mRNA_A-nodosum_M_contig9934.1.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig9934.1.1 vs. uniprot
Match: A0A6H5KCV4_9PHAE (Exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCV4_9PHAE) HSP 1 Score: 182 bits (463), Expect = 3.540e-52 Identity = 90/112 (80.36%), Postives = 101/112 (90.18%), Query Frame = 1
Query: 1 ILGLDCEMVYTKAGLELARATFVNVKGEIVYDELVKPTGMMTDFNTQFSGITYEMLKGVTRTLRDAQAEILEFVGAETYLVGHSLESDLRALKIVHRRLIDTSELYPSTRAV 336
+LGLDCEMVYT GLELARAT VNVKG++VYD+LVKPT +TD+NTQFSGIT EMLKGVTRTLRDAQ EIL FV AETYLVGHSL+SDLRAL++VHRRLIDTSELYP+ R +
Sbjct: 487 MLGLDCEMVYTSEGLELARATLVNVKGQMVYDKLVKPTLKVTDYNTQFSGITPEMLKGVTRTLRDAQREILSFVDAETYLVGHSLDSDLRALRLVHRRLIDTSELYPNPRGI 598
BLAST of mRNA_A-nodosum_M_contig9934.1.1 vs. uniprot
Match: D7FQ11_ECTSI (Exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ11_ECTSI) HSP 1 Score: 182 bits (461), Expect = 1.040e-50 Identity = 91/123 (73.98%), Postives = 105/123 (85.37%), Query Frame = 1
Query: 1 ILGLDCEMVYTKAGLELARATFVNVKGEIVYDELVKPTGMMTDFNTQFSGITYEMLKGVTRTLRDAQAEILEFVGAETYLVGHSLESDLRALKIVHRRLIDTSELYPSTRAVILWSAQRDLTQ 369
+LGLDCEM+YT GLELARAT VNVKG+ VYD+LVKPT +TD+NTQFSGIT EMLKGVTRTLRDAQ EIL FV AETYLVGHSL+SDLRAL++VHRRLIDTSELYP+ R + + R L++
Sbjct: 549 MLGLDCEMIYTSEGLELARATLVNVKGQTVYDKLVKPTLKVTDYNTQFSGITPEMLKGVTRTLRDAQREILSFVDAETYLVGHSLDSDLRALRLVHRRLIDTSELYPNLRGIPFKNGLRVLSK 671
BLAST of mRNA_A-nodosum_M_contig9934.1.1 vs. uniprot
Match: A0A7S3XWP5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWP5_HETAK) HSP 1 Score: 133 bits (335), Expect = 1.910e-37 Identity = 62/114 (54.39%), Postives = 89/114 (78.07%), Query Frame = 1
Query: 28 YTKAGLELARATFVNVKGEIVYDELVKPTGMMTDFNTQFSGITYEMLKGVTRTLRDAQAEILEFVGAETYLVGHSLESDLRALKIVHRRLIDTSELYPSTRAVILWSAQRDLTQ 369
YT+AGLEL R T VN K E +YD +VKP +TDFNTQ+SGIT + ++G T L++AQA+++EF+G ETY+ GHS++SDLRALK++H R+IDT+ LYPS R + ++ ++LT+
Sbjct: 1 YTEAGLELTRVTLVNHKSETLYDTIVKPARPITDFNTQYSGITEKDMQGPTVNLQEAQAKLMEFIGPETYVAGHSIDSDLRALKLIHHRIIDTAVLYPSPRGLPFKNSLKNLTK 114
BLAST of mRNA_A-nodosum_M_contig9934.1.1 vs. uniprot
Match: A0A444Z2Y9_ARAHY (Exonuclease domain-containing protein n=8 Tax=Arachis TaxID=3817 RepID=A0A444Z2Y9_ARAHY) HSP 1 Score: 139 bits (349), Expect = 5.220e-36 Identity = 71/123 (57.72%), Postives = 86/123 (69.92%), Query Frame = 1
Query: 1 ILGLDCEMVYTKAGLELARATFVNVKGEIVYDELVKPTGMMTDFNTQFSGITYEMLKGVTRTLRDAQAEILEFVGAETYLVGHSLESDLRALKIVHRRLIDTSELYPSTRAVILWSAQRDLTQ 369
IL LDCEM T G EL R T VN+ G++V D+LVKP+ + D+NT+FSGITYEML GVT TLRD Q E LE V ET+LVGHSLE+DL ALKI H +IDT+ LY + R +A R L +
Sbjct: 219 ILALDCEMCITTEGFELTRVTLVNINGQVVIDKLVKPSNDIVDYNTRFSGITYEMLDGVTTTLRDIQKEFLELVYKETFLVGHSLENDLLALKISHDLIIDTAVLYKNPRGASYKTALRHLAK 341
BLAST of mRNA_A-nodosum_M_contig9934.1.1 vs. uniprot
Match: A0A836CFL3_9STRA (Exonuclease domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFL3_9STRA) HSP 1 Score: 135 bits (340), Expect = 8.020e-35 Identity = 63/112 (56.25%), Postives = 87/112 (77.68%), Query Frame = 1
Query: 1 ILGLDCEMVYTKAGLELARATFVNVKGEIVYDELVKPTGMMTDFNTQFSGITYEMLKGVTRTLRDAQAEILEFVGAETYLVGHSLESDLRALKIVHRRLIDTSELYPSTRAV 336
+LG+DCEMV TK GLELAR + VN +GE VYD V+P+ +T+ +T++SGIT L+GVT TL+D QA++L + + TYLVGHSL+ DLRAL++VH R+IDT+ LYPS + +
Sbjct: 98 LLGIDCEMVETKKGLELARVSLVNARGEAVYDRHVRPSAPVTNHHTEYSGITAAHLEGVTATLKDVQADLLPLLDSHTYLVGHSLDGDLRALRLVHPRIIDTAVLYPSPKGM 209
BLAST of mRNA_A-nodosum_M_contig9934.1.1 vs. uniprot
Match: UPI000CD9378F (small RNA degrading nuclease 5 isoform X4 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD9378F) HSP 1 Score: 133 bits (335), Expect = 1.230e-34 Identity = 67/123 (54.47%), Postives = 86/123 (69.92%), Query Frame = 1
Query: 1 ILGLDCEMVYTKAGLELARATFVNVKGEIVYDELVKPTGMMTDFNTQFSGITYEMLKGVTRTLRDAQAEILEFVGAETYLVGHSLESDLRALKIVHRRLIDTSELYPSTRAVILWSAQRDLTQ 369
I+G+DCEM T G EL R T ++ KG+++ D+LVKPT +TD+NT++SGIT EML GVT TL+D Q E L+ V ET LVGHSLE+DL ALKI H +IDT+ LY +R A R LT+
Sbjct: 211 IVGVDCEMCITNEGFELTRVTLIDFKGQVLLDKLVKPTNAITDYNTRYSGITSEMLNGVTTTLKDIQEEFLQIVNRETILVGHSLENDLLALKICHNLVIDTAVLYKHSRGGTYKIALRVLTR 333
BLAST of mRNA_A-nodosum_M_contig9934.1.1 vs. uniprot
Match: A0A7S1SV13_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SV13_9CHLO) HSP 1 Score: 125 bits (315), Expect = 1.450e-34 Identity = 63/122 (51.64%), Postives = 85/122 (69.67%), Query Frame = 1
Query: 1 ILGLDCEMVYTKAGLELARATFVNVKGEIVYDELVKPTGMMTDFNTQFSGITYEMLKGVTRTLRDAQAEILEFVGAETYLVGHSLESDLRALKIVHRRLIDTSELYPSTRAVILWSAQRDLT 366
++GLDCEM T AGLEL R T VN +V DELVKP+ + D+NT+FSGIT +ML GVT +L DA+A++++ V T LVGH L++DLRAL+++H +DTS LYP + SA R L+
Sbjct: 8 LMGLDCEMCITAAGLELTRVTLVNEHDTVVVDELVKPSNPILDYNTRFSGITEDMLSGVTTSLEDARAKVIKVVKDTTMLVGHGLDNDLRALRLLHANCLDTSILYPHPKGPPARSALRYLS 129
BLAST of mRNA_A-nodosum_M_contig9934.1.1 vs. uniprot
Match: A0A1Y1IAJ6_KLENI (Exonuclease family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IAJ6_KLENI) HSP 1 Score: 135 bits (339), Expect = 2.890e-34 Identity = 65/110 (59.09%), Postives = 86/110 (78.18%), Query Frame = 1
Query: 1 ILGLDCEMVYTKAGLELARATFVNVKGEIVYDELVKPTGMMTDFNTQFSGITYEMLKGVTRTLRDAQAEILEFVGAETYLVGHSLESDLRALKIVHRRLIDTSELYPSTR 330
++ +DCEM YT+AGLEL R T V+ KG+++ D+LVKPT + D+NT+FSGIT EML+ VT TL+D QAE+LE V AET LVGHSL+SDL+ALK++H IDT+ +P R
Sbjct: 391 MVAVDCEMCYTEAGLELTRVTLVSGKGKVLLDKLVKPTNPIRDYNTKFSGITAEMLQDVTTTLQDIQAELLELVSAETILVGHSLQSDLQALKLIHGNNIDTALAFPHPR 500
BLAST of mRNA_A-nodosum_M_contig9934.1.1 vs. uniprot
Match: A0A200QJK9_9MAGN (Exonuclease n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200QJK9_9MAGN) HSP 1 Score: 134 bits (336), Expect = 3.620e-34 Identity = 69/123 (56.10%), Postives = 89/123 (72.36%), Query Frame = 1
Query: 1 ILGLDCEMVYTKAGLELARATFVNVKGEIVYDELVKPTGMMTDFNTQFSGITYEMLKGVTRTLRDAQAEILEFVGAETYLVGHSLESDLRALKIVHRRLIDTSELYPSTRAVILWSAQRDLTQ 369
IL LDCEM T G EL RAT V+++G+++ D+LVKP+ + D+NT+FSGIT EMLKGVT TL+D QAE L+ V ET LVGHSLE+DL ALKI H+ +IDT+ LY + R S+ R L +
Sbjct: 221 ILALDCEMCITADGFELTRATLVDIEGQVLLDKLVKPSNAILDYNTRFSGITCEMLKGVTTTLKDIQAEFLKLVYKETVLVGHSLENDLLALKISHKLVIDTAILYQNPRGAHYKSSLRVLAR 343
BLAST of mRNA_A-nodosum_M_contig9934.1.1 vs. uniprot
Match: A0A251MR96_PRUPE (Exonuclease domain-containing protein n=7 Tax=Prunus TaxID=3754 RepID=A0A251MR96_PRUPE) HSP 1 Score: 133 bits (335), Expect = 4.450e-34 Identity = 70/123 (56.91%), Postives = 86/123 (69.92%), Query Frame = 1
Query: 1 ILGLDCEMVYTKAGLELARATFVNVKGEIVYDELVKPTGMMTDFNTQFSGITYEMLKGVTRTLRDAQAEILEFVGAETYLVGHSLESDLRALKIVHRRLIDTSELYPSTRAVILWSAQRDLTQ 369
+L LDCEM T GLEL RAT V +KG++V D+LVKPT + D+NT+FSGIT EML GVT +L+D Q E L+ V ET LVGHSLE+DL ALKI H +IDT+ LY +R S RDL +
Sbjct: 214 MLALDCEMCVTSEGLELTRATLVTIKGKVVLDKLVKPTNTIVDYNTRFSGITSEMLDGVTTSLKDIQDEFLKLVYKETILVGHSLENDLLALKISHNLVIDTAVLYRYSRGGSYKSKLRDLAR 336 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9934.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig9934.1.1 >prot_A-nodosum_M_contig9934.1.1 ID=prot_A-nodosum_M_contig9934.1.1|Name=mRNA_A-nodosum_M_contig9934.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=122bp MVYTKAGLELARATFVNVKGEIVYDELVKPTGMMTDFNTQFSGITYEMLKback to top mRNA from alignment at A-nodosum_M_contig9934:6833..7219+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig9934.1.1 ID=mRNA_A-nodosum_M_contig9934.1.1|Name=mRNA_A-nodosum_M_contig9934.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=387bp|location=Sequence derived from alignment at A-nodosum_M_contig9934:6833..7219+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig9934:6833..7219+ >mRNA_A-nodosum_M_contig9934.1.1 ID=mRNA_A-nodosum_M_contig9934.1.1|Name=mRNA_A-nodosum_M_contig9934.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=366bp|location=Sequence derived from alignment at A-nodosum_M_contig9934:6833..7219+ (Ascophyllum nodosum dioecious)back to top |