mRNA_A-nodosum_M_contig997.24.2 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig997.24.2 vs. uniprot
Match: A0A6H5K9J2_9PHAE (Ubiquitinyl hydrolase 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9J2_9PHAE) HSP 1 Score: 288 bits (736), Expect = 9.420e-88 Identity = 152/260 (58.46%), Postives = 174/260 (66.92%), Query Frame = 3
Query: 510 MYHEKQYLMHCAVHTLNNLFQEQWATASLLEDIAKELFDRDVSMRKEAGMGGMWINPYKCVVPRVGYYDITVLLEALKLKDCHVSVHAVFNPKDPAAVARSTKDLDPR-SGVRGVVVNRVTLSVLGGLVTGSHYYAIVPWVRGTRPAIHHSAESEPLLSTPVVNDTKPSATPEAGSSEHAVRFTDGDDIVWYVVDSKAPEPELIGGVAELALHLGMEAREHQAHVFVISDGKCPE-------EGGDAGASSGECEKNASG 1265
M+HEKQYLMHCAVHTLNNLFQE WATASL+EDIAKELF+R+ +MRKE+GMG MW+NPYK VVP+VGYYDI LLEAL LK CHVS+HAVFNPK+P AVA+S + LDP GVRG+VVNRV+ S+LGGL T H+YAI+P+ G A G+ + WYVVDSKA PE+IG AELALHLGMEAREHQ HVFVISDGKC GG SG+ EK A G
Sbjct: 6 MFHEKQYLMHCAVHTLNNLFQESWATASLMEDIAKELFNREATMRKESGMGRMWVNPYKSVVPQVGYYDINCLLEALNLKKCHVSLHAVFNPKEPNAVAKSLEHLDPSLGGVRGIVVNRVSKSLLGGLYTTHHFYAIIPY---------------------------------KGEWACADNSIGGEGMAWYVVDSKADAPEIIGSAAELALHLGMEAREHQGHVFVISDGKCEVMTGAGNGAGGXXXGDSGKQEKTAGG 232
BLAST of mRNA_A-nodosum_M_contig997.24.2 vs. uniprot
Match: D8LDY3_ECTSI (Ubiquitinyl hydrolase 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDY3_ECTSI) HSP 1 Score: 196 bits (498), Expect = 1.450e-54 Identity = 103/190 (54.21%), Postives = 122/190 (64.21%), Query Frame = 3
Query: 657 MGGMWINPYKCVVPRVGYYDITVLLEALKLKDCHVSVHAVFNPKDPAAVARSTKDLDPR-SGVRGVVVNRVTLSVLGGLVTGSHYYAIVPWVRGTRPAIHHSAESEPLLSTPVVNDTKPSATPEAGSSEHAVRFTDGDDIVWYVVDSKAPEPELIGGVAELALHLGMEAREHQAHVFVISDGKCPEEGGD 1223
MG MW+NPYK VVP+VGYYDI LLEALKLK CH+S+HAVFNPK+P AVA+S + LDP GVRG+VVNRV+ S+LGGL T H+YAI+P+ +G R G+ + WYVVDSKA PE+IG AELALHLGMEAREHQ HVFV+SDG+C GD
Sbjct: 1 MGRMWVNPYKSVVPQVGYYDINCLLEALKLKKCHISLHAVFNPKEPNAVAKSLEHLDPSLGGVRGIVVNRVSKSLLGGLYTTHHFYAIIPY-KGIR----------------------------------------GNGMAWYVVDSKADAPEIIGSAAELALHLGMEAREHQGHVFVVSDGECEVMAGD 149
BLAST of mRNA_A-nodosum_M_contig997.24.2 vs. uniprot
Match: D7FI75_ECTSI (Ubiquitinyl hydrolase 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI75_ECTSI) HSP 1 Score: 158 bits (400), Expect = 2.210e-39 Identity = 99/286 (34.62%), Postives = 135/286 (47.20%), Query Frame = 3
Query: 510 MYHEKQYLMHCAVHTLNNLFQEQWATASLLEDIAKELFDRDVSMRKEAGMGGMWINPYKCVVPRVGYYDITVLLEALKLKDCHVSVHAVFNPKDPAAVARSTKDLDPRSG-VRGVVVNRVTLSVLGGLVTGSHYYAIVPWVR------GTRPA---------------------------------------IHHSAESEPLLSTPVVNDTKPSATPEAGSSEHAVRFTDGD----------DIVWYVVDSKAPEPELIGGVAELALHLGMEAREHQAHVFVISDG 1199
MYHE+Q LM CA+H LNNLFQE WA L+E +A EL +R+ ++R E+G+ + INPYK V+P VG YDI V+LEALKL++C VS+H VFN KDP A + +D S +RGV+VN V S+L G H+YAIV G P + E ++ ++ G + + G WY +DS+ P+P+ +GG L HL E REH HVFV+ +G
Sbjct: 1 MYHERQRLMQCAMHALNNLFQEPWANRELMERLALELGNREATLRSESGLRRLLINPYKSVIPMVGDYDINVVLEALKLRECRVSLHVVFNAKDPTAFELALARVDWDSATIRGVIVNFVCRSLLWGSWVTHHFYAIVKAKGPGDGDDGLSPGGXXXXXXXXXXXXXXXTRHLERVGXXXXXXXXXXXXXXXXXXGDDGEQTGCFEKLSPSRRRGKDNRGRTRNRTSSNQGSCCGSDGGGAGGTAWYSLDSRIPKPQRLGGTRGLVEHLAWEVREHHGHVFVVGEG 286
BLAST of mRNA_A-nodosum_M_contig997.24.2 vs. uniprot
Match: W7TJE7_9STRA (Ubiquitinyl hydrolase 1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJE7_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 4.340e-14 Identity = 76/276 (27.54%), Postives = 116/276 (42.03%), Query Frame = 3
Query: 513 YHEKQYLMHCAVHTLNNLFQEQWATASLLEDIAKELFDRD-VSMRKEAGMGGMWINP-------------YKCVVPRVGYYDITVLLEALKLKDCHVSVHAVFNPK--DPAAVAR------------STKDLDPRSGVRGVVVNRVTLS-VLGGLVTGSHYYAIVPWVRGTRPAIHHSAESEPLLSTPVVNDTKPSATPEAGSSEHAVRFTDGDDIVWYVVDSKAPEPELIGGVAELALHLGMEA---REHQAHVFVISDGKCPEEGGDAGASSGE 1244
YHE Q + C HTLNNL+Q W + ++ +A L D S + G G W+ Y+ VP +G YD++VL+EALK+++ +H + N + + AV +T+D GV++NR + + L+ G H+ A++PW PS + +G G+ I W+++DSK P P L+GG AE A+ EA E QA + V + G G G GE
Sbjct: 22 YHETQRRLCCGTHTLNNLYQHHWIDTATMDHLASSLGAADKASSGQHKGSG--WLESALRRASDPFAPTAYRSWVPGLGGYDVSVLVEALKMRNARFDMHVLKNGRLEEDLAVLHVRLSGVAGRGPGATEDEGRGERAIGVILNRKSRTWAARWLLEGRHWLALIPW---------------------------PSGSAASG----------GEQIRWWMMDSKLPAPVLVGG-AEHAVASVREAVCGEEGQAFLVVEAVGAGERGSGGRGVGGGE 257
BLAST of mRNA_A-nodosum_M_contig997.24.2 vs. uniprot
Match: A0A836CAV1_9STRA (Ubiquitinyl hydrolase 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAV1_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 6.270e-11 Identity = 54/200 (27.00%), Postives = 86/200 (43.00%), Query Frame = 3
Query: 621 FDRDVSMRKEAGMGGMWINPYKCVVPRVGYYDITVLLEALKLKDCHVSVHAVFNPKDPAAVARSTKDLDPRSGVRGVVVNRVTLSVLGGLVTGSHYYAIVPWVRGTRPAIHHSAESEPLLSTPVVNDTKPSATPEAGSSEHAVRFTDGDDIVWYVVDSKAPEPELIGGVAELALHLGMEAREHQAHVFVISDGKCPEEGG 1220
F ++ ++RK +G+ +W+NP+K VP +GYYD++VL+EAL+ + VS H +NP P A+ ++D V G+++N S++ H+ A+ R DG + DSK EP+ +GG A+L L + R F +S G EEGG
Sbjct: 12 FAKESALRKASGLSTLWVNPFKSAVPFLGYYDLSVLVEALQTRGVRVSAHVAWNPAHPDLCAQELTEVDLEHCV-GLIINCRDPSMVW---RPRHWLAVA-------------------------------------------RIADG---TFVNCDSKLLEPQRVGGGAQLLPWLLEDLRSRDGQAFFMS-GAADEEGG 160
BLAST of mRNA_A-nodosum_M_contig997.24.2 vs. uniprot
Match: A0A8J5EFJ7_9DIPT (Ubiquitinyl hydrolase 1 n=2 Tax=Bradysia TaxID=35571 RepID=A0A8J5EFJ7_9DIPT) HSP 1 Score: 63.2 bits (152), Expect = 1.100e-7 Identity = 37/86 (43.02%), Postives = 51/86 (59.30%), Query Frame = 3
Query: 501 MASMYHEKQYLMHCAVHTLNNLFQEQWA-TASLLEDIAKELFDRDVSMRKEAGMGGMWINPYKCVVPRVGYYDITVLLEALKLKDC 755
MA YHEKQ L CA+H LNNLFQE+ + + S L++I K L D WINP++ ++ +G YDI V++ AL+ K C
Sbjct: 1 MARPYHEKQVLSLCALHALNNLFQERGSYSKSELDEICKHLSDE-------------WINPHRSMLG-LGNYDINVIMSALQKKGC 72
BLAST of mRNA_A-nodosum_M_contig997.24.2 vs. uniprot
Match: UPI000A29B53D (josephin-like protein n=1 Tax=Arabidopsis lyrata subsp. lyrata TaxID=81972 RepID=UPI000A29B53D) HSP 1 Score: 61.6 bits (148), Expect = 1.660e-7 Identity = 48/140 (34.29%), Postives = 74/140 (52.86%), Query Frame = 3
Query: 501 MASMYHEKQYLMHCAVHTLNNLFQEQWA-TASLLEDIAKELFDRDVSMRKEAGMGGMWINPYKCVVPRVGYYDITVLLEALKLKDCHVSVHAVFNPKDPAAVARSTKDLDPRSGVRGVVVNRVTLSVLGGLVTGSHYYAI 917
MA +YHE+Q L C +H+LNNLFQE+ A T L IA++L D D + + + + P+ + G YD+ V+++AL+ K V V++ K A S DLD + G+V+N V + GGL H+ +
Sbjct: 1 MAKIYHERQRLQFCLLHSLNNLFQEKDAFTKESLNSIAEKLVDDDPNKETWTPLSFL-LKPHHNTL--TGNYDVNVMIKALEGKGKSV----VWHDKRCGA---SLIDLDDADTLMGIVLN-VPVKRYGGLWRSRHWVVV 129
BLAST of mRNA_A-nodosum_M_contig997.24.2 vs. uniprot
Match: A0A813SSD2_9BILA (Ubiquitinyl hydrolase 1 n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A813SSD2_9BILA) HSP 1 Score: 62.8 bits (151), Expect = 1.990e-7 Identity = 56/237 (23.63%), Postives = 104/237 (43.88%), Query Frame = 3
Query: 480 SSISKTTMASMYHEKQYLMHCAVHTLNNLFQEQWATASLLEDIAKELFDRDVSMRKEAGMGGMWINPYKCVVPRVGYYDITVLLEALKLKDCHVSVHAVFNPKDPAAVARSTKDLDPRSGVRGVVVNRVTLSVLGGLVTGSHYYAIVPWVRGTRPAIHHSAESEPLLSTPVVNDTKPSATPEAGSSEHAVRFTDGDDIVWYVVDSKAPEPELIGGVAELALHLGMEAREHQAHVFVI 1190
++ S + ++YHEKQ CA+HTLNNLFQ+ + T L+ I EL ++ W+NP++ + R G Y+I ++++AL+L+D H ++ F+ + + + ++G ++N + + G++ +PW R +H V + D V+Y +DSK EPE+IG +L +L + +F++
Sbjct: 12 ANSSNQQLNNIYHEKQKKELCALHTLNNLFQDNFYTKQKLDQICIELCPQE------------WLNPHRGLFGR-GNYNINIIMKALQLRD-HEAIW--FDKRRSVTILNF-------ANIKGFILNIPSDYKIAGILP-------LPWER-----------------------------------KHWVAISRIGD-VYYNLDSKLDEPEIIGDELKLTAYLDNLIKCKDKELFLV 182
BLAST of mRNA_A-nodosum_M_contig997.24.2 vs. uniprot
Match: A0A0N4UXL3_ENTVE (Ubiquitinyl hydrolase 1 n=1 Tax=Enterobius vermicularis TaxID=51028 RepID=A0A0N4UXL3_ENTVE) HSP 1 Score: 62.4 bits (150), Expect = 2.150e-7 Identity = 44/145 (30.34%), Postives = 71/145 (48.97%), Query Frame = 3
Query: 483 SISKTTMASMYHEKQYLMHCAVHTLNNLFQEQWATASLLEDIAKELFDRDVSMRKEAGMGGMWINPYKCVVPRVGYYDITVLLEALKLKDCHVSVHAVFNPKDPAAVARSTKDLDPRSGVRGVVVNRVTLSVLGGLVTGSHYYAI 917
+++ ++ S+YHEKQ+L C +HTLN+LFQ + + S L+ IA+ L W N ++ + G YD+ VL AL+ +DC V F+ + A++ D+D V G V N S G H++A+
Sbjct: 10 NVASSSNLSLYHEKQHLQLCLLHTLNSLFQRKEFSKSDLDSIAENLHS------------SYWFNKHRSIWG-TGNYDVNVLFAALETRDCSV---VWFDARRSASII----DMDK---VLGFVFNTPPTSSFIPFWRGRHWFAV 131
BLAST of mRNA_A-nodosum_M_contig997.24.2 vs. uniprot
Match: UPI001FB05C1C (josephin-like protein n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB05C1C) HSP 1 Score: 62.4 bits (150), Expect = 2.190e-7 Identity = 49/142 (34.51%), Postives = 68/142 (47.89%), Query Frame = 3
Query: 510 MYHEKQYLMHCAVHTLNNLFQEQWA-TASLLEDIAKELFDRDVSMRKEAGMGGMWINPYKCVV-----PRVGYYDITVLLEALKLKDCHVSVHAVFNPKDPAAVARSTKDLDPRSGVRGVVVNRVTLSVLGGLVTGSHYYAI 917
+YHE+Q L C +H+LNNLFQ++ A T L IA+ L D + + G W P ++ P G YDI VL+ AL+ V H D A S DP + G+VVN + + GGL H++AI
Sbjct: 9 IYHERQRLQFCLLHSLNNLFQDKNAFTREELNAIAERLVLNDPNT---FSISGSWKTPLSVILKPHYNPLTGNYDINVLITALEGMGKSVVWH------DRRNKAASIDLDDPEGRLMGIVVN-IAVRKFGGLWKSRHWFAI 140 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig997.24.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig997.24.2 >prot_A-nodosum_M_contig997.24.2 ID=prot_A-nodosum_M_contig997.24.2|Name=mRNA_A-nodosum_M_contig997.24.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=256bp MASMYHEKQYLMHCAVHTLNNLFQEQWATASLLEDIAKELFDRDVSMRKEback to top mRNA from alignment at A-nodosum_M_contig997:175478..179692+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig997.24.2 ID=mRNA_A-nodosum_M_contig997.24.2|Name=mRNA_A-nodosum_M_contig997.24.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=4215bp|location=Sequence derived from alignment at A-nodosum_M_contig997:175478..179692+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig997:175478..179692+ >mRNA_A-nodosum_M_contig997.24.2 ID=mRNA_A-nodosum_M_contig997.24.2|Name=mRNA_A-nodosum_M_contig997.24.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=768bp|location=Sequence derived from alignment at A-nodosum_M_contig997:175478..179692+ (Ascophyllum nodosum dioecious)back to top |