prot_A-nodosum_M_contig98.35.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig98.35.1
Unique Nameprot_A-nodosum_M_contig98.35.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length53
Homology
BLAST of mRNA_A-nodosum_M_contig98.35.1 vs. uniprot
Match: A0A6H5KWL9_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWL9_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 4.560e-9
Identity = 28/38 (73.68%), Postives = 31/38 (81.58%), Query Frame = 0
Query:    1 MLFVIRRLPELAREKRISLYICLIDLTKAYDSVDRTLL 38
            MLFV+RRL EL R +RI LY+C IDL KAYDSVDR LL
Sbjct:   48 MLFVVRRLQELGRRRRIPLYMCFIDLQKAYDSVDRELL 85          
BLAST of mRNA_A-nodosum_M_contig98.35.1 vs. uniprot
Match: A0A6H5KZG0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZG0_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 7.680e-9
Identity = 28/38 (73.68%), Postives = 31/38 (81.58%), Query Frame = 0
Query:    1 MLFVIRRLPELAREKRISLYICLIDLTKAYDSVDRTLL 38
            MLFV+RRL EL R +RI LY+C IDL KAYDSVDR LL
Sbjct:   72 MLFVVRRLQELGRRRRIPLYMCFIDLQKAYDSVDRELL 109          
BLAST of mRNA_A-nodosum_M_contig98.35.1 vs. uniprot
Match: A0A6H5K856_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K856_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 8.550e-9
Identity = 26/38 (68.42%), Postives = 31/38 (81.58%), Query Frame = 0
Query:    1 MLFVIRRLPELAREKRISLYICLIDLTKAYDSVDRTLL 38
            MLFV+RRL EL R K+I LY+C +DL KAYDSVDR +L
Sbjct:    1 MLFVLRRLQELGRRKKIPLYMCFVDLNKAYDSVDREML 38          
BLAST of mRNA_A-nodosum_M_contig98.35.1 vs. uniprot
Match: A0A6H5L5Y6_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Y6_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 1.540e-8
Identity = 28/38 (73.68%), Postives = 31/38 (81.58%), Query Frame = 0
Query:    1 MLFVIRRLPELAREKRISLYICLIDLTKAYDSVDRTLL 38
            MLFV+RRL EL R +RI LY+C IDL KAYDSVDR LL
Sbjct:   84 MLFVVRRLQELGRRRRIPLYMCFIDLQKAYDSVDRELL 121          
BLAST of mRNA_A-nodosum_M_contig98.35.1 vs. uniprot
Match: A0A6H5KQ53_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ53_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 1.590e-8
Identity = 27/38 (71.05%), Postives = 31/38 (81.58%), Query Frame = 0
Query:    1 MLFVIRRLPELAREKRISLYICLIDLTKAYDSVDRTLL 38
            MLFV+RRL EL R K+I LY+C +DL KAYDSVDR LL
Sbjct:   59 MLFVVRRLQELGRRKKIPLYMCFVDLNKAYDSVDRQLL 96          
BLAST of mRNA_A-nodosum_M_contig98.35.1 vs. uniprot
Match: A0A6H5J6Q0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6Q0_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 1.720e-8
Identity = 28/38 (73.68%), Postives = 31/38 (81.58%), Query Frame = 0
Query:    1 MLFVIRRLPELAREKRISLYICLIDLTKAYDSVDRTLL 38
            MLFV+RRL EL R +RI LY+C IDL KAYDSVDR LL
Sbjct:   87 MLFVVRRLQELGRRRRIPLYMCFIDLQKAYDSVDRELL 124          
BLAST of mRNA_A-nodosum_M_contig98.35.1 vs. uniprot
Match: A0A6H5JE46_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE46_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 2.490e-8
Identity = 28/38 (73.68%), Postives = 31/38 (81.58%), Query Frame = 0
Query:    1 MLFVIRRLPELAREKRISLYICLIDLTKAYDSVDRTLL 38
            MLFV+RRL EL R +RI LY+C IDL KAYDSVDR LL
Sbjct:   98 MLFVVRRLQELGRRRRIPLYMCFIDLQKAYDSVDRELL 135          
BLAST of mRNA_A-nodosum_M_contig98.35.1 vs. uniprot
Match: A0A6H5KLC1_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLC1_9PHAE)

HSP 1 Score: 55.8 bits (133), Expect = 3.390e-8
Identity = 26/38 (68.42%), Postives = 31/38 (81.58%), Query Frame = 0
Query:    1 MLFVIRRLPELAREKRISLYICLIDLTKAYDSVDRTLL 38
            MLFV+RRL EL R K+I LY+C +DL KAYDSVDR +L
Sbjct:  125 MLFVVRRLQELGRRKKIPLYMCFVDLNKAYDSVDREML 162          
BLAST of mRNA_A-nodosum_M_contig98.35.1 vs. uniprot
Match: A0A6H5KT29_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT29_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 3.420e-8
Identity = 28/38 (73.68%), Postives = 31/38 (81.58%), Query Frame = 0
Query:    1 MLFVIRRLPELAREKRISLYICLIDLTKAYDSVDRTLL 38
            MLFV+RRL EL R +RI LY+C IDL KAYDSVDR LL
Sbjct:  155 MLFVVRRLQELGRRRRIPLYMCFIDLQKAYDSVDRELL 192          
BLAST of mRNA_A-nodosum_M_contig98.35.1 vs. uniprot
Match: A0A6H5K615_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K615_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 3.660e-8
Identity = 28/38 (73.68%), Postives = 31/38 (81.58%), Query Frame = 0
Query:    1 MLFVIRRLPELAREKRISLYICLIDLTKAYDSVDRTLL 38
            MLFV+RRL EL R +RI LY+C IDL KAYDSVDR LL
Sbjct:  153 MLFVVRRLQELGRRRRIPLYMCFIDLQKAYDSVDRELL 190          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig98.35.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KWL9_9PHAE4.560e-973.68Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KZG0_9PHAE7.680e-973.68Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K856_9PHAE8.550e-968.42Reverse transcriptase domain-containing protein (F... [more]
A0A6H5L5Y6_9PHAE1.540e-873.68Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KQ53_9PHAE1.590e-871.05Reverse transcriptase domain-containing protein n=... [more]
A0A6H5J6Q0_9PHAE1.720e-873.68Reverse transcriptase domain-containing protein (F... [more]
A0A6H5JE46_9PHAE2.490e-873.68Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KLC1_9PHAE3.390e-868.42Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KT29_9PHAE3.420e-873.68Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K615_9PHAE3.660e-873.68Reverse transcriptase domain-containing protein (F... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig98contigA-nodosum_M_contig98:326907..327065 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig98.35.1mRNA_A-nodosum_M_contig98.35.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig98 326907..327233 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig98.35.1 ID=prot_A-nodosum_M_contig98.35.1|Name=mRNA_A-nodosum_M_contig98.35.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=53bp
MLFVIRRLPELAREKRISLYICLIDLTKAYDSVDRTLLTRTHFLCSVDHE
QD*
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