prot_A-nodosum_M_contig9934.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig9934.1.1
Unique Nameprot_A-nodosum_M_contig9934.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length122
Homology
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BLAST of mRNA_A-nodosum_M_contig9934.1.1 vs. uniprot
Match: A0A6H5KCV4_9PHAE (Exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCV4_9PHAE)

HSP 1 Score: 168 bits (426), Expect = 5.900e-47
Identity = 84/105 (80.00%), Postives = 94/105 (89.52%), Query Frame = 0 
Query:    1 MVYTKAGLELARATFVNVKGEIVYDELVKPTGMMTDFNTQFSGITYEMLKGVTRTLRDAQAEILEFVGAETYLVGHSLESDLRALKIVHRRLIDTSELYPSTRAV 105
            MVYT  GLELARAT VNVKG++VYD+LVKPT  +TD+NTQFSGIT EMLKGVTRTLRDAQ EIL FV AETYLVGHSL+SDLRAL++VHRRLIDTSELYP+ R +
Sbjct:  494 MVYTSEGLELARATLVNVKGQMVYDKLVKPTLKVTDYNTQFSGITPEMLKGVTRTLRDAQREILSFVDAETYLVGHSLDSDLRALRLVHRRLIDTSELYPNPRGI 598
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BLAST of mRNA_A-nodosum_M_contig9934.1.1 vs. uniprot
Match: D7FQ11_ECTSI (Exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ11_ECTSI)

HSP 1 Score: 167 bits (424), Expect = 8.350e-46
Identity = 85/116 (73.28%), Postives = 98/116 (84.48%), Query Frame = 0 
Query:    1 MVYTKAGLELARATFVNVKGEIVYDELVKPTGMMTDFNTQFSGITYEMLKGVTRTLRDAQAEILEFVGAETYLVGHSLESDLRALKIVHRRLIDTSELYPSTRAVILWSAQRDLTQ 116
            M+YT  GLELARAT VNVKG+ VYD+LVKPT  +TD+NTQFSGIT EMLKGVTRTLRDAQ EIL FV AETYLVGHSL+SDLRAL++VHRRLIDTSELYP+ R +   +  R L++
Sbjct:  556 MIYTSEGLELARATLVNVKGQTVYDKLVKPTLKVTDYNTQFSGITPEMLKGVTRTLRDAQREILSFVDAETYLVGHSLDSDLRALRLVHRRLIDTSELYPNLRGIPFKNGLRVLSK 671
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BLAST of mRNA_A-nodosum_M_contig9934.1.1 vs. uniprot
Match: A0A7S3XWP5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWP5_HETAK)

HSP 1 Score: 133 bits (335), Expect = 1.460e-37
Identity = 62/114 (54.39%), Postives = 89/114 (78.07%), Query Frame = 0 
Query:    3 YTKAGLELARATFVNVKGEIVYDELVKPTGMMTDFNTQFSGITYEMLKGVTRTLRDAQAEILEFVGAETYLVGHSLESDLRALKIVHRRLIDTSELYPSTRAVILWSAQRDLTQ 116
            YT+AGLEL R T VN K E +YD +VKP   +TDFNTQ+SGIT + ++G T  L++AQA+++EF+G ETY+ GHS++SDLRALK++H R+IDT+ LYPS R +   ++ ++LT+
Sbjct:    1 YTEAGLELTRVTLVNHKSETLYDTIVKPARPITDFNTQYSGITEKDMQGPTVNLQEAQAKLMEFIGPETYVAGHSIDSDLRALKLIHHRIIDTAVLYPSPRGLPFKNSLKNLTK 114
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BLAST of mRNA_A-nodosum_M_contig9934.1.1 vs. uniprot
Match: A0A444Z2Y9_ARAHY (Exonuclease domain-containing protein n=8 Tax=Arachis TaxID=3817 RepID=A0A444Z2Y9_ARAHY)

HSP 1 Score: 125 bits (315), Expect = 2.400e-31
Identity = 65/116 (56.03%), Postives = 80/116 (68.97%), Query Frame = 0 
Query:    1 MVYTKAGLELARATFVNVKGEIVYDELVKPTGMMTDFNTQFSGITYEMLKGVTRTLRDAQAEILEFVGAETYLVGHSLESDLRALKIVHRRLIDTSELYPSTRAVILWSAQRDLTQ 116
            M  T  G EL R T VN+ G++V D+LVKP+  + D+NT+FSGITYEML GVT TLRD Q E LE V  ET+LVGHSLE+DL ALKI H  +IDT+ LY + R     +A R L +
Sbjct:  226 MCITTEGFELTRVTLVNINGQVVIDKLVKPSNDIVDYNTRFSGITYEMLDGVTTTLRDIQKEFLELVYKETFLVGHSLENDLLALKISHDLIIDTAVLYKNPRGASYKTALRHLAK 341
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BLAST of mRNA_A-nodosum_M_contig9934.1.1 vs. uniprot
Match: A0A1Y1IAJ6_KLENI (Exonuclease family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IAJ6_KLENI)

HSP 1 Score: 125 bits (314), Expect = 5.490e-31
Identity = 62/103 (60.19%), Postives = 80/103 (77.67%), Query Frame = 0 
Query:    1 MVYTKAGLELARATFVNVKGEIVYDELVKPTGMMTDFNTQFSGITYEMLKGVTRTLRDAQAEILEFVGAETYLVGHSLESDLRALKIVHRRLIDTSELYPSTR 103
            M YT+AGLEL R T V+ KG+++ D+LVKPT  + D+NT+FSGIT EML+ VT TL+D QAE+LE V AET LVGHSL+SDL+ALK++H   IDT+  +P  R
Sbjct:  398 MCYTEAGLELTRVTLVSGKGKVLLDKLVKPTNPIRDYNTKFSGITAEMLQDVTTTLQDIQAELLELVSAETILVGHSLQSDLQALKLIHGNNIDTALAFPHPR 500
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BLAST of mRNA_A-nodosum_M_contig9934.1.1 vs. uniprot
Match: A0A836CFL3_9STRA (Exonuclease domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFL3_9STRA)

HSP 1 Score: 121 bits (304), Expect = 7.200e-30
Identity = 58/105 (55.24%), Postives = 80/105 (76.19%), Query Frame = 0 
Query:    1 MVYTKAGLELARATFVNVKGEIVYDELVKPTGMMTDFNTQFSGITYEMLKGVTRTLRDAQAEILEFVGAETYLVGHSLESDLRALKIVHRRLIDTSELYPSTRAV 105
            MV TK GLELAR + VN +GE VYD  V+P+  +T+ +T++SGIT   L+GVT TL+D QA++L  + + TYLVGHSL+ DLRAL++VH R+IDT+ LYPS + +
Sbjct:  105 MVETKKGLELARVSLVNARGEAVYDRHVRPSAPVTNHHTEYSGITAAHLEGVTATLKDVQADLLPLLDSHTYLVGHSLDGDLRALRLVHPRIIDTAVLYPSPKGM 209
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BLAST of mRNA_A-nodosum_M_contig9934.1.1 vs. uniprot
Match: UPI000CD9378F (small RNA degrading nuclease 5 isoform X4 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD9378F)

HSP 1 Score: 120 bits (301), Expect = 7.580e-30
Identity = 62/116 (53.45%), Postives = 79/116 (68.10%), Query Frame = 0 
Query:    1 MVYTKAGLELARATFVNVKGEIVYDELVKPTGMMTDFNTQFSGITYEMLKGVTRTLRDAQAEILEFVGAETYLVGHSLESDLRALKIVHRRLIDTSELYPSTRAVILWSAQRDLTQ 116
            M  T  G EL R T ++ KG+++ D+LVKPT  +TD+NT++SGIT EML GVT TL+D Q E L+ V  ET LVGHSLE+DL ALKI H  +IDT+ LY  +R      A R LT+
Sbjct:  218 MCITNEGFELTRVTLIDFKGQVLLDKLVKPTNAITDYNTRYSGITSEMLNGVTTTLKDIQEEFLQIVNRETILVGHSLENDLLALKICHNLVIDTAVLYKHSRGGTYKIALRVLTR 333
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BLAST of mRNA_A-nodosum_M_contig9934.1.1 vs. uniprot
Match: A0A251MR96_PRUPE (Exonuclease domain-containing protein n=7 Tax=Prunus TaxID=3754 RepID=A0A251MR96_PRUPE)

HSP 1 Score: 121 bits (304), Expect = 7.640e-30
Identity = 65/116 (56.03%), Postives = 80/116 (68.97%), Query Frame = 0 
Query:    1 MVYTKAGLELARATFVNVKGEIVYDELVKPTGMMTDFNTQFSGITYEMLKGVTRTLRDAQAEILEFVGAETYLVGHSLESDLRALKIVHRRLIDTSELYPSTRAVILWSAQRDLTQ 116
            M  T  GLEL RAT V +KG++V D+LVKPT  + D+NT+FSGIT EML GVT +L+D Q E L+ V  ET LVGHSLE+DL ALKI H  +IDT+ LY  +R     S  RDL +
Sbjct:  221 MCVTSEGLELTRATLVTIKGKVVLDKLVKPTNTIVDYNTRFSGITSEMLDGVTTSLKDIQDEFLKLVYKETILVGHSLENDLLALKISHNLVIDTAVLYRYSRGGSYKSKLRDLAR 336
[Close]
BLAST of mRNA_A-nodosum_M_contig9934.1.1 vs. uniprot
Match: M5W069_PRUPE (Exonuclease domain-containing protein n=7 Tax=Prunus TaxID=3754 RepID=M5W069_PRUPE)

HSP 1 Score: 121 bits (304), Expect = 8.020e-30
Identity = 65/116 (56.03%), Postives = 80/116 (68.97%), Query Frame = 0 
Query:    1 MVYTKAGLELARATFVNVKGEIVYDELVKPTGMMTDFNTQFSGITYEMLKGVTRTLRDAQAEILEFVGAETYLVGHSLESDLRALKIVHRRLIDTSELYPSTRAVILWSAQRDLTQ 116
            M  T  GLEL RAT V +KG++V D+LVKPT  + D+NT+FSGIT EML GVT +L+D Q E L+ V  ET LVGHSLE+DL ALKI H  +IDT+ LY  +R     S  RDL +
Sbjct:  221 MCVTSEGLELTRATLVTIKGKVVLDKLVKPTNTIVDYNTRFSGITSEMLDGVTTSLKDIQDEFLKLVYKETILVGHSLENDLLALKISHNLVIDTAVLYRYSRGGSYKSKLRDLAR 336
[Close]
BLAST of mRNA_A-nodosum_M_contig9934.1.1 vs. uniprot
Match: A0A200QJK9_9MAGN (Exonuclease n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200QJK9_9MAGN)

HSP 1 Score: 120 bits (302), Expect = 1.570e-29
Identity = 63/116 (54.31%), Postives = 83/116 (71.55%), Query Frame = 0 
Query:    1 MVYTKAGLELARATFVNVKGEIVYDELVKPTGMMTDFNTQFSGITYEMLKGVTRTLRDAQAEILEFVGAETYLVGHSLESDLRALKIVHRRLIDTSELYPSTRAVILWSAQRDLTQ 116
            M  T  G EL RAT V+++G+++ D+LVKP+  + D+NT+FSGIT EMLKGVT TL+D QAE L+ V  ET LVGHSLE+DL ALKI H+ +IDT+ LY + R     S+ R L +
Sbjct:  228 MCITADGFELTRATLVDIEGQVLLDKLVKPSNAILDYNTRFSGITCEMLKGVTTTLKDIQAEFLKLVYKETVLVGHSLENDLLALKISHKLVIDTAILYQNPRGAHYKSSLRVLAR 343
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9934.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCV4_9PHAE5.900e-4780.00Exonuclease domain-containing protein n=1 Tax=Ecto... [more]
D7FQ11_ECTSI8.350e-4673.28Exonuclease domain-containing protein n=1 Tax=Ecto... [more]
A0A7S3XWP5_HETAK1.460e-3754.39Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A444Z2Y9_ARAHY2.400e-3156.03Exonuclease domain-containing protein n=8 Tax=Arac... [more]
A0A1Y1IAJ6_KLENI5.490e-3160.19Exonuclease family protein n=1 Tax=Klebsormidium n... [more]
A0A836CFL3_9STRA7.200e-3055.24Exonuclease domain-containing protein n=1 Tax=Trib... [more]
UPI000CD9378F7.580e-3053.45small RNA degrading nuclease 5 isoform X4 n=1 Tax=... [more]
A0A251MR96_PRUPE7.640e-3056.03Exonuclease domain-containing protein n=7 Tax=Prun... [more]
M5W069_PRUPE8.020e-3056.03Exonuclease domain-containing protein n=7 Tax=Prun... [more]
A0A200QJK9_9MAGN1.570e-2954.31Exonuclease n=1 Tax=Macleaya cordata TaxID=56857 R... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013520Exonuclease, RNase T/DNA polymerase IIISMARTSM00479exoiiienduscoord: 1..117
e-value: 1.3E-6
score: 38.0
IPR013520Exonuclease, RNase T/DNA polymerase IIIPFAMPF00929RNase_Tcoord: 8..92
e-value: 1.5E-7
score: 32.1
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..118
e-value: 5.3E-31
score: 109.5
NoneNo IPR availablePANTHERPTHR12801RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATEDcoord: 1..103
IPR034922RNA exonuclease 1-like, exonuclease domainCDDcd06145REX1_likecoord: 1..116
e-value: 4.44359E-57
score: 171.9
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 7..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9934contigA-nodosum_M_contig9934:6854..7219 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9934.1.1mRNA_A-nodosum_M_contig9934.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig9934 6833..7219 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig9934.1.1 ID=prot_A-nodosum_M_contig9934.1.1|Name=mRNA_A-nodosum_M_contig9934.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=122bp
MVYTKAGLELARATFVNVKGEIVYDELVKPTGMMTDFNTQFSGITYEMLK
GVTRTLRDAQAEILEFVGAETYLVGHSLESDLRALKIVHRRLIDTSELYP
STRAVILWSAQRDLTQVASIP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013520Exonuclease_RNaseT/DNA_pol3
IPR036397RNaseH_sf
IPR034922REX1-like_exo
IPR012337RNaseH-like_sf