prot_A-nodosum_M_contig98.12.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig98.12.1
Unique Nameprot_A-nodosum_M_contig98.12.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length995
Homology
BLAST of mRNA_A-nodosum_M_contig98.12.1 vs. uniprot
Match: D8LK34_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK34_ECTSI)

HSP 1 Score: 834 bits (2154), Expect = 1.370e-287
Identity = 535/1005 (53.23%), Postives = 626/1005 (62.29%), Query Frame = 0
Query:    1 MVVDLLAASRRPLQKLLHDCRFSEWENIALFLDSGATEAVRWAGGLGYILSELGISVVVDLQAFAPGRGRADRAPGSDNITRGIFLVTTFIWDVEGAILNAAKTYGLTEVNVACSVSEDAHACHPHASHISEETSGRVSFADISQQLNVTLVRMLKIETQSNSSRFRSGGFPSDASSFTFDVEGPFALSP-AVPH--HREPPPTVLVSVLHSPLHMGCFLQCPPC----------PNRPTDYEEQGERQR-CPAFSLASPACAGTFPLRRCDIGGIGGAGAALLSAAGAVEGKGEGI----SEGRILAEEVPRDERLRYRLLAHVLAEVLWEQLLLDVSGGGGVFTLGSTSHLIGTTLVAAAEEMKRSFLSK-------AEGSGEDFT-GRGGSGGSE-----KRREAAVVLVDRTLDLAVAASRGGSLLQRILSSLSRTGTSTTA----PTSPSVA--DWSPMASAHQQDVGVILPALAPGLGVPAPAAGSPTGLSNLNVDNNTASGGGVDGGGRPTASAETREEEGGMDEAGYRAGMPRLRAMKALATLAWPAPPSLCHPG--SAAAERAVHGMACLDEENGQAGLVSALERCISDHGCVPPPRKRRGMGSSIMALVTSLARGNPRSGGLTGDQVCFRCRGVVQVALAAMEAHQRTSALAGSSWLETVTAERVQRQELRDGGTSQEVMEQLCATLRSSKP--------------TSSGVGEAEAGLENR-ALLMALRGVSLAGGSIGADEASSFRKAWVTRMLTCCSQGEGSGLPADVVEIFERLPSLRRR------DAAKEVKHYRKEEGGARLELEDMARERIQRLREAAGSRS-HLTSPA-LRDLALQPYTFVASAAP------------------------GTEDGGQHDRLGEGVGXXXXXXXXXXXXXXXXXXXXXXXSMGRSASVEHTTECDTLVGRLAGLMLDRTRSTVDNTVPDLQESKLMSAASVGLGLLSSGLKKFARIRTGGVLGNRKKHR 919
            M VDLLAASRRPL++LLH+C FS+WENIALFLD GATEAVRWAGGLG++L ELGIS ++DLQAFAPGR      P S+ +TRGIFLVT F+WDVEGA+L+AA TYGLTEV +ACSVSE+AHACH HA+HISEET GR SFA +SQQL V+L RMLKI+ QS+SS  R    PS +S+          ++  A PH       PTVLV++ HSPLH+GCF Q               ++P D   QG+ Q+ C AFSLASPACA  FPLRRCD  G                          + G + AEEVPR ERLRYRLLAH L E LW+QLLLDVSGGGGVFTLG TS LIGTT+ A AE++KR  L +        EG  +  + GRGG  GS+      RREA+VVL+DR LD+A AAS GGSLLQRILSS+ RTGT  +A    P+SP     DWSP A+AHQQDVGV+LP L PGLG+PA AA                             S                   PRL AMKAL+   W APPSLCH G  + AA   VH MAC  EE GQA L+SALE+C+SD+GCVPPPRKRRGMGSSIMALVTSLARGNPR+GGL+GD+VCF+ RGV+QVALAAMEAHQRTS+LAGS W ETV AERVQ ++LRDG T   VMEQLCATL  + P               S G G A  G   R ALL+ALRGVSLAG SIGA +A+SFRKAW++RML    +  GSG+PA V E  +++ S +R        AA+ V     EE G  LELED+ARER QRLRE A SRS HL S A LRDL  +PYTFVASA                          G +D G+ D  GEG                         +    +  EHT ECDTLVGRLAGL+LDRTR      VPDL E+K++S ASVGLGLLSSGLKK  R+   G   +R +H+
Sbjct:    1 MAVDLLAASRRPLERLLHECSFSQWENIALFLDEGATEAVRWAGGLGFVLEELGISHILDLQAFAPGRS-PPAVPESEGLTRGIFLVTNFVWDVEGAVLHAACTYGLTEVALACSVSEEAHACHSHAAHISEETGGRASFAVVSQQLKVSLERMLKIKAQSSSSGRRRFSKPSPSSTXXXXXXXTQTIATEAAPHLAANAVDPTVLVTIKHSPLHVGCFFQASTTITSGGGSSVDVDQPLD--SQGQHQKGCSAFSLASPACARVFPLRRCDWEGXXXXXXXXXXXXXXXXXXXXXXXXXETRGHVSAEEVPRGERLRYRLLAHTLVEALWDQLLLDVSGGGGVFTLGDTSRLIGTTVAAVAEDLKRVSLERPAPPGFGGEGGADSASSGRGGGFGSDGAGPAARREASVVLIDRNLDVAAAASHGGSLLQRILSSIDRTGTPNSAVPATPSSPEAVAIDWSPSAAAHQQDVGVVLPMLTPGLGLPARAAAV-------------------------ERSGXXXXXXXXXXXXXXXGKPPRLLAMKALSGFPWRAPPSLCHSGGDAGAAAGVVHAMACHGEEEGQAALISALEKCVSDNGCVPPPRKRRGMGSSIMALVTSLARGNPRAGGLSGDRVCFKSRGVLQVALAAMEAHQRTSSLAGSGWSETVAAERVQLRQLRDGSTVDVVMEQLCATLNRAPPMDFSSSSSSPPGGTASLGAGAARTGSSAREALLLALRGVSLAGESIGAQDATSFRKAWISRMLAGGFREGGSGVPAGVAEAVDQIRSRKRERTTAPEPAAESVGTGEVEEAGVLLELEDIARERTQRLREVASSRSFHLKSTAVLRDLGFEPYTFVASATAXXXXXXXXXXXXXXXXXXXXXXEEGWDDWGE-DEAGEGT--------------------PGVANDDGGSRTEHTAECDTLVGRLAGLLLDRTRP----DVPDLYEAKVVSPASVGLGLLSSGLKKLGRMGGAGGGVHRGRHK 952          
BLAST of mRNA_A-nodosum_M_contig98.12.1 vs. uniprot
Match: A0A6A3JAG4_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3JAG4_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 3.520e-11
Identity = 111/386 (28.76%), Postives = 154/386 (39.90%), Query Frame = 0
Query:   33 DSGATEAVRWAGGLGYILSELGISVVVDLQAFAPGRGRAD-RA----PGSDNITRGIFLVTTFIWDVEGAILNAAKTYGLTEVNVACSVSEDAHACHPHASHISEETSGRVSFADISQQLNVTLVRMLKIETQSNSSRFRSGGFPSDASSFTFDVEGPFALSPAVPHHREPPPTVLVSVLHSPLHMGCFLQCPPCPNRPTDYEEQGERQRCPAFSLASPACAGTFPLRRCDIGGIGGAGAALLSAAGAVEGKGEGISEGRILAEEVPRDERLRYRLLAHVLAEVLWEQLLLDVSGGGGVFTLGSTSHLIGTTLVAAAEEMKRSFLSKAEGSGEDFTGRGGSGGSEKRREAAVVLVDRTLDLAVAASRGGSLLQRILSSLSRTGTST 413
            +SG  E++RWAG L  +L +LG+  V+  +        A  RA      ++++   + L++ F+WD E A+           V V  S+SE AH C+            R   A   +     L + L   TQ N  +        DA     DVE                    V VLH PL++   L      N+    E          F L+   CA  FPL    +     +  +  +   A EG  +  +   +L   +P   R   RLLA+ LAEV     L DV     +F LG+TS  IG TL+    EM+           E   GR G         AA+V+VDRT DLA   S G SLL RIL+ L +T T T
Sbjct:   30 ESGCVESLRWAGALPLLLRDLGVCNVLAAERLLECASAAQLRALLLLDENESVGHLVLLLSGFLWDYEAALTRLLALGVARRVTVCSSLSERAHECYDFGGG-GGAAGARAPNAMKFEAFAAELGKKLVTPTQ-NGPKSEEEWDWDDA-----DVERSG-----------------VQVLHLPLNVVPLLS-----NKTPTPEPS-------VFVLSHATCAAAFPLLLHQVEDAAASPTSPTNRGTATEGLNKYKNVRDVLPVHIPSAFRRAMRLLAYTLAEVTLGARL-DVKER--IFALGATSLKIGHTLLRILNEMQEE---------ETLQGRQG---------AALVIVDRTSDLATPCSFGSSLLDRILALLPQTPTQT 358          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig98.12.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LK34_ECTSI1.370e-28753.23Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6A3JAG4_9STRA3.520e-1128.76Uncharacterized protein n=5 Tax=Phytophthora TaxID... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 807..824
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 799..833
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 457..496
IPR036045Sec1-like superfamilySUPERFAMILY56815Sec1/munc18-like (SM) proteinscoord: 897..982

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig98contigA-nodosum_M_contig98:158219..169040 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig98.12.1mRNA_A-nodosum_M_contig98.12.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig98 157580..169142 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig98.12.1 ID=prot_A-nodosum_M_contig98.12.1|Name=mRNA_A-nodosum_M_contig98.12.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=995bp
MVVDLLAASRRPLQKLLHDCRFSEWENIALFLDSGATEAVRWAGGLGYIL
SELGISVVVDLQAFAPGRGRADRAPGSDNITRGIFLVTTFIWDVEGAILN
AAKTYGLTEVNVACSVSEDAHACHPHASHISEETSGRVSFADISQQLNVT
LVRMLKIETQSNSSRFRSGGFPSDASSFTFDVEGPFALSPAVPHHREPPP
TVLVSVLHSPLHMGCFLQCPPCPNRPTDYEEQGERQRCPAFSLASPACAG
TFPLRRCDIGGIGGAGAALLSAAGAVEGKGEGISEGRILAEEVPRDERLR
YRLLAHVLAEVLWEQLLLDVSGGGGVFTLGSTSHLIGTTLVAAAEEMKRS
FLSKAEGSGEDFTGRGGSGGSEKRREAAVVLVDRTLDLAVAASRGGSLLQ
RILSSLSRTGTSTTAPTSPSVADWSPMASAHQQDVGVILPALAPGLGVPA
PAAGSPTGLSNLNVDNNTASGGGVDGGGRPTASAETREEEGGMDEAGYRA
GMPRLRAMKALATLAWPAPPSLCHPGSAAAERAVHGMACLDEENGQAGLV
SALERCISDHGCVPPPRKRRGMGSSIMALVTSLARGNPRSGGLTGDQVCF
RCRGVVQVALAAMEAHQRTSALAGSSWLETVTAERVQRQELRDGGTSQEV
MEQLCATLRSSKPTSSGVGEAEAGLENRALLMALRGVSLAGGSIGADEAS
SFRKAWVTRMLTCCSQGEGSGLPADVVEIFERLPSLRRRDAAKEVKHYRK
EEGGARLELEDMARERIQRLREAAGSRSHLTSPALRDLALQPYTFVASAA
PGTEDGGQHDRLGEGVGRGGGEEDGWDDWGEEHSDGDVDGSMGRSASVEH
TTECDTLVGRLAGLMLDRTRSTVDNTVPDLQESKLMSAASVGLGLLSSGL
KKFARIRTGGVLGNRKKHRPTDRAVVVIFVVGGFTPLELAEVNGVVRCAA
AAASAAGGPDGVDTEVIVAGTTISTPDIVYHQIFGRPPLEQTYE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036045Sec1-like_sf