA_1coord: 7..29
IPR001353Proteasome, subunit alpha/betaPFAMPF00227Proteasomecoord: 33..181
e-value: 4.6E-43
score: 147.0
IPR029055Nucleophile aminohydrolases, N-terminalGENE3D3.60.20.10Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1coord: 2..183
e-value: 7.5E-72
score: 243.5
IPR029055Nucleophile aminohydrolases, N-terminalSUPERFAMILY56235N-terminal nucleophile aminohydrolases (Ntn hydrolases)coord: 5..181
NoneNo IPR availablePANTHERPTHR11599PROTEASOME SUBUNIT ALPHA/BETAcoord: 1..182
NoneNo IPR availablePANTHERPTHR11599:SF11PROTEASOME SUBUNIT ALPHA TYPE-6coord: 1..182
IPR023332Proteasome alpha-type subunitPROSITEPS51475PROTEASOME_ALPHA_2coord: 22..184
score: 48.518383
IPR034642Proteasome subunit alpha6CDDcd03754proteasome_alpha_type_6coord: 7..181
e-value: 2.60967E-113
score: 319.18

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1073contigA-nodosum_M_contig1073:175753..185396 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1073.18.2mRNA_A-nodosum_M_contig1073.18.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1073 175753..185539 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1073.18.2 ID=prot_A-nodosum_M_contig1073.18.2|Name=mRNA_A-nodosum_M_contig1073.18.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=185bp
MSRDSNYDHQITIFSPQGRLYQIEYAFKAAMGSGLTSVSVRGKDTSVMVT
QKKVPDRLIDPTSVTNIFKITEKIGCLMTGMIADSRVLVQRLRYEAHEFR
FKNGYDCPAHVLARRIADIAQVYTQQASMRALACVAMLIAVDDEKGPQLF
KVDPAGHYFPYKATSSGSKEQEAMNWLEKKVTLL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000426Proteasome_asu_N
IPR001353Proteasome_sua/b
IPR029055Ntn_hydrolases_N
IPR023332Proteasome_alpha-type
IPR034642Proteasome_subunit_alpha6