prot_A-nodosum_M_contig98.28.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig98.28.1
Unique Nameprot_A-nodosum_M_contig98.28.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length200
Homology
BLAST of mRNA_A-nodosum_M_contig98.28.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 9.150e-25
Identity = 65/173 (37.57%), Postives = 90/173 (52.02%), Query Frame = 0
Query:    7 RGGELGKQVVQYIVDSATTCNMTPDADGLINYRECSRPLGLVNRRTTSIAGYGDLTVAFRSDKGWVHVKLHDVAYAPLLSYTLISLPYLALKR-HTYAGDKDGVTLKLKGGKTVHCALIRRLCRQYGYHQEAKGRVVDTACAVTAPGQAKAPTTPTDIDTFHCTYDHTHEVLL 178
            RGG    +  +Y+ D+  T +M  ++DG + Y EC R + +    T  I GYGD+TV   S  G   + L  VA+ P L Y L+SL  L      T   +K  + L+  GG+ V+      L  Q G+         + ACA  APG AKAP+TP DI+ FHC + H+HEVLL
Sbjct:  358 RGGVEQARRGRYVADTGATTHMFANSDGFVRYEECDRRVRVAAGETFPIVGYGDVTVTLSSRDGTTDLLLKRVAHVPRLDYNLVSLTSLFDDGFETKTLNKHELELERGGGEVVYFPRCGNLYVQNGFRTHT-----EHACAAIAPGNAKAPSTPVDINDFHCAHGHSHEVLL 525          
BLAST of mRNA_A-nodosum_M_contig98.28.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 9.180e-25
Identity = 65/173 (37.57%), Postives = 90/173 (52.02%), Query Frame = 0
Query:    7 RGGELGKQVVQYIVDSATTCNMTPDADGLINYRECSRPLGLVNRRTTSIAGYGDLTVAFRSDKGWVHVKLHDVAYAPLLSYTLISLPYLALKR-HTYAGDKDGVTLKLKGGKTVHCALIRRLCRQYGYHQEAKGRVVDTACAVTAPGQAKAPTTPTDIDTFHCTYDHTHEVLL 178
            RGG    +  +Y+ D+  T +M  ++DG + Y EC R + +    T  I GYGD+TV   S  G   + L  VA+ P L Y L+SL  L      T   +K  + L+  GG+ V+      L  Q G+         + ACA  APG AKAP+TP DI+ FHC + H+HEVLL
Sbjct:  371 RGGVEQARRGRYVADTGATTHMFANSDGFVRYEECDRRVRVAAGETFPIVGYGDVTVTLSSRDGTTDLLLKRVAHVPRLDYNLVSLTSLFDDGFETKTLNKHELELERGGGEVVYFPRCGNLYVQNGFRTHT-----EHACAAIAPGNAKAPSTPVDINDFHCAHGHSHEVLL 538          
BLAST of mRNA_A-nodosum_M_contig98.28.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 9.220e-25
Identity = 65/173 (37.57%), Postives = 90/173 (52.02%), Query Frame = 0
Query:    7 RGGELGKQVVQYIVDSATTCNMTPDADGLINYRECSRPLGLVNRRTTSIAGYGDLTVAFRSDKGWVHVKLHDVAYAPLLSYTLISLPYLALKR-HTYAGDKDGVTLKLKGGKTVHCALIRRLCRQYGYHQEAKGRVVDTACAVTAPGQAKAPTTPTDIDTFHCTYDHTHEVLL 178
            RGG    +  +Y+ D+  T +M  ++DG + Y EC R + +    T  I GYGD+TV   S  G   + L  VA+ P L Y L+SL  L      T   +K  + L+  GG+ V+      L  Q G+         + ACA  APG AKAP+TP DI+ FHC + H+HEVLL
Sbjct:  514 RGGVEQARRGRYVADTGATTHMFANSDGFVRYEECDRRVRVAAGETFPIVGYGDVTVTLSSRDGTTDLLLKRVAHVPRLDYNLVSLTSLFDDGFETKTLNKHELELERGGGEVVYFPRCGNLYVQNGFRTHT-----EHACAAIAPGNAKAPSTPVDINDFHCAHGHSHEVLL 681          
BLAST of mRNA_A-nodosum_M_contig98.28.1 vs. uniprot
Match: A0A6H5K4H5_9PHAE (CCHC-type domain-containing protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4H5_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 1.040e-23
Identity = 67/184 (36.41%), Postives = 100/184 (54.35%), Query Frame = 0
Query:    7 RGGELGKQVVQYIVDSATTCNMTPDADGLINYRECSRPLGLV-NRRTTSIAGYGDLTVAFRSDKGWVHVKLHDVAYAPLLSYTLISLPYLALK-RHTYAGDKDGVTLKLKGGKTVHCALIRRLCRQYGYHQEAKGRVVDTACAVTAPGQAKAPTTPTDIDTFHCTYDHTHEVLLNKRRSNKELT 188
            RGG    +  +++ D+  T +M P A+   NY EC R L +   ++  +I GYGD+ V   S  G   + L  VA+ P L+Y L+SL  L  + +   A D+  + + + GG++V+  L   L  Q G H+   GR  + ACA+ APG AKA  TP DI+ FHC + H+HEVLL      + +T
Sbjct:  469 RGGVEQARQERFVADTGATNHMFPSANAFENYHECDRRLSVAAGKQAFAIVGYGDVRVTIGSRVGTTDLLLKRVAHVPELNYNLVSLTALLKQTKGRLAADERELEVFVGGGESVYFPLWGDLFVQTG-HRIDSGR--ELACAIIAPGNAKANRTPVDINDFHCAHGHSHEVLLKNTAKQQGVT 649          
BLAST of mRNA_A-nodosum_M_contig98.28.1 vs. uniprot
Match: A0A6H5L715_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L715_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 1.070e-23
Identity = 67/184 (36.41%), Postives = 100/184 (54.35%), Query Frame = 0
Query:    7 RGGELGKQVVQYIVDSATTCNMTPDADGLINYRECSRPLGLV-NRRTTSIAGYGDLTVAFRSDKGWVHVKLHDVAYAPLLSYTLISLPYLALK-RHTYAGDKDGVTLKLKGGKTVHCALIRRLCRQYGYHQEAKGRVVDTACAVTAPGQAKAPTTPTDIDTFHCTYDHTHEVLLNKRRSNKELT 188
            RGG    +  +++ D+  T +M P A+   NY EC R L +   ++  +I GYGD+ V   S  G   + L  VA+ P L+Y L+SL  L  + +   A D+  + + + GG++V+  L   L  Q G H+   GR  + ACA+ APG AKA  TP DI+ FHC + H+HEVLL      + +T
Sbjct:  849 RGGVEQARQERFVADTGATNHMFPSANAFENYHECDRRLSVAAGKQAFAIVGYGDVRVTIGSRVGTTDLLLKRVAHVPELNYNLVSLTALLKQTKGRLAADERELEVFVGGGESVYFPLWGDLFVQTG-HRIDSGR--ELACAIIAPGNAKANRTPVDINDFHCAHGHSHEVLLKNTAKQQGVT 1029          
BLAST of mRNA_A-nodosum_M_contig98.28.1 vs. uniprot
Match: A0A6H5JNN1_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNN1_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 1.090e-23
Identity = 67/184 (36.41%), Postives = 100/184 (54.35%), Query Frame = 0
Query:    7 RGGELGKQVVQYIVDSATTCNMTPDADGLINYRECSRPLGLV-NRRTTSIAGYGDLTVAFRSDKGWVHVKLHDVAYAPLLSYTLISLPYLALK-RHTYAGDKDGVTLKLKGGKTVHCALIRRLCRQYGYHQEAKGRVVDTACAVTAPGQAKAPTTPTDIDTFHCTYDHTHEVLLNKRRSNKELT 188
            RGG    +  +++ D+  T +M P A+   NY EC R L +   ++  +I GYGD+ V   S  G   + L  VA+ P L+Y L+SL  L  + +   A D+  + + + GG++V+  L   L  Q G H+   GR  + ACA+ APG AKA  TP DI+ FHC + H+HEVLL      + +T
Sbjct:  947 RGGVEQARQERFVADTGATNHMFPSANAFENYHECDRRLSVAAGKQAFAIVGYGDVRVTIGSRVGTTDLLLKRVAHVPELNYNLVSLTALLKQTKGRLAADERELEVFVGGGESVYFPLWGDLFVQTG-HRINSGR--ELACAIIAPGNAKANRTPVDINDFHCAHGHSHEVLLKNTAKQQGVT 1127          
BLAST of mRNA_A-nodosum_M_contig98.28.1 vs. uniprot
Match: A0A6H5L142_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L142_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 1.570e-23
Identity = 64/173 (36.99%), Postives = 89/173 (51.45%), Query Frame = 0
Query:    7 RGGELGKQVVQYIVDSATTCNMTPDADGLINYRECSRPLGLVNRRTTSIAGYGDLTVAFRSDKGWVHVKLHDVAYAPLLSYTLISLPYLALKR-HTYAGDKDGVTLKLKGGKTVHCALIRRLCRQYGYHQEAKGRVVDTACAVTAPGQAKAPTTPTDIDTFHCTYDHTHEVLL 178
            RGG    +  +Y+ D+  T +M  ++DG + Y EC R + +    T  I GYGD+TV   S  G   + L  VA+ P L Y L+SL  L      T   +K  + L+  GG+ V+      L  Q G+         + A A  APG AKAP+TP DI+ FHC + H+HEVLL
Sbjct:  223 RGGVEQARRGRYVADTGATTHMFANSDGFVRYEECDRRVRVAAGETFPIVGYGDVTVTLSSRDGTTDLLLKRVAHVPRLDYNLVSLTSLFDDGFETKTLNKHELELERGGGEVVYFPRCGNLYVQNGFRTHT-----ERARAAIAPGNAKAPSTPVDINDFHCAHGHSHEVLL 390          
BLAST of mRNA_A-nodosum_M_contig98.28.1 vs. uniprot
Match: A0A6H5KFZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFZ8_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 1.720e-23
Identity = 67/184 (36.41%), Postives = 99/184 (53.80%), Query Frame = 0
Query:    7 RGGELGKQVVQYIVDSATTCNMTPDADGLINYRECSRPLGLV-NRRTTSIAGYGDLTVAFRSDKGWVHVKLHDVAYAPLLSYTLISLPYLALK-RHTYAGDKDGVTLKLKGGKTVHCALIRRLCRQYGYHQEAKGRVVDTACAVTAPGQAKAPTTPTDIDTFHCTYDHTHEVLLNKRRSNKELT 188
            RGG    +  +++ D+  T +M P A+   NY EC R L +   ++  +I GYGD+ V   S  G   + L  VA+ P L Y L+SL  L  + +   A D+  + + + GG++V+  L   L  Q G H+   GR  + ACA+ APG AKA  TP DI+ FHC + H+HEVLL      + +T
Sbjct:  312 RGGVEQARQERFVADTGATNHMFPSANAFENYHECDRRLSVAAGKQAFAIVGYGDVRVTIGSRVGTTDLLLKRVAHVPELIYNLVSLTALLKQTKGRLAADERELEVFVGGGESVYFPLWGDLFVQTG-HRIDSGR--ELACAIIAPGNAKANRTPVDINDFHCAHGHSHEVLLKNTAKQQGVT 492          
BLAST of mRNA_A-nodosum_M_contig98.28.1 vs. uniprot
Match: A0A6H5KPC5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPC5_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 2.480e-23
Identity = 66/184 (35.87%), Postives = 100/184 (54.35%), Query Frame = 0
Query:    7 RGGELGKQVVQYIVDSATTCNMTPDADGLINYRECSRPLGLV-NRRTTSIAGYGDLTVAFRSDKGWVHVKLHDVAYAPLLSYTLISLPYLALK-RHTYAGDKDGVTLKLKGGKTVHCALIRRLCRQYGYHQEAKGRVVDTACAVTAPGQAKAPTTPTDIDTFHCTYDHTHEVLLNKRRSNKELT 188
            RGG    +  +++ D+  T +M P A+   NY EC R L +   ++  +I GYGD+ V   S  G   + L  VA+ P L+Y L+SL  L  + +   A D+  + + + GG++V+  L   L  Q   H++  GR  + ACA+ APG AKA  TP DI+ FHC + H+HEVLL      + +T
Sbjct:  271 RGGVEQARQERFVADTGATNHMFPSANAFENYHECDRRLSVAAGKQAFAIVGYGDVRVTIGSRVGTTDLLLKRVAHVPELNYNLVSLTALLKQTKGRLAADERELEVFVGGGESVYFPLWGDLFVQTS-HRKDSGR--ELACAMIAPGNAKANRTPVDINDFHCAHGHSHEVLLKNTAKQQGVT 451          
BLAST of mRNA_A-nodosum_M_contig98.28.1 vs. uniprot
Match: A0A6H5LGF7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LGF7_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 1.280e-22
Identity = 65/174 (37.36%), Postives = 95/174 (54.60%), Query Frame = 0
Query:    7 RGGELGKQVVQYIVDSATTCNMTPDADGLINYRECSRPLGLV-NRRTTSIAGYGDLTVAFRSDKGWVHVKLHDVAYAPLLSYTLISLPYLALK-RHTYAGDKDGVTLKLKGGKTVHCALIRRLCRQYGYHQEAKGRVVDTACAVTAPGQAKAPTTPTDIDTFHCTYDHTHEVLL 178
            RGG    +  +++ D+    +M P A+   NY EC R L +   ++  +I GYGD+ V   S  G   + L  VA+ P L+Y L+SL  L  + +   A D+  + + + GG+ V+  L   L  Q G H+   GR  + ACA+ APG AKA  TP DI+ FHC + H+HEVLL
Sbjct:  469 RGGVEQARQERFVADTGAPNHMFPRANAFENYHECDRRLSVAAGKQAFAIVGYGDVRVTIGSRVGTTDLLLKRVAHVPELNYNLVSLTALLKQTKGRLAADERELEVFVGGGEPVYFPLWGELFVQTG-HRIGSGR--ELACAIIAPGNAKANRTPVDINDFHCAHGHSHEVLL 639          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig98.28.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
A0A6H5JZQ8_9PHAE9.150e-2537.57Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN00_9PHAE9.180e-2537.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE9.220e-2537.57Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]
A0A6H5K4H5_9PHAE1.040e-2336.41CCHC-type domain-containing protein n=11 Tax=Ectoc... [more]
A0A6H5L715_9PHAE1.070e-2336.41CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JNN1_9PHAE1.090e-2336.41CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L142_9PHAE1.570e-2336.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFZ8_9PHAE1.720e-2336.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KPC5_9PHAE2.480e-2335.87Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5LGF7_9PHAE1.280e-2237.36Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig98contigA-nodosum_M_contig98:233009..233608 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig98.28.1mRNA_A-nodosum_M_contig98.28.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig98 232880..233650 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig98.28.1 ID=prot_A-nodosum_M_contig98.28.1|Name=mRNA_A-nodosum_M_contig98.28.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=200bp
MVEEEVRGGELGKQVVQYIVDSATTCNMTPDADGLINYRECSRPLGLVNR
RTTSIAGYGDLTVAFRSDKGWVHVKLHDVAYAPLLSYTLISLPYLALKRH
TYAGDKDGVTLKLKGGKTVHCALIRRLCRQYGYHQEAKGRVVDTACAVTA
PGQAKAPTTPTDIDTFHCTYDHTHEVLLNKRRSNKELTSAANSKNAGCI*
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