prot_A-nodosum_M_contig99.83.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig99.83.1
Unique Nameprot_A-nodosum_M_contig99.83.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length143
Homology
BLAST of mRNA_A-nodosum_M_contig99.83.1 vs. uniprot
Match: D7G1I1_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D7G1I1_ECTSI)

HSP 1 Score: 184 bits (466), Expect = 1.290e-55
Identity = 91/142 (64.08%), Postives = 108/142 (76.06%), Query Frame = 0
Query:    1 MSGEARTNAVRPSERLGSRGRFTSGVRQWLGGAPRDMAIMGETDHGKVI--SVSSELKPELSWGGETNVIGGRDDERHGRIGSFDHGVVEVSGGPLHMPAL---EDLVLWSEPGQTENKFRRCGPSHFVAGVSIFSGGMPMY 137
            +S EARTNA+RP ERLGSRGRFT+GVR W+GG PRD+ +    D G V+  S S   +P +S+ GETNV GGR+DERHGR+GSF+HGVVE  GGPL + A    E  +LW E GQ ENK+RRCGPSHFVAGVSI SGGMP+Y
Sbjct:  127 LSAEARTNAIRPKERLGSRGRFTAGVRGWVGGKPRDVPLPRLRDPGTVLFESASERSRPSMSFSGETNVSGGREDERHGRLGSFEHGVVEARGGPLQVQAAFASEVELLWHEGGQKENKYRRCGPSHFVAGVSILSGGMPVY 268          
BLAST of mRNA_A-nodosum_M_contig99.83.1 vs. uniprot
Match: A0A6H5KBU2_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU2_9PHAE)

HSP 1 Score: 180 bits (456), Expect = 7.410e-55
Identity = 92/142 (64.79%), Postives = 107/142 (75.35%), Query Frame = 0
Query:    1 MSGEARTNAVRPSERLGSRGRFTSGVRQWLGGAPRDMAIMGETDHGKVI--SVSSELKPELSWGGETNVIGGRDDERHGRIGSFDHGVVEVSGGPLHMPAL--EDLV-LWSEPGQTENKFRRCGPSHFVAGVSIFSGGMPMY 137
            +S EARTNAVRP+ERLGSRGRFT+GVR+W GG PRD+ +    D G V+  S S   +P LS+  ETNV GGR DERHGR+GSF+HGVVE  GGPL + A    D+  LW E GQ ENK+RRCGPSHFVAGVSI SGGMP+Y
Sbjct:   69 LSAEARTNAVRPTERLGSRGRFTAGVRRWAGGEPRDVPLPRVCDPGTVLFESASERSRPSLSFSRETNVSGGRQDERHGRLGSFEHGVVEARGGPLQVQAAFARDVEQLWHEGGQKENKYRRCGPSHFVAGVSILSGGMPVY 210          
BLAST of mRNA_A-nodosum_M_contig99.83.1 vs. uniprot
Match: D7FZE3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZE3_ECTSI)

HSP 1 Score: 180 bits (456), Expect = 2.930e-51
Identity = 91/142 (64.08%), Postives = 106/142 (74.65%), Query Frame = 0
Query:    1 MSGEARTNAVRPSERLGSRGRFTSGVRQWLGGAPRDMAIMGETDHGKVI--SVSSELKPELSWGGETNVIGGRDDERHGRIGSFDHGVVEVSGGPLHMPAL---EDLVLWSEPGQTENKFRRCGPSHFVAGVSIFSGGMPMY 137
            +S EAR NA RP+ERLGSRGRFT+GVR+W GG PRD+ +    D G V+  S S   +P LS+ GETNV GGR+DERHGR+GSF+HGVVE  GGPL + A    E   LW E GQ ENK+RRCGPSHFVAGVSI SGGMP+Y
Sbjct:  416 LSAEARINATRPTERLGSRGRFTAGVRRWGGGEPRDVPLPRVRDPGTVLFESASERSRPSLSFSGETNVSGGREDERHGRLGSFEHGVVEARGGPLQVQAAFASEVEQLWHEGGQKENKYRRCGPSHFVAGVSILSGGMPVY 557          
BLAST of mRNA_A-nodosum_M_contig99.83.1 vs. uniprot
Match: A0A6H5KZP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZP0_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 5.400e-31
Identity = 66/132 (50.00%), Postives = 81/132 (61.36%), Query Frame = 0
Query:    9 AVRPSERLGSRGRFTSGVRQWLGGAPRDMAIMGETDHGKVI--SVSSELKPELSWGGETNVIGGRDDERHGRIGSFDHGVVEVSGGPLHMPAL---EDLVLWSEPGQTENKFRRCGPSHFVAGVSIFSGGMP 135
            A+RP+ERLGSRGRFTSG+R W GG P D+ +    D G V+  S S   +P LS+ GETNV GG++DE                GGPL + A    E  +LW E GQ E+K+RRCGPSH+V GVSI  G MP
Sbjct:  103 AIRPTERLGSRGRFTSGIRGWAGGKPPDVTLPRVRDPGTVLFESASERSRPSLSFSGETNVSGGKEDE--------------ARGGPLQVQAAFTSEVELLWREGGQREHKYRRCGPSHYVTGVSIPFGDMP 220          
BLAST of mRNA_A-nodosum_M_contig99.83.1 vs. uniprot
Match: A0A6H5KAW1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAW1_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 1.430e-21
Identity = 60/124 (48.39%), Postives = 73/124 (58.87%), Query Frame = 0
Query:    1 MSGEARTNAVRPSERLGSRGRFTSGVRQWLGGAPRDMAIMGETDHGKVISVSSELKPELSWGGETNVIGGRDDERHGRIGSFDHGVVEVSGG-PLHMPALEDLVLWSEPGQT--ENKFRRCGPS 121
            +S EARTNAVRP ERLG+RGRFT G R+W GG PRD+ +  E DHGKV+ VS+  KP+LS    TN +  R  ER G  G F  GV   +GG P  +P    L    +PG    E+   R  PS
Sbjct:   87 LSAEARTNAVRPMERLGARGRFTPGGRRWAGGKPRDVPLEAEVDHGKVLFVSAVHKPDLSAEARTNAV--RPTERLGSRGRFTAGVRRWAGGEPRDVP----LPRVCDPGTVLFESASERSRPS 204          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig99.83.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G1I1_ECTSI1.290e-5564.08Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2... [more]
A0A6H5KBU2_9PHAE7.410e-5564.79Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
D7FZE3_ECTSI2.930e-5164.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KZP0_9PHAE5.400e-3150.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KAW1_9PHAE1.430e-2148.39Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig99contigA-nodosum_M_contig99:858462..858890 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig99.83.1mRNA_A-nodosum_M_contig99.83.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig99 858446..860008 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig99.83.1 ID=prot_A-nodosum_M_contig99.83.1|Name=mRNA_A-nodosum_M_contig99.83.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=143bp
MSGEARTNAVRPSERLGSRGRFTSGVRQWLGGAPRDMAIMGETDHGKVIS
VSSELKPELSWGGETNVIGGRDDERHGRIGSFDHGVVEVSGGPLHMPALE
DLVLWSEPGQTENKFRRCGPSHFVAGVSIFSGGMPMYTLASG*
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