prot_A-nodosum_M_contig9885.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig9885.1.1
Unique Nameprot_A-nodosum_M_contig9885.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length189
Homology
BLAST of mRNA_A-nodosum_M_contig9885.1.1 vs. uniprot
Match: A0A6H5JJG6_9PHAE (SWIM-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJG6_9PHAE)

HSP 1 Score: 305 bits (781), Expect = 1.210e-95
Identity = 150/203 (73.89%), Postives = 166/203 (81.77%), Query Frame = 0
Query:    1 ENHDGTDKQYVVLGMKDGGHLCSCRTLQELGLCCRHFWAAMRLSRKYKFHVGILNQHWLAEQGRKPTSEWPEGAKPIWTVAKNHTPLTE-EVQALLVSTV-------------GDGVRLKWNADNTTIESSLMKLKETGPTPQDRRYLYVDCLKEATAAVGLGVETVPPDALRALVQQFVQGVNMAGRIGSRTGISVGNPHVV 189
            ENHDGTDK+Y+VLGM DG HLCSCRTLQELGLCCRHFWAAMRLSR+YKFHVGILNQHWLAEQGRKPTSEWPEGAKP W VA NH  L+E E QA LV+T              G G  ++W+A N TIESSL++LKETGPTPQDRR+LYVDCLKEATAAV LGVETVPP+ALRALV+QF QGV+ A RIGS  G++V NP VV
Sbjct:  638 ENHDGTDKRYIVLGMTDGSHLCSCRTLQELGLCCRHFWAAMRLSRRYKFHVGILNQHWLAEQGRKPTSEWPEGAKPTWAVALNHKALSEGEKQAPLVATGRLQCATEGDEGGGGAGAGVQWDAGNVTIESSLVQLKETGPTPQDRRFLYVDCLKEATAAVSLGVETVPPEALRALVRQFKQGVHQASRIGSSAGLAVANPAVV 840          
BLAST of mRNA_A-nodosum_M_contig9885.1.1 vs. uniprot
Match: D7FLA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLA8_ECTSI)

HSP 1 Score: 171 bits (434), Expect = 2.610e-48
Identity = 91/143 (63.64%), Postives = 107/143 (74.83%), Query Frame = 0
Query:   61 EQGRKPTSEWPEGAKPIWTVAKNHTPLTE-EVQALLVSTV-------------GDGVRLKWNADNTTIESSLMKLKETGPTPQDRRYLYVDCLKEATAAVGLGVETVPPDALRALVQQFVQGVNMAGRIGSRTGISVGNPHVV 189
            ++GR+ T+EWPEGAKP W V KNH  L+E E QA LV+T              G G  ++W+A N TIESSL++LKETGPTPQDRR+LYVDCLKEATAAV LGVETVPP+ALRALVQQF QGV+ A RIGS  G++V NP VV
Sbjct:  253 QRGRRATTEWPEGAKPKWAVTKNHEALSEGEQQAPLVATGRLQCATDGDKGGGGAGGGVQWDAGNVTIESSLVQLKETGPTPQDRRFLYVDCLKEATAAVSLGVETVPPEALRALVQQFKQGVHQASRIGSSAGLAVANPAVV 395          
BLAST of mRNA_A-nodosum_M_contig9885.1.1 vs. uniprot
Match: A0A6H5JCK5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK5_9PHAE)

HSP 1 Score: 135 bits (341), Expect = 9.020e-38
Identity = 66/90 (73.33%), Postives = 77/90 (85.56%), Query Frame = 0
Query:  100 GDGVRLKWNADNTTIESSLMKLKETGPTPQDRRYLYVDCLKEATAAVGLGVETVPPDALRALVQQFVQGVNMAGRIGSRTGISVGNPHVV 189
            G G  ++W+A N TIESSL++LKETGPTPQDRR+LYVDCLKEATAAV LGVETVPP+ALRALV+QF QGV+ A RIGS  G++V NP VV
Sbjct:    6 GAGAGVQWDAGNVTIESSLVQLKETGPTPQDRRFLYVDCLKEATAAVSLGVETVPPEALRALVRQFKQGVHQASRIGSSAGLAVANPAVV 95          
BLAST of mRNA_A-nodosum_M_contig9885.1.1 vs. uniprot
Match: A0A6H5JBU5_9PHAE (SWIM-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBU5_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 3.130e-37
Identity = 73/146 (50.00%), Postives = 96/146 (65.75%), Query Frame = 0
Query:    1 ENHDGTDKQYVVLGMKDGGHLCSCRTLQELGLCCRHFWAAMRLSRKYKFHVGILNQHWLAEQGRKPTSEWPEGAKPIWTVAKNHTPLTEEVQALL-VSTVGDGVRLKWNA--DNTTIESSLMKLKETGPTPQDRRYLYVDCLKEAT 143
            E+  G   +Y+V  M+DG H+CSCRTLQELGLCCRHFW AMRLS K+KFHVGILN+HWL EQG +    WP   K  W VA  ++  +++ Q     + VGD     W A  +N TIE+ L ++ +TG + QDRR L+V+ LK+ T
Sbjct:  354 ESRYGRVMRYIVCSMQDGSHICSCRTLQELGLCCRHFWQAMRLSPKFKFHVGILNRHWLTEQGLRELEAWPPECKQ-WMVALVNSDASKDDQVRPPTAMVGD----TWQAIPENATIETRLQRVAQTGQSSQDRRLLFVEMLKKTT 494          
BLAST of mRNA_A-nodosum_M_contig9885.1.1 vs. uniprot
Match: A0A6H5JMX3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMX3_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 7.200e-35
Identity = 75/143 (52.45%), Postives = 95/143 (66.43%), Query Frame = 0
Query:   54 LNQHWLAEQGRKPTSEWPEGAKPIWTVAKNHTPLTEEVQALLVSTVGD------GVRLKWNADNTTIESSLMKLKETGPTPQDRRYLYVDCLKEATAAVGLGVETVPPDALRALVQQFVQ-GVNMAGRIGSRTGISVGNPHVV 189
            L +    E+  K    +P+  +  W   +    L+  +Q    +T GD      G  ++W+A N TIESSL++LKETGPTPQDRR+LYVDCLKEATAAV LGVETVPP+ALRALV+QF Q GV+ A RIGS  G++V NP VV
Sbjct:   60 LTESGFEEEYAKLIETFPKAKEHFWAAMR----LSRRLQC---ATEGDEGGGGAGAGVQWDAGNVTIESSLVQLKETGPTPQDRRFLYVDCLKEATAAVSLGVETVPPEALRALVRQFKQXGVHQASRIGSSAGLAVANPAVV 195          
BLAST of mRNA_A-nodosum_M_contig9885.1.1 vs. uniprot
Match: A0A6H5JUZ2_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUZ2_9PHAE)

HSP 1 Score: 132 bits (331), Expect = 3.310e-32
Identity = 76/187 (40.64%), Postives = 102/187 (54.55%), Query Frame = 0
Query:    1 ENHDGTDKQYVVLGMKDGGHLCSCRTLQELGLCCRHFWAAMRLSRKYKFHVGILNQHWLAEQGR-KPTSEWPEGAKPIWTVAKNHTPLTEEVQALLVSTVGDGVRL---KWNA---DNTTIESSLMKLKETGPTPQDRRYLYVDCLKEATAAVGLGVETVPPDALRALVQQFVQGVNM-AGRIGSRT 179
            E  DG    Y+VL   DG HLC CRTLQ LGL CRH WAAM  S +++FH      HWL E+ R  P  +WP+ A+P W V+ ++     EV        G+GV     +W +    + T+++ L+ LKE GPT QDR+ LY D  K+   A  +  +   P    ALV QF+  VNM AG +G+ T
Sbjct:  596 EQRDGKAFDYLVLLFSDGSHLCQCRTLQTLGLFCRHVWAAMMHSPRFRFH------HWLTEKARGTPQQDWPDVARPRWVVSXSNRHAAGEVDGAAGEGEGEGVGGCGGRWKSFVGSSQTVQTVLLDLKEKGPTYQDRKVLYADVTKKLGQAASILSDRFSPTVAVALVDQFLTMVNMQAGGVGTTT 776          
BLAST of mRNA_A-nodosum_M_contig9885.1.1 vs. uniprot
Match: D8LU83_ECTSI (SWIM-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU83_ECTSI)

HSP 1 Score: 126 bits (317), Expect = 1.980e-30
Identity = 64/148 (43.24%), Postives = 86/148 (58.11%), Query Frame = 0
Query:    1 ENHDGTDKQYVVLGMKDGGHLCSCRTLQELGLCCRHFWAAMRLSRKYKFHVGILNQHWLAEQGR-KPTSEWPEGAKPIWTVAKNHTPLTEEVQALLVSTVGDGV---RLKWNA---DNTTIESSLMKLKETGPTPQDRRYLYVDCLKE 141
            E  D     Y+VL   DG HLC CRTLQ L L CRH WAAM  S +++FHVG+L++HWL E+ R  P  +WP+ A+P W V+  H     EV        G+GV     +W +    + T+++ L+ LKE GPT QDR+ LY D  K+
Sbjct:  497 EQRDDKAFDYLVLLFSDGSHLCQCRTLQTLRLFCRHVWAAMMYSPRFRFHVGLLHEHWLTEKARGTPQQDWPDVARPRWVVSNRHA--AREVDGAAGEGEGEGVGGCSGRWKSFVGSSQTVQTVLLDLKEKGPTDQDRQVLYADVTKK 642          
BLAST of mRNA_A-nodosum_M_contig9885.1.1 vs. uniprot
Match: A0A6H5JFD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFD7_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 1.990e-26
Identity = 67/176 (38.07%), Postives = 95/176 (53.98%), Query Frame = 0
Query:    6 TDKQYVVLGMKDGGHLCSCRTLQELGLCCRHFWAAMRLSRKYKFHVGILNQHWLAEQGR-KPTSEWPEGAKPIWTVAKNHTPLTEEVQALLVSTVGDGVRLKWNADNTTIESSLMKLKETGPTPQDRRYLYVDCLKEATAAVGLGVETVPPDALRALVQQFVQGVNM-AGRIGSRT 179
            T   Y+VL   D  HLC CRTLQ LGL CR  WAAM  S +++FHVG+L++HWL E+ R  P  +WP+ A+P W   +  T   E  +       G G        + T+++ ++ LKE GPT QDR+ +Y +  K+   A  +  +   P    A V QF+  VN+ AG  G+ T
Sbjct:  296 TTFDYLVLLFSDVSHLCQCRTLQTLGLFCRQVWAAMMHSPRFRFHVGLLHEHWLTEKARGTPLHDWPDVARPRW---EKWTGRRERERD------GGG-----GXSSQTVQTVVLDLKEKGPTDQDRQVVYANVTKKLGQAASILSDKFSPTVAVARVDQFLATVNVQAGGAGATT 457          
BLAST of mRNA_A-nodosum_M_contig9885.1.1 vs. uniprot
Match: A0A6H5JNB0_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNB0_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 5.710e-25
Identity = 57/156 (36.54%), Postives = 80/156 (51.28%), Query Frame = 0
Query:    4 DGTDKQYVVLGMKDGGHLCSCRTLQELGLCCRHFWAAMRLSRKYKFHVGILNQHWLAEQGR-KPTSEWPEGAKPIWTVAKNHTPLTEEVQALLVSTVGDGVRLKWNA-----------------DNTTIESSLMKLKETGPTPQDRRYLYVDCLKE 141
            DG    Y+VL   DG HLC CRT Q LGL CRH WAAM  S +++FHVG+L+QHWL E+ R  P  +WP+ A+P + V  +    T   +       G+                          + T++++L+ LKE  PT Q+R+ LY D  K+
Sbjct:  567 DGRTFDYLVLLFSDGSHLCQCRTFQTLGLFCRHVWAAMMYSPRFRFHVGLLHQHWLTEKARGTPLQDWPDVARPRFVVISDRHASTAGAKERFEGAAGEXXXXXXXXXXXXXXXXXXXXXXXXXSSQTVQAALLDLKEKEPTDQERQVLYADVTKK 722          
BLAST of mRNA_A-nodosum_M_contig9885.1.1 vs. uniprot
Match: A0A6H5JWW3_9PHAE (MULE domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWW3_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 2.970e-24
Identity = 61/141 (43.26%), Postives = 83/141 (58.87%), Query Frame = 0
Query:   52 GILNQHWLAEQGRKPTSEWPEGAKPIWTVAKNHTPLTEEVQALLVSTV-GDGVRLKWNA--DNTTIESSLMKLKETGPTPQDRRYLYVDCLKEATAAVGLGVETVPPDALRALVQQFVQGVNMAGRIGSRTGISVGNPHVV 189
            G + +HWL EQG +    WP   KP W VA  H+  +++ Q    + V GD     W A  ++ TIE+ L ++ +TG + QDRR LYV+ LK+ATAAV  GV+ VPPD +RA+VQ F   +N A  I S  G  +GNP  V
Sbjct:  412 GRVMRHWLTEQGLRELEAWPPECKPQWMVALVHSDASKDDQVRPPTVVVGD----TWQAIPEDATIETRLQRVAQTGQSCQDRRLLYVEMLKKATAAVSSGVQLVPPDTMRAIVQTFESSMNAAAMISSGQGAVLGNPQAV 548          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9885.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A6H5JJG6_9PHAE1.210e-9573.89SWIM-type domain-containing protein n=2 Tax=Ectoca... [more]
D7FLA8_ECTSI2.610e-4863.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCK5_9PHAE9.020e-3873.33Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBU5_9PHAE3.130e-3750.00SWIM-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5JMX3_9PHAE7.200e-3552.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUZ2_9PHAE3.310e-3240.64SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LU83_ECTSI1.980e-3043.24SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JFD7_9PHAE1.990e-2638.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNB0_9PHAE5.710e-2536.54SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JWW3_9PHAE2.970e-2443.26MULE domain-containing protein n=2 Tax=Ectocarpus ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007527Zinc finger, SWIM-typePFAMPF04434SWIMcoord: 18..41
e-value: 4.7E-4
score: 19.8
IPR007527Zinc finger, SWIM-typePROSITEPS50966ZF_SWIMcoord: 10..45
score: 8.901567

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9885contigA-nodosum_M_contig9885:2000..2566 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9885.1.1mRNA_A-nodosum_M_contig9885.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig9885 2000..2566 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig9885.1.1 ID=prot_A-nodosum_M_contig9885.1.1|Name=mRNA_A-nodosum_M_contig9885.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=189bp
ENHDGTDKQYVVLGMKDGGHLCSCRTLQELGLCCRHFWAAMRLSRKYKFH
VGILNQHWLAEQGRKPTSEWPEGAKPIWTVAKNHTPLTEEVQALLVSTVG
DGVRLKWNADNTTIESSLMKLKETGPTPQDRRYLYVDCLKEATAAVGLGV
ETVPPDALRALVQQFVQGVNMAGRIGSRTGISVGNPHVV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007527Znf_SWIM