prot_A-nodosum_M_contig9845.1.1 (polypeptide) Ascophyllum nodosum dioecious
You are viewing a polypeptide, more information available on the corresponding mRNA page
Overview
Homology
BLAST of mRNA_A-nodosum_M_contig9845.1.1 vs. uniprot
Match: D8LD43_ECTSI (Small nuclear ribonucleoprotein E n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD43_ECTSI) HSP 1 Score: 80.1 bits (196), Expect = 2.080e-18 Identity = 40/45 (88.89%), Postives = 41/45 (91.11%), Query Frame = 0 Query: 5 IFLFVATQRTRVQIWLYENTKMRIEGQILGFDEYMNLVLDEAEEV 49 IF F+ RTRVQIWLYENTKMRIEGQILGFDEYMNLVLDEAEEV Sbjct: 26 IFRFLQN-RTRVQIWLYENTKMRIEGQILGFDEYMNLVLDEAEEV 69
BLAST of mRNA_A-nodosum_M_contig9845.1.1 vs. uniprot
Match: A0A835YX06_9STRA (Small nuclear ribonucleoprotein E n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX06_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 5.940e-16 Identity = 37/45 (82.22%), Postives = 39/45 (86.67%), Query Frame = 0 Query: 5 IFLFVATQRTRVQIWLYENTKMRIEGQILGFDEYMNLVLDEAEEV 49 IF F+ RTRVQIWLYENT MRIEG+I GFDEYMNLVLDEAEEV Sbjct: 28 IFRFLQN-RTRVQIWLYENTTMRIEGRISGFDEYMNLVLDEAEEV 71
BLAST of mRNA_A-nodosum_M_contig9845.1.1 vs. uniprot
Match: A0A7L1XYB1_9AVES (Small nuclear ribonucleoprotein E (Fragment) n=1 Tax=Thinocorus orbignyianus TaxID=161742 RepID=A0A7L1XYB1_9AVES) HSP 1 Score: 73.6 bits (179), Expect = 7.800e-16 Identity = 30/47 (63.83%), Postives = 38/47 (80.85%), Query Frame = 0 Query: 3 PSIFLFVATQRTRVQIWLYENTKMRIEGQILGFDEYMNLVLDEAEEV 49 P + F+ QR+R+Q+WLYE MRIEG I+GFDEYMNLVLD+AEE+ Sbjct: 22 PVLLFFIILQRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEI 68
BLAST of mRNA_A-nodosum_M_contig9845.1.1 vs. uniprot
Match: R1EMN3_EMIHU (Small nuclear ribonucleoprotein E n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EMN3_EMIHU) HSP 1 Score: 72.8 bits (177), Expect = 1.280e-15 Identity = 34/45 (75.56%), Postives = 41/45 (91.11%), Query Frame = 0 Query: 5 IFLFVATQRTRVQIWLYENTKMRIEGQILGFDEYMNLVLDEAEEV 49 IF F+ +TRVQIWLYENT++RIEG+I+GFDEYMNLVLDEAEE+ Sbjct: 16 IFRFLQN-KTRVQIWLYENTELRIEGKIIGFDEYMNLVLDEAEEL 59
BLAST of mRNA_A-nodosum_M_contig9845.1.1 vs. uniprot
Match: A0A0L0G295_9EUKA (Small nuclear ribonucleoprotein E n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G295_9EUKA) HSP 1 Score: 70.9 bits (172), Expect = 7.000e-15 Identity = 33/50 (66.00%), Postives = 41/50 (82.00%), Query Frame = 0 Query: 1 VLPSIFLFVATQ-RTRVQIWLYENTKMRIEGQILGFDEYMNLVLDEAEEV 49 VLP +F Q + R+Q+WL+EN+ MRIEGQ++GFDEYMNLVLDEAEEV Sbjct: 10 VLPINMVFRLLQSKARIQVWLFENSSMRIEGQLMGFDEYMNLVLDEAEEV 59
BLAST of mRNA_A-nodosum_M_contig9845.1.1 vs. uniprot
Match: A0A7L3KDL0_9PASS (Small nuclear ribonucleoprotein E (Fragment) n=1 Tax=Drymodes brunneopygia TaxID=626378 RepID=A0A7L3KDL0_9PASS) HSP 1 Score: 69.7 bits (169), Expect = 9.410e-15 Identity = 30/43 (69.77%), Postives = 37/43 (86.05%), Query Frame = 0 Query: 7 LFVATQRTRVQIWLYENTKMRIEGQILGFDEYMNLVLDEAEEV 49 LF +QR+R+Q+WLYE MRIEG I+GFDEYMNLVLD+AEE+ Sbjct: 2 LFHHSQRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEI 44
BLAST of mRNA_A-nodosum_M_contig9845.1.1 vs. uniprot
Match: A0A6G1ANE9_CROCR (Small nuclear ribonucleoprotein E (Fragment) n=1 Tax=Crocuta crocuta TaxID=9678 RepID=A0A6G1ANE9_CROCR) HSP 1 Score: 69.7 bits (169), Expect = 1.040e-14 Identity = 31/48 (64.58%), Postives = 39/48 (81.25%), Query Frame = 0 Query: 3 PSIFLFVAT-QRTRVQIWLYENTKMRIEGQILGFDEYMNLVLDEAEEV 49 P +LF+ QR+R+Q+WLYE MRIEG I+GFDEYMNLVLD+AEE+ Sbjct: 1 PLTYLFLQLFQRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEI 48
BLAST of mRNA_A-nodosum_M_contig9845.1.1 vs. uniprot
Match: F4P9I9_BATDJ (Small nuclear ribonucleoprotein E n=3 Tax=Batrachochytrium TaxID=100474 RepID=F4P9I9_BATDJ) HSP 1 Score: 70.5 bits (171), Expect = 1.130e-14 Identity = 31/38 (81.58%), Postives = 37/38 (97.37%), Query Frame = 0 Query: 12 QRTRVQIWLYENTKMRIEGQILGFDEYMNLVLDEAEEV 49 Q++RVQIWLYE T++RIEGQILGFDE+MNLVLD+AEEV Sbjct: 22 QKSRVQIWLYEQTEIRIEGQILGFDEFMNLVLDDAEEV 59
BLAST of mRNA_A-nodosum_M_contig9845.1.1 vs. uniprot
Match: A0A7K7A7F7_9AVES (Small nuclear ribonucleoprotein E (Fragment) n=2 Tax=Nothoprocta TaxID=8806 RepID=A0A7K7A7F7_9AVES) HSP 1 Score: 70.5 bits (171), Expect = 1.130e-14 Identity = 29/41 (70.73%), Postives = 37/41 (90.24%), Query Frame = 0 Query: 9 VATQRTRVQIWLYENTKMRIEGQILGFDEYMNLVLDEAEEV 49 +A+QR+R+Q+WLYE MRIEG I+GFDEYMNLVLD+AEE+ Sbjct: 23 IASQRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEI 63
BLAST of mRNA_A-nodosum_M_contig9845.1.1 vs. uniprot
Match: A0A1D1VCY0_RAMVA (Small nuclear ribonucleoprotein E n=1 Tax=Ramazzottius varieornatus TaxID=947166 RepID=A0A1D1VCY0_RAMVA) HSP 1 Score: 70.5 bits (171), Expect = 1.350e-14 Identity = 30/37 (81.08%), Postives = 35/37 (94.59%), Query Frame = 0 Query: 12 QRTRVQIWLYENTKMRIEGQILGFDEYMNLVLDEAEE 48 ++ RVQ+WLYENTKMRIEG I+GFDEYMNLVLD+AEE Sbjct: 26 EKARVQVWLYENTKMRIEGVIIGFDEYMNLVLDQAEE 62 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9845.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_A-nodosum_M_contig9845.1.1 ID=prot_A-nodosum_M_contig9845.1.1|Name=mRNA_A-nodosum_M_contig9845.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=51bpback to top |