prot_A-nodosum_M_contig997.24.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig997.24.2
Unique Nameprot_A-nodosum_M_contig997.24.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length256
Homology
BLAST of mRNA_A-nodosum_M_contig997.24.2 vs. uniprot
Match: A0A6H5K9J2_9PHAE (Ubiquitinyl hydrolase 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9J2_9PHAE)

HSP 1 Score: 285 bits (728), Expect = 5.650e-94
Identity = 152/260 (58.46%), Postives = 174/260 (66.92%), Query Frame = 0
Query:    4 MYHEKQYLMHCAVHTLNNLFQEQWATASLLEDIAKELFDRDVSMRKEAGMGGMWINPYKCVVPRVGYYDITVLLEALKLKDCHVSVHAVFNPKDPAAVARSTKDLDPR-SGVRGVVVNRVTLSVLGGLVTGSHYYAIVPWVRGTRPAIHHSAESEPLLSTPVVNDTKPSATPEAGSSEHAVRFTDGDDIVWYVVDSKAPEPELIGGVAELALHLGMEAREHQAHVFVISDGKCPE-------EGGDAGASSGECEKNASG 255
            M+HEKQYLMHCAVHTLNNLFQE WATASL+EDIAKELF+R+ +MRKE+GMG MW+NPYK VVP+VGYYDI  LLEAL LK CHVS+HAVFNPK+P AVA+S + LDP   GVRG+VVNRV+ S+LGGL T  H+YAI+P+                                  G    A     G+ + WYVVDSKA  PE+IG  AELALHLGMEAREHQ HVFVISDGKC          GG     SG+ EK A G
Sbjct:    6 MFHEKQYLMHCAVHTLNNLFQESWATASLMEDIAKELFNREATMRKESGMGRMWVNPYKSVVPQVGYYDINCLLEALNLKKCHVSLHAVFNPKEPNAVAKSLEHLDPSLGGVRGIVVNRVSKSLLGGLYTTHHFYAIIPY---------------------------------KGEWACADNSIGGEGMAWYVVDSKADAPEIIGSAAELALHLGMEAREHQGHVFVISDGKCEVMTGAGNGAGGXXXGDSGKQEKTAGG 232          
BLAST of mRNA_A-nodosum_M_contig997.24.2 vs. uniprot
Match: D8LDY3_ECTSI (Ubiquitinyl hydrolase 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDY3_ECTSI)

HSP 1 Score: 195 bits (495), Expect = 1.630e-59
Identity = 103/190 (54.21%), Postives = 122/190 (64.21%), Query Frame = 0
Query:   53 MGGMWINPYKCVVPRVGYYDITVLLEALKLKDCHVSVHAVFNPKDPAAVARSTKDLDPR-SGVRGVVVNRVTLSVLGGLVTGSHYYAIVPWVRGTRPAIHHSAESEPLLSTPVVNDTKPSATPEAGSSEHAVRFTDGDDIVWYVVDSKAPEPELIGGVAELALHLGMEAREHQAHVFVISDGKCPEEGGD 241
            MG MW+NPYK VVP+VGYYDI  LLEALKLK CH+S+HAVFNPK+P AVA+S + LDP   GVRG+VVNRV+ S+LGGL T  H+YAI+P+ +G R                                        G+ + WYVVDSKA  PE+IG  AELALHLGMEAREHQ HVFV+SDG+C    GD
Sbjct:    1 MGRMWVNPYKSVVPQVGYYDINCLLEALKLKKCHISLHAVFNPKEPNAVAKSLEHLDPSLGGVRGIVVNRVSKSLLGGLYTTHHFYAIIPY-KGIR----------------------------------------GNGMAWYVVDSKADAPEIIGSAAELALHLGMEAREHQGHVFVVSDGECEVMAGD 149          
BLAST of mRNA_A-nodosum_M_contig997.24.2 vs. uniprot
Match: D7FI75_ECTSI (Ubiquitinyl hydrolase 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI75_ECTSI)

HSP 1 Score: 145 bits (366), Expect = 1.920e-38
Identity = 74/138 (53.62%), Postives = 96/138 (69.57%), Query Frame = 0
Query:    4 MYHEKQYLMHCAVHTLNNLFQEQWATASLLEDIAKELFDRDVSMRKEAGMGGMWINPYKCVVPRVGYYDITVLLEALKLKDCHVSVHAVFNPKDPAAVARSTKDLDPRSG-VRGVVVNRVTLSVLGGLVTGSHYYAIV 140
            MYHE+Q LM CA+H LNNLFQE WA   L+E +A EL +R+ ++R E+G+  + INPYK V+P VG YDI V+LEALKL++C VS+H VFN KDP A   +   +D  S  +RGV+VN V  S+L G     H+YAIV
Sbjct:    1 MYHERQRLMQCAMHALNNLFQEPWANRELMERLALELGNREATLRSESGLRRLLINPYKSVIPMVGDYDINVVLEALKLRECRVSLHVVFNAKDPTAFELALARVDWDSATIRGVIVNFVCRSLLWGSWVTHHFYAIV 138          
BLAST of mRNA_A-nodosum_M_contig997.24.2 vs. uniprot
Match: W7TJE7_9STRA (Ubiquitinyl hydrolase 1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJE7_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 1.080e-14
Identity = 76/276 (27.54%), Postives = 116/276 (42.03%), Query Frame = 0
Query:    5 YHEKQYLMHCAVHTLNNLFQEQWATASLLEDIAKELFDRD-VSMRKEAGMGGMWINP-------------YKCVVPRVGYYDITVLLEALKLKDCHVSVHAVFNPK--DPAAVAR------------STKDLDPRSGVRGVVVNRVTLS-VLGGLVTGSHYYAIVPWVRGTRPAIHHSAESEPLLSTPVVNDTKPSATPEAGSSEHAVRFTDGDDIVWYVVDSKAPEPELIGGVAELALHLGMEA---REHQAHVFVISDGKCPEEGGDAGASSGE 248
            YHE Q  + C  HTLNNL+Q  W   + ++ +A  L   D  S  +  G G  W+               Y+  VP +G YD++VL+EALK+++    +H + N +  +  AV              +T+D        GV++NR + +     L+ G H+ A++PW                           PS +  +G          G+ I W+++DSK P P L+GG AE A+    EA    E QA + V + G      G  G   GE
Sbjct:   22 YHETQRRLCCGTHTLNNLYQHHWIDTATMDHLASSLGAADKASSGQHKGSG--WLESALRRASDPFAPTAYRSWVPGLGGYDVSVLVEALKMRNARFDMHVLKNGRLEEDLAVLHVRLSGVAGRGPGATEDEGRGERAIGVILNRKSRTWAARWLLEGRHWLALIPW---------------------------PSGSAASG----------GEQIRWWMMDSKLPAPVLVGG-AEHAVASVREAVCGEEGQAFLVVEAVGAGERGSGGRGVGGGE 257          
BLAST of mRNA_A-nodosum_M_contig997.24.2 vs. uniprot
Match: A0A836CAV1_9STRA (Ubiquitinyl hydrolase 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAV1_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 2.870e-11
Identity = 30/80 (37.50%), Postives = 52/80 (65.00%), Query Frame = 0
Query:   41 FDRDVSMRKEAGMGGMWINPYKCVVPRVGYYDITVLLEALKLKDCHVSVHAVFNPKDPAAVARSTKDLDPRSGVRGVVVN 120
            F ++ ++RK +G+  +W+NP+K  VP +GYYD++VL+EAL+ +   VS H  +NP  P   A+   ++D    V G+++N
Sbjct:   12 FAKESALRKASGLSTLWVNPFKSAVPFLGYYDLSVLVEALQTRGVRVSAHVAWNPAHPDLCAQELTEVDLEHCV-GLIIN 90          
BLAST of mRNA_A-nodosum_M_contig997.24.2 vs. uniprot
Match: A0A8J5EFJ7_9DIPT (Ubiquitinyl hydrolase 1 n=2 Tax=Bradysia TaxID=35571 RepID=A0A8J5EFJ7_9DIPT)

HSP 1 Score: 62.0 bits (149), Expect = 3.660e-8
Identity = 37/86 (43.02%), Postives = 51/86 (59.30%), Query Frame = 0
Query:    1 MASMYHEKQYLMHCAVHTLNNLFQEQWA-TASLLEDIAKELFDRDVSMRKEAGMGGMWINPYKCVVPRVGYYDITVLLEALKLKDC 85
            MA  YHEKQ L  CA+H LNNLFQE+ + + S L++I K L D              WINP++ ++  +G YDI V++ AL+ K C
Sbjct:    1 MARPYHEKQVLSLCALHALNNLFQERGSYSKSELDEICKHLSDE-------------WINPHRSMLG-LGNYDINVIMSALQKKGC 72          
BLAST of mRNA_A-nodosum_M_contig997.24.2 vs. uniprot
Match: UPI000A29B53D (josephin-like protein n=1 Tax=Arabidopsis lyrata subsp. lyrata TaxID=81972 RepID=UPI000A29B53D)

HSP 1 Score: 60.5 bits (145), Expect = 6.490e-8
Identity = 48/140 (34.29%), Postives = 74/140 (52.86%), Query Frame = 0
Query:    1 MASMYHEKQYLMHCAVHTLNNLFQEQWA-TASLLEDIAKELFDRDVSMRKEAGMGGMWINPYKCVVPRVGYYDITVLLEALKLKDCHVSVHAVFNPKDPAAVARSTKDLDPRSGVRGVVVNRVTLSVLGGLVTGSHYYAI 139
            MA +YHE+Q L  C +H+LNNLFQE+ A T   L  IA++L D D +      +  + + P+   +   G YD+ V+++AL+ K   V    V++ K   A   S  DLD    + G+V+N V +   GGL    H+  +
Sbjct:    1 MAKIYHERQRLQFCLLHSLNNLFQEKDAFTKESLNSIAEKLVDDDPNKETWTPLSFL-LKPHHNTL--TGNYDVNVMIKALEGKGKSV----VWHDKRCGA---SLIDLDDADTLMGIVLN-VPVKRYGGLWRSRHWVVV 129          
BLAST of mRNA_A-nodosum_M_contig997.24.2 vs. uniprot
Match: UPI001FB05C1C (josephin-like protein n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB05C1C)

HSP 1 Score: 61.2 bits (147), Expect = 7.390e-8
Identity = 49/142 (34.51%), Postives = 68/142 (47.89%), Query Frame = 0
Query:    4 MYHEKQYLMHCAVHTLNNLFQEQWA-TASLLEDIAKELFDRDVSMRKEAGMGGMWINPYKCVV-----PRVGYYDITVLLEALKLKDCHVSVHAVFNPKDPAAVARSTKDLDPRSGVRGVVVNRVTLSVLGGLVTGSHYYAI 139
            +YHE+Q L  C +H+LNNLFQ++ A T   L  IA+ L   D +      + G W  P   ++     P  G YDI VL+ AL+     V  H      D    A S    DP   + G+VVN + +   GGL    H++AI
Sbjct:    9 IYHERQRLQFCLLHSLNNLFQDKNAFTREELNAIAERLVLNDPNT---FSISGSWKTPLSVILKPHYNPLTGNYDINVLITALEGMGKSVVWH------DRRNKAASIDLDDPEGRLMGIVVN-IAVRKFGGLWKSRHWFAI 140          
BLAST of mRNA_A-nodosum_M_contig997.24.2 vs. uniprot
Match: A0A813SSD2_9BILA (Ubiquitinyl hydrolase 1 n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A813SSD2_9BILA)

HSP 1 Score: 60.5 bits (145), Expect = 1.650e-7
Identity = 55/228 (24.12%), Postives = 100/228 (43.86%), Query Frame = 0
Query:    3 SMYHEKQYLMHCAVHTLNNLFQEQWATASLLEDIAKELFDRDVSMRKEAGMGGMWINPYKCVVPRVGYYDITVLLEALKLKDCHVSVHAVFNPKDPAAVARSTKDLDPRSGVRGVVVNRVTLSVLGGLVTGSHYYAIVPWVRGTRPAIHHSAESEPLLSTPVVNDTKPSATPEAGSSEHAVRFTDGDDIVWYVVDSKAPEPELIGGVAELALHLGMEAREHQAHVFVI 230
            ++YHEKQ    CA+HTLNNLFQ+ + T   L+ I  EL  ++            W+NP++ +  R G Y+I ++++AL+L+D H ++   F+ +    +          + ++G ++N  +   + G++        +PW R                                   +H V  +   D V+Y +DSK  EPE+IG   +L  +L    +     +F++
Sbjct:   21 NIYHEKQKKELCALHTLNNLFQDNFYTKQKLDQICIELCPQE------------WLNPHRGLFGR-GNYNINIIMKALQLRD-HEAIW--FDKRRSVTILNF-------ANIKGFILNIPSDYKIAGILP-------LPWER-----------------------------------KHWVAISRIGD-VYYNLDSKLDEPEIIGDELKLTAYLDNLIKCKDKELFLV 182          
BLAST of mRNA_A-nodosum_M_contig997.24.2 vs. uniprot
Match: A0A0P9AHL4_DROAN (Ubiquitinyl hydrolase 1 n=1 Tax=Drosophila ananassae TaxID=7217 RepID=A0A0P9AHL4_DROAN)

HSP 1 Score: 59.7 bits (143), Expect = 2.200e-7
Identity = 45/128 (35.16%), Postives = 71/128 (55.47%), Query Frame = 0
Query:    4 MYHEKQYLMHCAVHTLNNLFQ-EQWATASLLEDIAKELFDRDVSMRKEAGMGGMWINPYKCVVPRVGYYDITVLLEALKLKDCHVSVHAVFNPKDPAAVARSTKDLDPRSGVRGVVVNRVTLSVLGGL 130
            +YHEKQ +  CA+HTLNNLFQ  +  + S L++I   L          + +G  WINP++ ++  +G YD+ V++ ALKLK+C V      N  DP+ +     +LD   G+ G ++N  +   +G L
Sbjct:    6 IYHEKQVMQLCALHTLNNLFQGNKLYSKSDLDNICNNL----------SPIG--WINPHRSIIG-LGNYDVNVIIAALKLKNCDVVWFDKRN--DPSCI-----NLD---GIVGFILNIPSDCKIGNL 110          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig997.24.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9J2_9PHAE5.650e-9458.46Ubiquitinyl hydrolase 1 n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDY3_ECTSI1.630e-5954.21Ubiquitinyl hydrolase 1 n=1 Tax=Ectocarpus silicul... [more]
D7FI75_ECTSI1.920e-3853.62Ubiquitinyl hydrolase 1 n=2 Tax=Ectocarpus TaxID=2... [more]
W7TJE7_9STRA1.080e-1427.54Ubiquitinyl hydrolase 1 n=2 Tax=Monodopsidaceae Ta... [more]
A0A836CAV1_9STRA2.870e-1137.50Ubiquitinyl hydrolase 1 n=1 Tax=Tribonema minus Ta... [more]
A0A8J5EFJ7_9DIPT3.660e-843.02Ubiquitinyl hydrolase 1 n=2 Tax=Bradysia TaxID=355... [more]
UPI000A29B53D6.490e-834.29josephin-like protein n=1 Tax=Arabidopsis lyrata s... [more]
UPI001FB05C1C7.390e-834.51josephin-like protein n=1 Tax=Impatiens glandulife... [more]
A0A813SSD2_9BILA1.650e-724.12Ubiquitinyl hydrolase 1 n=1 Tax=Brachionus calycif... [more]
A0A0P9AHL4_DROAN2.200e-735.16Ubiquitinyl hydrolase 1 n=1 Tax=Drosophila ananass... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006155Josephin domainSMARTSM01246Josephin_2coord: 8..233
e-value: 3.0E-7
score: 38.2
IPR006155Josephin domainPFAMPF02099Josephincoord: 11..230
e-value: 9.1E-15
score: 55.1
IPR006155Josephin domainPROSITEPS50957JOSEPHINcoord: 1..245
score: 13.487017
NoneNo IPR availableGENE3D3.90.70.40coord: 14..87
e-value: 2.2E-7
score: 32.6
NoneNo IPR availableGENE3D1.10.287.10coord: 27..68
e-value: 2.2E-7
score: 32.6
NoneNo IPR availablePANTHERPTHR13291:SF0JOSEPHIN-LIKE PROTEINcoord: 3..230
IPR040053Josephin-1/2PANTHERPTHR13291JOSEPHIN 1, 2coord: 3..230

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig997contigA-nodosum_M_contig997:175978..178334 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig997.24.2mRNA_A-nodosum_M_contig997.24.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig997 175478..179692 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig997.24.2 ID=prot_A-nodosum_M_contig997.24.2|Name=mRNA_A-nodosum_M_contig997.24.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=256bp
MASMYHEKQYLMHCAVHTLNNLFQEQWATASLLEDIAKELFDRDVSMRKE
AGMGGMWINPYKCVVPRVGYYDITVLLEALKLKDCHVSVHAVFNPKDPAA
VARSTKDLDPRSGVRGVVVNRVTLSVLGGLVTGSHYYAIVPWVRGTRPAI
HHSAESEPLLSTPVVNDTKPSATPEAGSSEHAVRFTDGDDIVWYVVDSKA
PEPELIGGVAELALHLGMEAREHQAHVFVISDGKCPEEGGDAGASSGECE
KNASG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006155Josephin
IPR040053JOSD1/2