prot_A-nodosum_M_contig9948.5.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig9948.5.1
Unique Nameprot_A-nodosum_M_contig9948.5.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length45
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig9948.5.1 vs. uniprot
Match: A0A090F1V7_MESPL (Uncharacterized protein n=2 Tax=Mesorhizobium TaxID=68287 RepID=A0A090F1V7_MESPL)

HSP 1 Score: 51.2 bits (121), Expect = 2.120e-7
Identity = 27/45 (60.00%), Postives = 32/45 (71.11%), Query Frame = 0 
Query:    1 RATNDALVDVAIIGAGPAGLALAVGLKEKGVRVKVFEAAPEISER 45
            R+ N   +DVAIIGAGPAGL  A  L+E G+RVKVFEA P +  R
Sbjct:    4 RSRNQPDLDVAIIGAGPAGLRTAYHLRESGLRVKVFEALPHVGGR 48
[Close]
BLAST of mRNA_A-nodosum_M_contig9948.5.1 vs. uniprot
Match: UPI00042072AD (FAD-dependent monooxygenase n=1 Tax=Azorhizobium doebereinerae TaxID=281091 RepID=UPI00042072AD)

HSP 1 Score: 48.1 bits (113), Expect = 3.920e-5
Identity = 22/36 (61.11%), Postives = 30/36 (83.33%), Query Frame = 0 
Query:    7 LVDVAIIGAGPAGLALAVGLKEKGVRVKVFEAAPEI 42
            ++D+AIIGAGP GLA A+ L +KG R K++EAAPE+
Sbjct:    1 MLDIAIIGAGPGGLATALRLHQKGFRPKIYEAAPEL 36
[Close]
BLAST of mRNA_A-nodosum_M_contig9948.5.1 vs. uniprot
Match: UPI0018CB1159 (flavin-dependent oxidoreductase n=1 Tax=Brevundimonas sp. BAL450 TaxID=1708162 RepID=UPI0018CB1159)

HSP 1 Score: 47.8 bits (112), Expect = 5.360e-5
Identity = 22/37 (59.46%), Postives = 31/37 (83.78%), Query Frame = 0 
Query:    8 VDVAIIGAGPAGLALAVGLKEKGVRVKVFEAAPEISE 44
            +D+AIIG G  GLALA+GL ++GVR +V+EAAP++ E
Sbjct:    1 MDIAIIGGGIVGLALALGLHKRGVRARVYEAAPQVRE 37
[Close]
BLAST of mRNA_A-nodosum_M_contig9948.5.1 vs. uniprot
Match: A0A345P563_9GAMM (Alkyl hydroperoxide reductase subunit F n=1 Tax=Aquirhabdus parva TaxID=2283318 RepID=A0A345P563_9GAMM)

HSP 1 Score: 47.8 bits (112), Expect = 5.370e-5
Identity = 20/40 (50.00%), Postives = 31/40 (77.50%), Query Frame = 0 
Query:    1 RATNDALVDVAIIGAGPAGLALAVGLKEKGVRVKVFEAAP 40
            + TND ++DV IIGAGPAG ALA+ L+ +G+ +++ + AP
Sbjct:    3 KKTNDKIIDVLIIGAGPAGTALAIDLQRRGLNIRIVDKAP 42
[Close]
BLAST of mRNA_A-nodosum_M_contig9948.5.1 vs. uniprot
Match: UPI00049829EA (FAD-dependent monooxygenase n=1 Tax=Rhizorhabdus wittichii TaxID=160791 RepID=UPI00049829EA)

HSP 1 Score: 47.4 bits (111), Expect = 7.310e-5
Identity = 23/36 (63.89%), Postives = 28/36 (77.78%), Query Frame = 0 
Query:    9 DVAIIGAGPAGLALAVGLKEKGVRVKVFEAAPEISE 44
            D+AIIG G  GLALA+GL  +GVR  V+EAAPE+ E
Sbjct:    6 DIAIIGGGIVGLALAIGLHRRGVRATVYEAAPELRE 41
[Close]
BLAST of mRNA_A-nodosum_M_contig9948.5.1 vs. uniprot
Match: UPI001F1FFDEA (FAD-dependent monooxygenase n=1 Tax=Microbacterium chengjingii TaxID=2769067 RepID=UPI001F1FFDEA)

HSP 1 Score: 47.4 bits (111), Expect = 7.340e-5
Identity = 21/39 (53.85%), Postives = 31/39 (79.49%), Query Frame = 0 
Query:    4 NDALVDVAIIGAGPAGLALAVGLKEKGVRVKVFEAAPEI 42
             + ++D+AIIGAGPAGLA A+ L +KG R +++EA PE+
Sbjct:   16 KNTMLDIAIIGAGPAGLAAALRLHQKGFRPRIYEAVPEL 54
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9948.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A090F1V7_MESPL2.120e-760.00Uncharacterized protein n=2 Tax=Mesorhizobium TaxI... [more]
UPI00042072AD3.920e-561.11FAD-dependent monooxygenase n=1 Tax=Azorhizobium d... [more]
UPI0018CB11595.360e-559.46flavin-dependent oxidoreductase n=1 Tax=Brevundimo... [more]
A0A345P563_9GAMM5.370e-550.00Alkyl hydroperoxide reductase subunit F n=1 Tax=Aq... [more]
UPI00049829EA7.310e-563.89FAD-dependent monooxygenase n=1 Tax=Rhizorhabdus w... [more]
UPI001F1FFDEA7.340e-553.85FAD-dependent monooxygenase n=1 Tax=Microbacterium... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00419ADXRDTASEcoord: 32..45
score: 27.04
coord: 9..31
score: 49.38
NoneNo IPR availablePFAMPF13450NAD_binding_8coord: 12..43
e-value: 1.5E-7
score: 31.5
NoneNo IPR availablePIRSRPIRSR000362-1PIRSR000362-1coord: 9..40
e-value: 0.0029
score: 14.1
NoneNo IPR availablePIRSRPIRSR000238-1PIRSR000238-1coord: 4..35
e-value: 2.5E-4
score: 16.9
IPR036188FAD/NAD(P)-binding domain superfamilyGENE3D3.50.50.60coord: 8..45
e-value: 1.9E-12
score: 49.4
IPR036188FAD/NAD(P)-binding domain superfamilySUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 8..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9948contigA-nodosum_M_contig9948:13607..13741 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9948.5.1mRNA_A-nodosum_M_contig9948.5.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig9948 13607..13741 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig9948.5.1 ID=prot_A-nodosum_M_contig9948.5.1|Name=mRNA_A-nodosum_M_contig9948.5.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=45bp
RATNDALVDVAIIGAGPAGLALAVGLKEKGVRVKVFEAAPEISER
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036188FAD/NAD-bd_sf